BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,317,837	T→C	A4A (GCA→GCG)	rcsC ←	RcsC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,317,837	0	T	C	99.7%	1108.4 / NA	338	A4A (GCA→GCG)	rcsC	RcsC
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (174/163); minor base G (1/0); total (175/163)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 342 total aligned reads displayed.

CTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAATGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGAT  >  NC_000913/2317747‑2317926

cTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGc                                                                                         <  2:4218953/93‑1 (MQ=255)

cTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGc                                                                                         <  2:1837839/93‑1 (MQ=255)

cTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGc                                                                                         >  1:832931/1‑93 (MQ=255)

cTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGc                                                                                         <  2:111740/93‑1 (MQ=255)

 tGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGct                                                                                        <  2:5102611/93‑1 (MQ=255)

 tGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGct                                                                                        >  1:5846639/1‑93 (MQ=255)

 tGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGct                                                                                        >  2:2106628/1‑93 (MQ=255)

 tGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGct                                                                                        >  1:6539168/1‑93 (MQ=255)

  gACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGctc                                                                                       <  1:2197977/93‑1 (MQ=255)

  gACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGctc                                                                                       >  1:4666667/1‑93 (MQ=255)

   aCGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGctct                                                                                      >  1:1725570/1‑93 (MQ=255)

   aCGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGctct                                                                                      <  1:5953884/93‑1 (MQ=255)

    cGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTg                                                                                     <  1:6664941/93‑1 (MQ=255)

       aTTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAAc                                                                                  >  1:873344/1‑93 (MQ=255)

       aTTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAAc                                                                                  >  2:4401057/1‑93 (MQ=255)

         ttCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACAt                                                                                >  1:1924327/1‑93 (MQ=255)

         ttCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACAt                                                                                <  1:3060425/93‑1 (MQ=255)

         ttCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACAt                                                                                <  1:6387055/93‑1 (MQ=255)

         ttCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACAt                                                                                >  2:2427415/1‑93 (MQ=255)

           ccGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGt                                                                              >  1:4454113/1‑93 (MQ=255)

            cGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGTAAAAGCAATCAACAGCCAGAGCACTAACGTCAACGCTCTGAACATGTa                                                                             >  1:6728411/1‑93 (MQ=255)

            cGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTa                                                                             <  1:111901/93‑1 (MQ=255)

            cGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTa                                                                             <  1:2982140/93‑1 (MQ=255)

              aTTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGATCATGTAgc                                                                           <  1:6525263/93‑1 (MQ=255)

              aTTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAgc                                                                           <  1:4956332/93‑1 (MQ=255)

               ttCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAgcg                                                                          >  2:2989823/1‑93 (MQ=255)

               ttCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAgcg                                                                          >  2:1672574/1‑93 (MQ=255)

                  tcGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGa                                                                       >  2:2596957/1‑93 (MQ=255)

                   cGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAg                                                                      <  2:6065292/93‑1 (MQ=255)

                    gCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAgg                                                                     >  2:1779555/1‑93 (MQ=255)

                     cTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGc                                                                    <  1:1257951/93‑1 (MQ=255)

                      tGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCt                                                                   <  2:476210/93‑1 (MQ=255)

                      tGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCt                                                                   <  1:3997946/93‑1 (MQ=255)

                      tGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCt                                                                   >  1:3169250/1‑93 (MQ=255)

                        aTGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCttt                                                                 >  2:499584/1‑93 (MQ=255)

                          gTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCa                                                               >  1:3852012/1‑93 (MQ=255)

                            aaCGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAgg                                                             <  2:3823454/93‑1 (MQ=255)

                            aaCGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAgg                                                             >  1:4188281/1‑93 (MQ=255)

                             aCGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAggg                                                            <  2:4578790/93‑1 (MQ=255)

                               gCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGtt                                                          <  2:5636191/93‑1 (MQ=255)

                               gCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGtt                                                          <  1:3495119/93‑1 (MQ=255)

                               gCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGtt                                                          >  2:837041/1‑93 (MQ=255)

                                cATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTg                                                         <  2:5599021/93‑1 (MQ=255)

                                 aTTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGt                                                        <  1:1541906/93‑1 (MQ=255)

                                   tAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTAc                                                      <  2:5924472/93‑1 (MQ=255)

                                   tAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTAc                                                      <  2:1181353/93‑1 (MQ=255)

                                   tAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTAc                                                      <  2:1473635/93‑1 (MQ=255)

                                     aCGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGa                                                    <  2:2467451/93‑1 (MQ=255)

                                        aTGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGaaaa                                                 <  1:5712065/93‑1 (MQ=255)

                                        aTGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGaaaa                                                 <  2:2003271/93‑1 (MQ=255)

                                          gTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAaaga                                               >  2:6466130/1‑93 (MQ=255)

                                           tAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAaagaa                                              <  1:5754983/93‑1 (MQ=255)

                                           tAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAaagaa                                              <  2:3087061/93‑1 (MQ=255)

                                            aaaaaaCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAaagaag                                             <  2:2512806/93‑1 (MQ=255)

                                               aaaCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCaa                                          <  2:3925863/93‑1 (MQ=255)

                                                aaCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAg                                         <  1:1967515/93‑1 (MQ=255)

                                                aaCGAAGGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACAGGTAGCGCGAGGCTTTCAGGGTGGTACGAAAAGAAGCAAg                                         <  2:3204635/93‑1 (MQ=255)

                                                 aCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAgg                                        >  2:4384401/1‑93 (MQ=255)

                                                 aCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAgg                                        >  1:5336371/1‑93 (MQ=255)

                                                   ggATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTa                                      <  1:5172040/93‑1 (MQ=255)

                                                   ggATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTa                                      >  2:3443646/1‑93 (MQ=255)

                                                     aTGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAtt                                    <  1:4517415/93‑1 (MQ=255)

                                                     aTGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAtt                                    <  1:2606784/93‑1 (MQ=255)

                                                     aTGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAtt                                    <  1:3327516/93‑1 (MQ=255)

                                                      tGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAttt                                   <  1:6146234/93‑1 (MQ=255)

                                                      tGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAttt                                   >  2:864709/1‑93 (MQ=255)

                                                       gAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTc                                  >  2:371632/1‑93 (MQ=255)

                                                         aaaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaa                                >  1:1665672/1‑93 (MQ=255)

                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               >  1:2126341/1‑93 (MQ=255)

                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               <  2:6260472/93‑1 (MQ=255)

                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               >  1:3189623/1‑93 (MQ=255)

                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               >  1:5577963/1‑93 (MQ=255)

                                                           aaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAg                              >  2:2857297/1‑93 (MQ=255)

                                                            aGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAgg                             >  2:5478207/1‑93 (MQ=255)

                                                            aGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAgg                             <  2:6556069/93‑1 (MQ=255)

                                                             gCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAggg                            <  1:3909764/93‑1 (MQ=255)

                                                             gCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAggg                            >  1:138738/1‑93 (MQ=255)

                                                             gCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAggg                            >  1:5671739/1‑93 (MQ=255)

                                                               aaTCAACAGCCAGAGCACTAACGCCAACGATCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGc                          >  2:6643411/1‑93 (MQ=255)

                                                                  cAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGaa                       <  2:753019/93‑1 (MQ=255)

                                                                  cAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGaa                       >  2:6196372/1‑93 (MQ=255)

                                                                  cAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGaa                       <  2:2290716/93‑1 (MQ=255)

                                                                   aaCAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAg                      >  1:1780410/1‑93 (MQ=255)

                                                                    aCAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGc                     <  1:3598095/93‑1 (MQ=255)

                                                                    aCAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGc                     >  1:627009/1‑93 (MQ=255)

                                                                    aCAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGc                     >  1:24691/1‑93 (MQ=255)

                                                                    aCAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGc                     <  2:1890321/93‑1 (MQ=255)

                                                                      aGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGCAGCAAGGCATTTCAAAGGGGCGAAGCTc                   >  2:1265496/1‑93 (MQ=255)

                                                                      aGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTc                   >  2:2948502/1‑93 (MQ=255)

                                                                       gCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTcc                  >  2:154736/1‑93 (MQ=255)

                                                                       gCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTcc                  >  1:2642023/1‑93 (MQ=255)

                                                                         cAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGc                >  2:5274995/1‑93 (MQ=255)

                                                                         cAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGc                <  2:5826225/93‑1 (MQ=255)

                                                                           gagCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCt              >  2:4267778/1‑93 (MQ=255)

                                                                             gCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCa            >  1:1003161/1‑93 (MQ=255)

                                                                             gCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCa            >  1:4335082/1‑93 (MQ=255)

                                                                                 tAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTg        >  1:5995421/1‑93 (MQ=255)

                                                                                   aCGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGAc      <  2:3614865/93‑1 (MQ=255)

                                                                                     gCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCg    >  2:403363/1‑93 (MQ=255)

                                                                                       cAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGAt  <  1:4856018/93‑1 (MQ=255)

CTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAATGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGAT  >  NC_000913/2317747‑2317926

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`