BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,360,682	T→C	A324A (GCA→GCG)	b2249 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,360,682	0	T	C	99.4%	519.8 / NA	167	A324A (GCA→GCG)	b2249	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (109/57); minor base G (1/0); total (110/57)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 235 total aligned reads displayed.

AGTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGTGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCACTTCACA  >  NC_000913/2360592‑2360771

aGTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAgcgc                                                                                         >  1:1153755/1‑93 (MQ=255)

 gTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGcc                                                                                        <  2:1783958/93‑1 (MQ=255)

 gTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGcc                                                                                        >  1:1913114/1‑93 (MQ=255)

   gCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAg                                                                                      <  1:5268532/93‑1 (MQ=255)

   gCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAg                                                                                      >  1:769259/1‑93 (MQ=255)

    cTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAgccagcgccagc                                                                                     <  2:3774689/93‑1 (MQ=255)

    cTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAgccagcgccagc                                                                                     <  2:6236235/93‑1 (MQ=255)

     tGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGcc                                                                                    <  2:1508638/93‑1 (MQ=255)

     tGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGGTCTCGACACTCGAAACAGCCAGCGCCAGcc                                                                                    >  1:6433789/1‑93 (MQ=255)

      gAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAAACCGAAACAGCCAGCGCCAGccg                                                                                   >  1:1434518/1‑92 (MQ=255)

             acacGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCaaaa                                                                            <  2:4011060/93‑1 (MQ=255)

              cacGCAGAGCGAGAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATACTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAAt                                                                           >  2:3593147/1‑93 (MQ=255)

              cacGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAAt                                                                           <  1:6661221/93‑1 (MQ=255)

              cacGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAAt                                                                           <  2:6109336/93‑1 (MQ=255)

                cGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATgg                                                                         <  1:5741250/93‑1 (MQ=255)

                 gCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGt                                                                        >  2:5614302/1‑93 (MQ=255)

                 gCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGt                                                                        <  2:3663648/93‑1 (MQ=255)

                  cAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGtt                                                                       <  2:3290789/93‑1 (MQ=255)

                   agagCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTg                                                                      >  1:4943812/1‑93 (MQ=255)

                   agagCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACACGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTg                                                                      >  1:2913965/1‑93 (MQ=255)

                    gagCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTgg                                                                     >  1:3629140/1‑93 (MQ=255)

                     agCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGc                                                                    <  2:6425116/93‑1 (MQ=255)

                     agCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGc                                                                    >  2:2086660/1‑93 (MQ=255)

                      gCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGcc                                                                   >  1:562127/1‑93 (MQ=255)

                      gCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGcc                                                                   >  1:3603598/1‑93 (MQ=255)

                       cGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGccg                                                                  >  1:4136554/1‑92 (MQ=255)

                          aaGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCccgcc                                                               <  2:3330296/93‑1 (MQ=255)

                          aaGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCccgcc                                                               <  2:1272378/93‑1 (MQ=255)

                           aGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCccgccg                                                              >  1:54085/1‑93 (MQ=255)

                            gTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCTTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGt                                                             <  2:1561336/93‑1 (MQ=255)

                            gTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGt                                                             <  2:4571897/93‑1 (MQ=255)

                            gTGCCGTCGGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAACCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGt                                                             <  1:507671/93‑1 (MQ=255)

                              gCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTc                                                           <  2:5037465/93‑1 (MQ=255)

                              gCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTc                                                           <  2:5153277/93‑1 (MQ=255)

                              gCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTc                                                           <  1:5430495/93‑1 (MQ=255)

                                cGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTg                                                         <  1:3918230/93‑1 (MQ=255)

                                 gTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCATTCTga                                                        >  2:4945797/1‑92 (MQ=255)

                                  tCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGGAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTa                                                       >  2:4819542/1‑93 (MQ=255)

                                  tCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAACCCCGAATCAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTa                                                       <  2:5717823/93‑1 (MQ=255)

                                   cTGGCGTGGCTAGCGCAAATTTGAGATCCTCGTTCTCGAACCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTaa                                                      <  1:1842826/93‑1 (MQ=255)

                                   cTGGCGGGGCTAGCGAAAAGTTGAGATGCTCTTTCTCGAAACCCGAAACAGCCAGCGCCGGCCGGGCAAAATGGTTGGCCCGCCGTTCTGTaa                                                      <  2:6174477/93‑1 (MQ=255)

                                     ggCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAACCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATc                                                    <  2:2737258/93‑1 (MQ=255)

                                     ggCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGGCCGCCGTTCTGTAATc                                                    >  1:4355535/1‑93 (MQ=255)

                                      gctgggCTAGCGCAAAGTGGGGATGCTCGTTCTCGAAACCCGAAAAAGCCAGCGCCACCCCGCCAAAATGGTTGGCCCGCCGTTCTGTAATcc                                                   <  2:492125/89‑1 (MQ=255)

                                      gCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATcc                                                   >  2:5331010/1‑93 (MQ=255)

                                      gCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATcc                                                   >  2:1366810/1‑93 (MQ=255)

                                        gTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAg                                                 >  2:680371/1‑93 (MQ=255)

                                         tgtcTAGCGAAAAGTTGAGAGCCTCTTTCTCGACACCCGAACCAGCCAGCGCCAGCCCGGCAAATTGGTTGCCCCGCCGTTCTGTAATCCAGt                                                <  2:4336693/90‑1 (MQ=255)

                                         tGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGt                                                >  2:867179/1‑93 (MQ=255)

                                           gCTAGCGCAAATTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTgc                                              <  1:3078490/93‑1 (MQ=255)

                                           gCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTgc                                              >  1:6177503/1‑93 (MQ=255)

                                            cTAGCGCAAAGTTGAGATGCTCGTTCTCGAACCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTgcg                                             <  1:3905537/93‑1 (MQ=255)

                                             tAGCGAAAAGTTGAGATGCTCGTTCTCGAACCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTgcgc                                            <  2:430157/93‑1 (MQ=255)

                                                cgaaaaGTTGAGATGCTCTTCCTCAAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGt                                         <  1:2389492/90‑1 (MQ=255)

                                                 gcAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGtt                                        >  2:4081136/1‑93 (MQ=255)

                                                  cAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGttt                                       >  1:5957736/1‑93 (MQ=255)

                                                    aaGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTgc                                     >  2:1136395/1‑93 (MQ=255)

                                                      gTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTgcgc                                   >  1:1236040/1‑93 (MQ=255)

                                                       ttGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGcc                                  <  2:5347268/93‑1 (MQ=255)

                                                       ttGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGcc                                  >  2:2260224/1‑93 (MQ=255)

                                                        tGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCa                                 >  1:2091388/1‑93 (MQ=255)

                                                        gaagaTGCCCCTCCTCAAAACCCGAACCAGCCAGCGCCCGCCGGTCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCa                                 <  2:2654888/91‑1 (MQ=255)

                                                         gagaTGCTCGTTCTGGAAACCCGAAACAGCCAGCGCCAGCCGGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAg                                <  2:1020655/93‑1 (MQ=255)

                                                         gagaTGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAg                                >  1:586306/1‑93 (MQ=255)

                                                         gagaTGCTCGTTCCCGAAACCCAAAACAGCCACGCCCAGCCCGGAAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAg                                <  1:639459/93‑1 (MQ=255)

                                                         gagaGGCTCTTTCTCGAACCGCGAACCAGCGAGCTCGCGCCGGGCAAATTGGTGGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAg                                <  2:3933334/93‑1 (MQ=255)

                                                          agaTGCTCGTTCTCGAACCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAgg                               <  1:1685510/93‑1 (MQ=255)

                                                           gaggCTCTTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAggg                              <  2:198350/90‑1 (MQ=255)

                                                           gaTGCTCGTTCTCGAAACCTGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAggg                              >  1:6545278/1‑93 (MQ=255)

                                                           gaTGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAggg                              >  2:3269074/1‑93 (MQ=255)

                                                            aTGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGt                             >  1:1564948/1‑93 (MQ=255)

                                                             tGCTCGTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGtt                            >  2:248939/1‑93 (MQ=255)

                                                             tGCTCGTCCTCAAACCCCAAACCAGCCAGCGCCAGCCCGGCAAAATGGTGGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGtt                            <  1:4879930/93‑1 (MQ=255)

                                                              gCTCGTTCTCGAAACCCGAAACGGCCAGCGCCAGCCCGGAAAAATGGTGGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGttt                           <  1:2908885/93‑1 (MQ=255)

                                                                ccGTTCTCAAAACCGAAAACAGCCAGCGCCACCCGGGAAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTtcc                         <  1:475769/92‑1 (MQ=255)

                                                                 cGTTCTCAAACCCGGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTtcct                        <  1:6401215/93‑1 (MQ=255)

                                                                  gTTCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTtcctc                       >  2:2359769/1‑93 (MQ=255)

                                                                   ttCTCGAACCCCAAAACAGCCAGCGCGAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTtcctcc                      <  2:4593355/93‑1 (MQ=255)

                                                                   ttCTCGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTtcctcc                      >  1:3249870/1‑93 (MQ=255)

                                                                      tcGAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCtgt                   >  2:4381825/1‑93 (MQ=255)

                                                                      ccGAACCCCGAAACAGCCAGCGCCAGCCCGGAAAAATGGTTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCtgt                   <  1:1970086/92‑1 (MQ=255)

                                                                        gAAACCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGa                 >  2:5003845/1‑93 (MQ=255)

                                                                        aaaaCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGa                 >  2:6321093/2‑93 (MQ=255)

                                                                         aaccccGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGaa                <  2:3249048/90‑1 (MQ=255)

                                                                         aaaCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGaa                >  2:539372/1‑93 (MQ=255)

                                                                          accccGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAg               <  1:2246444/91‑1 (MQ=255)

                                                                          aaCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAg               >  2:2069658/1‑93 (MQ=255)

                                                                          aaCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAg               >  2:1678763/1‑93 (MQ=255)

                                                                          aaCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAg               >  1:4218258/1‑93 (MQ=255)

                                                                           aCCCGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCAGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTACTGTGATgg              >  1:5323546/1‑93 (MQ=255)

                                                                            ccgaaaaCAGCCAGCCCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGa             <  2:3368560/89‑1 (MQ=255)

                                                                            cccGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGa             >  1:4089174/1‑93 (MQ=255)

                                                                              cGAAACAGCCAGCGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAAc           >  2:5286582/1‑93 (MQ=255)

                                                                                aaaaAGCCAGCGCCAGCCCGGCAAAATGGTTGCCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCa         <  1:6090536/93‑1 (MQ=255)

                                                                                 accagccagcGCCACCCCGGAAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCAc        <  2:3857140/91‑1 (MQ=255)

                                                                                 aaCAGCCAGCGCCAGCCCGGAAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCAc        <  2:6141296/93‑1 (MQ=255)

                                                                                  aCAGCCAGCGCCAGCCCGGCAAAATGGGTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCACt       >  1:2968166/1‑93 (MQ=255)

                                                                                   cagccagcGCCAGCGCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCACtt      <  1:3138915/93‑1 (MQ=255)

                                                                                   cagccagcGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCACtt      >  1:1164229/1‑93 (MQ=255)

                                                                                     gccagcgccagcCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCACTTca    >  2:1725373/1‑93 (MQ=255)

AGTGCTGAAACGCACACGCAGAGCGAAAGTGCCGTCTGGCGTGGCTAGCGCAAAGTTGAGATGCTCGTTCTCGAAACCCGAAACAGCCAGTGCCAGCCCGGCAAAATGGTTGGCCCGCCGTTCTGTAATCCAGTGCGCAGTTTGCGCCAGGGTTTCCTCCTGTGAAGGAACCACTTCACA  >  NC_000913/2360592‑2360771

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`