BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,393,734	A→G	G61G (GGT→GGC)	nuoJ ←	NADH dehydrogenase I chain J

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,393,734	0	A	G	100.0%	817.3 / NA	255	G61G (GGT→GGC)	nuoJ	NADH dehydrogenase I chain J
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (118/137); total (118/137)

Only 100 of 260 total aligned reads displayed.

CTGCGGTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCACCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGAAATAATCAG  >  NC_000913/2393644‑2393823

cTGCGGTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGcc                                                                                         <  2:2221390/93‑1 (MQ=255)

cTGCGGTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGcc                                                                                         >  1:4964714/1‑93 (MQ=255)

cTGCGGTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGcc                                                                                         <  1:265842/93‑1 (MQ=255)

    ggTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCcgcg                                                                                     >  2:753711/1‑93 (MQ=255)

     gTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGt                                                                                    >  1:5036339/1‑93 (MQ=255)

     gTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGt                                                                                    >  1:1355815/1‑93 (MQ=255)

     gTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGt                                                                                    <  1:2988838/93‑1 (MQ=255)

      tttCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTa                                                                                   >  2:478699/1‑93 (MQ=255)

      tttCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTa                                                                                   >  2:5186472/1‑93 (MQ=255)

      tttCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTa                                                                                   >  1:4524144/1‑93 (MQ=255)

      tttCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTa                                                                                   <  2:2430852/93‑1 (MQ=255)

           gCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGa                                                                              <  1:4860228/93‑1 (MQ=255)

            ccACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGAt                                                                             <  2:2569207/93‑1 (MQ=255)

            ccACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGAt                                                                             <  1:2069148/93‑1 (MQ=255)

              aCTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATaa                                                                           <  1:238699/93‑1 (MQ=255)

              aCTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATaa                                                                           >  1:1986574/1‑93 (MQ=255)

              aCTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATaa                                                                           <  2:1419147/93‑1 (MQ=255)

                tGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAAtt                                                                         <  2:2688617/93‑1 (MQ=255)

                tGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATAGCGCCCGCGTAGACGATAAtt                                                                         <  2:6666717/93‑1 (MQ=255)

                 ggCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAAttt                                                                        >  1:817705/1‑93 (MQ=255)

                 ggCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAAttt                                                                        >  1:1594933/1‑93 (MQ=255)

                 ggCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAAttt                                                                        <  1:3726020/93‑1 (MQ=255)

                  gCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTc                                                                       >  2:2322163/1‑93 (MQ=255)

                  gCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTc                                                                       >  2:5442838/1‑93 (MQ=255)

                  gCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTc                                                                       <  2:2665012/93‑1 (MQ=255)

                    gTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCa                                                                     >  2:5722859/1‑93 (MQ=255)

                     ttCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAg                                                                    <  2:5857305/93‑1 (MQ=255)

                      tCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAgc                                                                   <  2:1146411/93‑1 (MQ=255)

                      tCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAgc                                                                   <  2:2032751/93‑1 (MQ=255)

                        cTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAgcgc                                                                 <  1:3557111/93‑1 (MQ=255)

                         tGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCa                                                                <  1:2342619/93‑1 (MQ=255)

                          gTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCAc                                                               >  1:6153238/1‑93 (MQ=255)

                           ttCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCAcc                                                              >  1:3809682/1‑93 (MQ=255)

                           ttCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCAcc                                                              >  2:4085123/1‑93 (MQ=255)

                             cGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCgg                                                            <  1:3798013/93‑1 (MQ=255)

                                tttCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGa                                                         <  1:2608131/93‑1 (MQ=255)

                                  tCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAg                                                       >  2:4235665/1‑93 (MQ=255)

                                  tCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAg                                                       <  1:3981326/93‑1 (MQ=255)

                                   cTGAACCGCCTAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGt                                                      <  1:4173238/93‑1 (MQ=255)

                                   cTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGt                                                      <  1:4602890/93‑1 (MQ=255)

                                     taaCCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTaa                                                    <  2:3002180/92‑1 (MQ=255)

                                     gAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTaa                                                    <  1:4424759/93‑1 (MQ=255)

                                       aCCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCGCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAgc                                                  >  2:319843/1‑93 (MQ=255)

                                       aCCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGCAGACGATAATTTCCAGCGCACCGGCGAAGTAAgc                                                  >  2:1968658/1‑93 (MQ=255)

                                        ccGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAgcg                                                 <  2:1849479/93‑1 (MQ=255)

                                          gCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGcc                                               <  2:4494654/93‑1 (MQ=255)

                                            ccAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCa                                             >  2:4763411/1‑93 (MQ=255)

                                            ccAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCa                                             <  1:1449725/93‑1 (MQ=255)

                                             cAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAg                                            >  2:4289391/1‑93 (MQ=255)

                                              cggTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGt                                           <  1:740663/92‑1 (MQ=255)

                                              aGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGt                                           >  1:1030220/1‑93 (MQ=255)

                                              aGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGt                                           <  2:2145382/93‑1 (MQ=255)

                                              aGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGt                                           <  1:2817546/93‑1 (MQ=255)

                                                gTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTga                                         >  1:3293275/1‑93 (MQ=255)

                                                 ttGAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTgag                                        <  2:558717/93‑1 (MQ=255)

                                                   gAGCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGagaa                                      >  1:602789/1‑93 (MQ=255)

                                                     gCATCATCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGagaaga                                    >  2:6288801/1‑93 (MQ=255)

                                                      catcatCACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTCCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAgaagaa                                   <  1:3340596/93‑1 (MQ=255)

                                                       atcatcACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAac                                  <  2:2876894/93‑1 (MQ=255)

                                                       atcatcACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAac                                  <  1:637840/93‑1 (MQ=255)

                                                       atcatcACCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAac                                  <  1:2764162/93‑1 (MQ=255)

                                                        tcatcaCCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAaca                                 >  2:3503805/1‑93 (MQ=255)

                                                        tcatcaCCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAaca                                 <  1:1738501/93‑1 (MQ=255)

                                                        tcatcaCCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAaca                                 >  1:1686311/1‑93 (MQ=255)

                                                         catcaCCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAacac                                <  1:4676208/93‑1 (MQ=255)

                                                          atcaCCACGAACACGAACAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACAcc                               >  2:2456710/1‑93 (MQ=255)

                                                               cacgaacacgaaCAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGa                          <  2:6404771/93‑1 (MQ=255)

                                                               cacgaacacgaaCAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGa                          <  1:116063/93‑1 (MQ=255)

                                                                acgaacacgaacAGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGaa                         >  2:932860/1‑93 (MQ=255)

                                                                 cgaacacgaacaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGaaa                        >  1:1848467/1‑93 (MQ=255)

                                                                  gaacacgaacaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAAt                       >  2:4302286/1‑93 (MQ=255)

                                                                   aacacgaacaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATc                      >  1:1917967/1‑93 (MQ=255)

                                                                   aacacgaacaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATc                      >  2:150907/1‑93 (MQ=255)

                                                                   aacacgaacaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATc                      <  2:1221280/93‑1 (MQ=255)

                                                                    acacgaacaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCg                     >  1:3200945/1‑93 (MQ=255)

                                                                       cgaacaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCca                  <  2:6068106/93‑1 (MQ=255)

                                                                        gaacaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCcag                 >  2:4926911/1‑93 (MQ=255)

                                                                         aacaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGGCAGAAGAACACCCCGGAAATCGCcaga                >  1:5325334/1‑92 (MQ=255)

                                                                          acaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCcagca               <  1:6276135/93‑1 (MQ=255)

                                                                          acaGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCcagca               <  1:5761590/93‑1 (MQ=255)

                                                                            aGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCagcagc             <  1:124497/93‑1 (MQ=255)

                                                                            aGCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCagcagc             >  1:5632389/1‑93 (MQ=255)

                                                                             gCACCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCg            >  2:3246358/1‑93 (MQ=255)

                                                                               aCCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGac          >  1:2518482/1‑92 (MQ=255)

                                                                               aCCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGaa          >  2:456699/1‑93 (MQ=255)

                                                                               aCCATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGaa          >  2:6376181/1‑93 (MQ=255)

                                                                                ccATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGcaa         >  1:2922210/1‑93 (MQ=255)

                                                                                ccATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGaaa         <  2:369063/93‑1 (MQ=255)

                                                                                ccATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGaaa         <  2:3935141/93‑1 (MQ=255)

                                                                                 cATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGAaat        >  2:1037495/1‑93 (MQ=255)

                                                                                 cATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGAaat        <  2:6130586/93‑1 (MQ=255)

                                                                                 cATAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGAaat        >  1:5473038/1‑93 (MQ=255)

                                                                                  aTAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGAaata       >  2:3395153/1‑93 (MQ=255)

                                                                                  aTAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGAaata       <  2:1636261/93‑1 (MQ=255)

                                                                                   tAATGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGAaataa      >  1:3683501/1‑93 (MQ=255)

                                                                                     aTGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGAAATAATc    >  2:53957/1‑93 (MQ=255)

                                                                                     aTGGCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGAAATAATc    >  1:6631209/1‑93 (MQ=255)

                                                                                      aggCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCCGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGAAATAATCa   <  2:4703476/92‑1 (MQ=255)

                                                                                       ggCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGAAATAATCAg  <  2:5115635/93‑1 (MQ=255)

                                                                                       ggCGCCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGAAATAATCAg  <  2:1790651/93‑1 (MQ=255)

CTGCGGTTTCAGCCACTGGCGTTCCTGTTCGATTTCTGAACCGCCCAGGTTGAGCATCATCACCACGAACACGAACAGCACCATAATGGCACCCGCGTAGACGATAATTTCCAGCGCACCGGCGAAGTAAGCGCCCAGTGAGAAGAACACCCCGGAAATCGCCAGCAGCGAAATAATCAG  >  NC_000913/2393644‑2393823

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`