BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,448,289	C→T	A108T (GCA→ACA)	b2333 ←	putative fimbrial‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,448,289	0	C	T	100.0%	849.8 / NA	232	A108T (GCA→ACA)	b2333	putative fimbrial‑like protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (113/119); total (113/119)

Only 100 of 239 total aligned reads displayed.

CCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGCCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAA  >  NC_000913/2448199‑2448378

ccccATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCa                                                                                         >  2:5918883/1‑93 (MQ=255)

 cccATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAg                                                                                        >  1:6302287/1‑93 (MQ=255)

 cccATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAg                                                                                        >  2:185746/1‑93 (MQ=255)

   cATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGaa                                                                                      >  2:1571941/1‑93 (MQ=255)

   cATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGaa                                                                                      <  1:3067094/93‑1 (MQ=255)

   cATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGaa                                                                                      <  1:1929229/93‑1 (MQ=255)

    aTTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCGCACTCCCTGAGCGGGTGATGACGTATCCAGTGTCAGaaa                                                                                     >  1:2200050/1‑93 (MQ=255)

    aTTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGaaa                                                                                     <  1:3865947/93‑1 (MQ=255)

    aTTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGaaa                                                                                     >  1:910360/1‑93 (MQ=255)

     tttGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGaaaa                                                                                    >  1:4262292/1‑93 (MQ=255)

     tttGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGaaaa                                                                                    <  1:5138573/93‑1 (MQ=255)

      ttGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAAc                                                                                   <  1:4892531/93‑1 (MQ=255)

       tGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAAcc                                                                                  >  2:6345695/1‑93 (MQ=255)

        gTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCg                                                                                 >  1:449418/1‑93 (MQ=255)

         tATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCgg                                                                                >  2:1978193/1‑93 (MQ=255)

         tATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCgg                                                                                >  1:5824371/1‑93 (MQ=255)

           ttgttgATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGgt                                                                              >  2:6078076/1‑93 (MQ=255)

           ttgttgATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGgt                                                                              >  2:393963/1‑93 (MQ=255)

           ttgttgATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGgt                                                                              >  1:4050089/1‑93 (MQ=255)

           ttgttgATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGgt                                                                              <  1:1694812/93‑1 (MQ=255)

             gttgATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGgttt                                                                            >  2:1800534/1‑92 (MQ=255)

             gttgATGGCAACCTGCATTCCGTCGGTTTTTGCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGgttg                                                                            <  2:1361496/93‑1 (MQ=255)

                gATGGCAGCCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCTCTCCCTGAGCGGTTGATGACGTACCCAGTGTCAGAAAACCGGGTTGTTc                                                                         <  1:3129375/93‑1 (MQ=255)

                  tGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGc                                                                       <  1:1473330/93‑1 (MQ=255)

                   ggCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCt                                                                      <  1:3265357/93‑1 (MQ=255)

                     cAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGt                                                                    <  2:5017827/93‑1 (MQ=255)

                     cAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGt                                                                    <  1:6680513/93‑1 (MQ=255)

                      aaCCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGtc                                                                   <  2:4882253/93‑1 (MQ=255)

                       aCCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGtct                                                                  <  2:876220/93‑1 (MQ=255)

                       aCCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGtct                                                                  <  2:4222408/93‑1 (MQ=255)

                       aCCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGtct                                                                  >  1:4010423/1‑93 (MQ=255)

                        ccTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGTTGACGTATCCAGGGTCAGAAAACCGGGTTGTTCGCTGtctt                                                                 >  2:5105384/1‑93 (MQ=255)

                         ctccATTCCGTCGGTTCTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGATGGTCGCTGtcttc                                                                >  1:4732951/4‑93 (MQ=255)

                         cTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGtcttc                                                                <  2:5457857/93‑1 (MQ=255)

                         cTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGtcttc                                                                <  2:4637955/93‑1 (MQ=255)

                         cTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGtcttc                                                                >  2:6161175/1‑93 (MQ=255)

                         cTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGtcttc                                                                <  1:3560310/93‑1 (MQ=255)

                          tGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGtcttct                                                               <  2:3531826/93‑1 (MQ=255)

                           gCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTa                                                              >  2:34483/1‑93 (MQ=255)

                           gCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTa                                                              <  1:4943006/93‑1 (MQ=255)

                             aTTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTAcc                                                            >  1:5836023/1‑93 (MQ=255)

                             aTTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTAcc                                                            >  1:1332133/1‑93 (MQ=255)

                             aTTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTAcc                                                            >  1:2223202/1‑93 (MQ=255)

                                ccGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTAccccc                                                         <  2:402035/93‑1 (MQ=255)

                                  gTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGt                                                       >  2:1545060/1‑93 (MQ=255)

                                  gTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGt                                                       >  2:5352049/1‑93 (MQ=255)

                                   tCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTg                                                      <  1:2351452/93‑1 (MQ=255)

                                   tCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTg                                                      >  1:4354273/1‑93 (MQ=255)

                                   tCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTg                                                      >  2:5988186/1‑93 (MQ=255)

                                      gTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGc                                                   <  1:2733393/93‑1 (MQ=255)

                                       ttttttCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCg                                                  <  1:5188425/93‑1 (MQ=255)

                                        tttttCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGt                                                 >  2:6448040/1‑93 (MQ=255)

                                        tttttCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGt                                                 <  2:1287151/93‑1 (MQ=255)

                                          tttCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGa                                               >  1:5456469/1‑93 (MQ=255)

                                          tttCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGa                                               >  2:2080403/1‑93 (MQ=255)

                                            tCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGTGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACt                                             <  1:5756471/93‑1 (MQ=255)

                                            tCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACt                                             <  2:3008503/93‑1 (MQ=255)

                                            tCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACt                                             <  1:1523089/93‑1 (MQ=255)

                                               aTGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACtttt                                          >  2:3725215/1‑93 (MQ=255)

                                                 gCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTAc                                        >  2:3665275/1‑93 (MQ=255)

                                                 gCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTAc                                        >  1:6245128/1‑93 (MQ=255)

                                                  ccAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAATCCGGGTTGTTCGCTGTCTTCTCCCCCCGTGAGCGTGACTTTTACg                                       <  1:2623286/93‑1 (MQ=255)

                                                  ccAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACg                                       <  2:663663/93‑1 (MQ=255)

                                                   cAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGt                                      <  1:6011218/93‑1 (MQ=255)

                                                   cAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGt                                      <  2:2386271/93‑1 (MQ=255)

                                                   cAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGt                                      <  1:3724822/93‑1 (MQ=255)

                                                    aaTTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGtt                                     <  1:2665433/93‑1 (MQ=255)

                                                     aTTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTg                                    <  2:1495093/93‑1 (MQ=255)

                                                      ttCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGt                                   >  1:1766015/1‑93 (MQ=255)

                                                      ttCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGt                                   <  2:2784480/93‑1 (MQ=255)

                                                        cccACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTAt                                 <  1:6618818/93‑1 (MQ=255)

                                                        cccACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTAt                                 <  1:4676189/93‑1 (MQ=255)

                                                         ccACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATc                                >  1:3036644/1‑93 (MQ=255)

                                                          cACTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATcc                               <  2:5546185/93‑1 (MQ=255)

                                                            cTCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCccg                             >  2:5801836/1‑93 (MQ=255)

                                                             tCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCccgc                            >  2:3750246/1‑93 (MQ=255)

                                                             tCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCccgc                            >  1:844857/1‑93 (MQ=255)

                                                             tCCCTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCccgc                            <  2:4540888/93‑1 (MQ=255)

                                                               ccTGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCccgccg                          <  2:5675404/93‑1 (MQ=255)

                                                                 tGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGc                        >  1:2738917/1‑93 (MQ=255)

                                                                 tGAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGc                        <  2:2577757/93‑1 (MQ=255)

                                                                  gAGCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGcc                       >  2:4288514/1‑93 (MQ=255)

                                                                    gCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCt                     >  2:2677912/1‑93 (MQ=255)

                                                                    gCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCt                     >  1:810038/1‑93 (MQ=255)

                                                                    gCGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCt                     <  1:6179759/93‑1 (MQ=255)

                                                                     cGGTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCtt                    >  2:913402/1‑93 (MQ=255)

                                                                      ggTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCttt                   <  2:4888265/93‑1 (MQ=255)

                                                                      ggTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCttt                   <  2:2418227/93‑1 (MQ=255)

                                                                       gTTGATGACGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTg                  >  1:4146564/1‑93 (MQ=255)

                                                                          gatgaCGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCaa               <  1:1218088/93‑1 (MQ=255)

                                                                            tgaCGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATc             >  1:3712177/1‑93 (MQ=255)

                                                                             gaCGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTGCGTTGTATCCCGCCGGCCCTTTGCAATCt            <  1:5593507/93‑1 (MQ=255)

                                                                             gaCGTATCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTATGTTGTATCCCGCCGGCCCTTTGCAATCt            >  1:5078345/1‑93 (MQ=255)

                                                                                   tCCAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGc      >  2:2231172/1‑93 (MQ=255)

                                                                                     cAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCtt    >  1:6040556/1‑93 (MQ=255)

                                                                                     cAGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTCTCAGCtt    >  1:2813745/1‑93 (MQ=255)

                                                                                      aGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTa   >  2:3190169/1‑93 (MQ=255)

                                                                                      aGTGTCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTa   >  2:2729655/1‑93 (MQ=255)

                                                                                       gtgtCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCttta  >  1:1189622/1‑91 (MQ=255)

                                                                                       gtgtCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTaa  >  2:5386502/1‑93 (MQ=255)

CCCCATTTGTATTGTTGATGGCAACCTGCATTCCGTCGGTTTTTTCCATGCCAATTCCCACTCCCTGAGCGGTTGATGACGTATCCAGTGCCAGAAAACCGGGTTGTTCGCTGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAA  >  NC_000913/2448199‑2448378

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`