Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,349,989 T→C M136V (ATG→GTG)  glpT ← sn‑glycerol‑3‑phosphate permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,349,9890TC99.5% 625.6 / ‑4.7 196M136V (ATG→GTG) glpTsn‑glycerol‑3‑phosphate permease
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (87/108);  total (87/109)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.34e-01

Only 100 of 216 total aligned reads displayed.

TGTGCGCACAGTTCCACACTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCA  >  NC_000913/2349899‑2350078
                                                                                          |                                                                                         
tgtgCGCACAGTTCCACACTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCCCCCCAccc                                                                                         >  2:5579389/1‑93 (MQ=255)
 gtgCGCACAGTTCCACACTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCaccccacccc                                                                                        >  2:1555264/1‑93 (MQ=255)
  tgCGCACAGTTCCACACTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACcccc                                                                                       <  2:6554682/93‑1 (MQ=255)
  tgCGCACAGTTCCACACTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACcccc                                                                                       <  2:441627/93‑1 (MQ=255)
  tgCGCACAGTTCCACACTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACcccc                                                                                       <  2:2342078/93‑1 (MQ=255)
  tgCGCACAGTTCCACACTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACcccc                                                                                       <  2:1931025/93‑1 (MQ=255)
    cgcACAGTTCCACACTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTg                                                                                     <  1:2120132/93‑1 (MQ=255)
     gcACAGTTCCACACTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTgg                                                                                    <  1:1795051/93‑1 (MQ=255)
       acaGTTCCACACTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCGCACGGCGGCCACCCCACCCCCTGGaa                                                                                  <  2:845273/93‑1 (MQ=255)
          gTTCCACACTGACACAATGCCGCCACGTTCTTTCTGCGAACACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGaacca                                                                               >  2:5871988/1‑93 (MQ=255)
           ttCCACACTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGaaccaa                                                                              <  1:4749138/93‑1 (MQ=255)
              cacaCTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCg                                                                           <  2:1915158/93‑1 (MQ=255)
              cacaCTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCg                                                                           >  2:716299/1‑93 (MQ=255)
              cacaCTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCg                                                                           >  1:4247563/1‑93 (MQ=255)
              cacaCTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCg                                                                           >  1:1331408/1‑93 (MQ=255)
               acacTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGACCACCCCACCCCCTGGAACCAACCGc                                                                          >  2:6624127/1‑93 (MQ=255)
                 acTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCag                                                                        >  1:2201187/1‑93 (MQ=255)
                  cTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGTCACCCCACCCCCTGGACCCAACCGCaga                                                                       >  1:2878769/1‑93 (MQ=255)
                  cTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCaga                                                                       <  2:3763497/93‑1 (MQ=255)
                  cTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCaga                                                                       >  1:2044489/1‑93 (MQ=255)
                   tGACACAATGCCGCCACGTTCTTTCTGTGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCagag                                                                      <  1:3709652/93‑1 (MQ=255)
                   tGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCagag                                                                      <  1:5518021/93‑1 (MQ=255)
                     acacAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCCGAGGa                                                                    >  1:2914461/1‑93 (MQ=255)
                     acacAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGa                                                                    >  1:6206636/1‑93 (MQ=255)
                     acacAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGa                                                                    <  2:3153815/93‑1 (MQ=255)
                      cacaATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGaa                                                                   <  1:4334004/93‑1 (MQ=255)
                      cacaATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGaa                                                                   >  1:3330195/1‑93 (MQ=255)
                        caATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGaaca                                                                 >  2:2483423/1‑93 (MQ=255)
                        caATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGaaca                                                                 >  1:4964030/1‑93 (MQ=255)
                          aTGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGaacaac                                                               >  2:5319914/1‑93 (MQ=255)
                          aTGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGaacaac                                                               <  2:1454737/93‑1 (MQ=255)
                          aTGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGaacaac                                                               >  1:826876/1‑93 (MQ=255)
                           tGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAacaaca                                                              >  2:1142591/1‑93 (MQ=255)
                           tGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAacaaca                                                              <  1:5140701/93‑1 (MQ=255)
                             ccgccACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGt                                                            <  2:6359605/93‑1 (MQ=255)
                              cgccACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTa                                                           <  1:6224942/93‑1 (MQ=255)
                              cgccACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTa                                                           <  2:683301/93‑1 (MQ=255)
                               gccACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTAc                                                          >  2:5802010/1‑93 (MQ=255)
                                 cACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTAcca                                                        >  1:4849395/1‑91 (MQ=255)
                                  aCGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGTACAACAGTACaaa                                                       >  1:4002584/1‑93 (MQ=255)
                                  aCGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACaaa                                                       >  2:4563297/1‑93 (MQ=255)
                                   cGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAAc                                                      >  2:4004954/1‑93 (MQ=255)
                                   cGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAAc                                                      <  2:2960672/93‑1 (MQ=255)
                                    gTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACa                                                     >  2:13657/1‑93 (MQ=255)
                                    gTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACa                                                     <  2:4518554/93‑1 (MQ=255)
                                    gTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACa                                                     >  2:4833035/1‑93 (MQ=255)
                                    gTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACa                                                     <  1:1211918/93‑1 (MQ=255)
                                     ttctttctGCGACCACCAGTGCACCATATTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACAt                                                    <  2:4074850/93‑1 (MQ=255)
                                     ttctttctGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACAt                                                    >  1:2324156/1‑93 (MQ=255)
                                        tttctGCGACGACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGAAACAACAGTACAAACATCAc                                                 <  1:1874730/93‑1 (MQ=255)
                                        tttctGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCAc                                                 >  2:596781/1‑93 (MQ=255)
                                        tttctGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCAc                                                 <  2:6468408/93‑1 (MQ=255)
                                         ttctGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCAcc                                                <  1:2440758/93‑1 (MQ=255)
                                         ttctGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCAcc                                                <  2:3036776/93‑1 (MQ=255)
                                             gCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCaa                                            <  2:4327913/93‑1 (MQ=255)
                                             gCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCaa                                            >  1:1720577/1‑93 (MQ=255)
                                              cGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCGGAGGAACAACAGTACAAACATCACCGCAAt                                           <  1:4097017/93‑1 (MQ=255)
                                                gccaccaGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGc                                         <  2:2043665/92‑1 (MQ=255)
                                                 ccaccaGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCt                                        <  2:2787098/93‑1 (MQ=255)
                                                 ccaccaGGGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGCACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCt                                        >  2:3391967/1‑93 (MQ=255)
                                                  caccaGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTc                                       >  2:4892982/1‑93 (MQ=255)
                                                  caccaGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTc                                       <  2:5658546/93‑1 (MQ=255)
                                                  caccaGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTc                                       <  1:2667858/93‑1 (MQ=255)
                                                  caccaGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTc                                       >  2:3283837/1‑93 (MQ=255)
                                                   accaGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCg                                      >  1:3264534/1‑93 (MQ=255)
                                                     caGTGCACCATAGTACGACCACACGGCGGCCCCCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGAc                                    <  1:6153018/93‑1 (MQ=255)
                                                     caGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGAc                                    >  2:4812769/1‑93 (MQ=255)
                                                     caGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGAc                                    <  2:2656437/93‑1 (MQ=255)
                                                     caGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGAc                                    <  2:3310967/93‑1 (MQ=255)
                                                      aGTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACg                                   <  1:4419302/93‑1 (MQ=255)
                                                       gTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGt                                  >  2:815464/1‑93 (MQ=255)
                                                       gTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGt                                  <  1:4891799/93‑1 (MQ=255)
                                                       gTGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGt                                  >  2:1655791/1‑93 (MQ=255)
                                                        tGCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTc                                 <  2:2108738/93‑1 (MQ=255)
                                                         gCACCATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCg                                >  1:1380929/1‑93 (MQ=255)
                                                            ccATAGAACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGccc                             <  1:3434993/93‑1 (MQ=255)
                                                             cATAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTGCAAACATCACCGCAATGCTCGACGTCGCCCa                            <  1:6272601/93‑1 (MQ=255)
                                                              aTAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCAt                           >  1:3533628/1‑93 (MQ=255)
                                                              aTAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCAt                           <  2:5643071/93‑1 (MQ=255)
                                                               tAGTACGACCACACGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATg                          <  1:2828736/93‑1 (MQ=255)
                                                                aGTACGACCACGCGGCGGCCACCCCGACCCCTGGAACCAGCCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATgg                         <  2:2579945/93‑1 (MQ=255)
                                                                   ccGACCCCACGGCGCCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGcac                      <  1:6464541/92‑1 (MQ=255)
                                                                        cacaCGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGc                 <  1:5358697/93‑1 (MQ=255)
                                                                          cacGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGccc               >  2:4151528/1‑93 (MQ=255)
                                                                          cacGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGccc               >  2:6304902/1‑93 (MQ=255)
                                                                          cacGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGccc               <  2:5429002/93‑1 (MQ=255)
                                                                          cacGGCGGCCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGAAATGCTCGACGTCGCACATGCCACAAAGcca               >  1:4999495/1‑92 (MQ=255)
                                                                               cggcCACCCCACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATaaa          <  1:3793469/93‑1 (MQ=255)
                                                                                  ccaccccaccCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAaacaa       <  1:1089671/93‑1 (MQ=255)
                                                                                  ccaccccaccCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAaacaa       <  2:6111767/93‑1 (MQ=255)
                                                                                    accccaccccCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAacaaca     >  1:3892865/1‑93 (MQ=255)
                                                                                    accccaccccCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAacaaca     <  1:6691773/93‑1 (MQ=255)
                                                                                    accccaccccCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAacaaca     >  2:1864725/1‑93 (MQ=255)
                                                                                    accccaccccCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAacaaca     >  2:1772786/1‑93 (MQ=255)
                                                                                    accccaccccCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAacaaca     <  1:2401144/93‑1 (MQ=255)
                                                                                    accccaccccCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAacaaca     >  1:800506/1‑93 (MQ=255)
                                                                                     ccccATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACAt    <  1:3051981/93‑1 (MQ=255)
                                                                                     ccccACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACAt    >  2:1238987/1‑93 (MQ=255)
                                                                                      cccACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATc   <  2:6014473/93‑1 (MQ=255)
                                                                                       ccACCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCa  >  2:2989661/1‑93 (MQ=255)
                                                                                          |                                                                                         
TGTGCGCACAGTTCCACACTGACACAATGCCGCCACGTTCTTTCTGCGACCACCAGTGCACCATAGTACGACCACACGGCGGCCACCCCATCCCCTGGAACCAACCGCAGAGGAACAACAGTACAAACATCACCGCAATGCTCGACGTCGCCCATGGCACAAAGCCCATAAACAACATCA  >  NC_000913/2349899‑2350078

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: