BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,461,706	T→C	S225S (AGT→AGC)	b2345 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,461,706	0	T	C	100.0%	960.2 / NA	288	S225S (AGT→AGC)	b2345	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (140/148); total (140/148)

Only 100 of 290 total aligned reads displayed.

TTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGTGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTT  >  NC_000913/2461616‑2461793

ttACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGa                                                                                       >  1:3068465/1‑93 (MQ=255)

ttACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGa                                                                                       >  2:1539719/1‑93 (MQ=255)

ttACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGa                                                                                       >  1:5592559/1‑93 (MQ=255)

ttACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGa                                                                                       >  1:2349991/1‑93 (MQ=255)

 tACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGaa                                                                                      >  2:29975/1‑93 (MQ=255)

   cTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGaaaa                                                                                    <  1:4327828/93‑1 (MQ=255)

   cTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGaaaa                                                                                    <  1:5731101/93‑1 (MQ=255)

     tATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACg                                                                                  >  1:928990/1‑93 (MQ=255)

     tATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACg                                                                                  >  2:3370703/1‑93 (MQ=255)

      aTCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGc                                                                                 >  2:1278686/1‑93 (MQ=255)

       tctctcGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGcc                                                                                <  1:6367821/93‑1 (MQ=255)

        ctctcGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCa                                                                               <  2:3871109/93‑1 (MQ=255)

         tctcGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAg                                                                              <  1:5108784/93‑1 (MQ=255)

         tctcGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAg                                                                              >  2:5842064/1‑93 (MQ=255)

         tctcGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAg                                                                              <  1:4165673/93‑1 (MQ=255)

         tctcGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAg                                                                              >  2:4350494/1‑93 (MQ=255)

         tctcGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAg                                                                              <  1:4070333/93‑1 (MQ=255)

           tcGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAACACGCCAGGa                                                                            >  2:1625849/1‑93 (MQ=255)

           tcGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGa                                                                            >  2:5545207/1‑93 (MQ=255)

            cGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAg                                                                           >  1:918719/1‑93 (MQ=255)

             ggTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGt                                                                          <  1:5826211/93‑1 (MQ=255)

             ggTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGt                                                                          >  1:1432778/1‑93 (MQ=255)

              gTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATGGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTg                                                                         >  2:1169256/1‑93 (MQ=255)

              gTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTg                                                                         >  2:3210237/1‑93 (MQ=255)

              gTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTg                                                                         <  1:817729/93‑1 (MQ=255)

               ttACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGc                                                                        >  1:3751835/1‑93 (MQ=255)

                tactacGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCt                                                                       <  2:5156598/93‑1 (MQ=255)

                  ctacGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTc                                                                     <  2:1641703/93‑1 (MQ=255)

                   tacGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCa                                                                    >  1:1017743/1‑93 (MQ=255)

                   tacGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCa                                                                    >  1:2466875/1‑93 (MQ=255)

                    acGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAg                                                                   >  1:6733253/1‑93 (MQ=255)

                    acGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAg                                                                   <  1:3615881/93‑1 (MQ=255)

                       aTCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGt                                                                >  2:6042405/1‑93 (MQ=255)

                        tCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTg                                                               >  1:5297423/1‑93 (MQ=255)

                          aGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGt                                                             >  2:6020033/1‑93 (MQ=255)

                           ggACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGtt                                                            <  2:3526044/93‑1 (MQ=255)

                           ggACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGtt                                                            <  2:2302337/93‑1 (MQ=255)

                           ggACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGtt                                                            >  1:5885520/1‑93 (MQ=255)

                            gacgacTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGttt                                                           >  2:2046953/1‑93 (MQ=255)

                            gacgacTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGttt                                                           <  2:2825327/93‑1 (MQ=255)

                                acTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGaaa                                                       >  1:4763896/1‑93 (MQ=255)

                                acTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGaaa                                                       <  1:2123028/93‑1 (MQ=255)

                                 cTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAg                                                      >  2:1351951/1‑93 (MQ=255)

                                 cTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAg                                                      >  1:6443630/1‑93 (MQ=255)

                                  tACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGc                                                     <  2:6404687/93‑1 (MQ=255)

                                   tccACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCa                                                    <  1:5457931/92‑1 (MQ=255)

                                   aCCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCa                                                    <  2:253755/93‑1 (MQ=255)

                                    ccACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAg                                                   <  2:5638706/93‑1 (MQ=255)

                                     cacaTTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGt                                                  >  2:4783670/1‑93 (MQ=255)

                                      acaTTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTa                                                 >  1:3954069/1‑93 (MQ=255)

                                       caTTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTaa                                                >  1:4539367/1‑93 (MQ=255)

                                        aTTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTaaa                                               <  2:846090/93‑1 (MQ=255)

                                         ttNAAANAGGAATTCGTATTAANNGTGATAGTCTCACCCAATATTNTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAg                                              <  2:4735135/93‑1 (MQ=255)

                                         ttCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAg                                              >  1:6220836/1‑93 (MQ=255)

                                          tCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGc                                             <  1:1235599/93‑1 (MQ=255)

                                           cAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCt                                            <  1:2890451/93‑1 (MQ=255)

                                            aaaGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTa                                           >  1:2580369/1‑93 (MQ=255)

                                               gatgAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCa                                        <  2:2347649/90‑1 (MQ=255)

                                               gagGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCa                                        >  2:1717045/1‑93 (MQ=255)

                                               gagGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCa                                        <  1:3868094/93‑1 (MQ=255)

                                               gagGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCa                                        >  2:225766/1‑93 (MQ=255)

                                                   aaTTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGc                                    >  2:5808772/1‑93 (MQ=255)

                                                    aTTCGTATTAATGGTGATAGTCTCCCCCAATATTGTAGCGAAAGCGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCa                                   <  2:5408708/93‑1 (MQ=255)

                                                     ttCGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAg                                  >  1:1154954/1‑93 (MQ=255)

                                                       cGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGaa                                <  1:1027502/93‑1 (MQ=255)

                                                       cGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGaa                                <  2:619106/93‑1 (MQ=255)

                                                       cGTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGaa                                <  1:6045413/93‑1 (MQ=255)

                                                        gTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAAt                               >  1:1326498/1‑93 (MQ=255)

                                                        gTATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAAt                               <  1:2726021/93‑1 (MQ=255)

                                                         tATTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATc                              >  2:4003086/1‑93 (MQ=255)

                                                          aTTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCa                             <  1:5000503/93‑1 (MQ=255)

                                                          aTTAATGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCa                             <  2:1853954/93‑1 (MQ=255)

                                                             aaTGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCAttt                          <  1:4015947/93‑1 (MQ=255)

                                                             aaTGGTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCAttt                          <  1:1499425/93‑1 (MQ=255)

                                                                 gTGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCaa                      <  1:860621/93‑1 (MQ=255)

                                                                  tGATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAAc                     <  2:2642606/93‑1 (MQ=255)

                                                                   gATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACt                    <  1:6153761/93‑1 (MQ=255)

                                                                   gATAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACt                    <  2:3920109/93‑1 (MQ=255)

                                                                    aTAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTg                   <  2:3643883/93‑1 (MQ=255)

                                                                     tAGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTgg                  <  2:6680143/93‑1 (MQ=255)

                                                                      aGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGt                 <  2:3607464/93‑1 (MQ=255)

                                                                      aGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGt                 <  2:3287078/93‑1 (MQ=255)

                                                                      aGTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGt                 >  2:3483544/1‑93 (MQ=255)

                                                                       gTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGtt                <  2:3016264/93‑1 (MQ=255)

                                                                       gTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGtt                <  1:4179212/93‑1 (MQ=255)

                                                                       gTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGtt                <  2:4245194/93‑1 (MQ=255)

                                                                       gTCTCACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGtt                >  1:2809663/1‑93 (MQ=255)

                                                                        tctcACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGTTc               <  1:6084957/93‑1 (MQ=255)

                                                                         ctcACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGTTcc              <  1:1285899/93‑1 (MQ=255)

                                                                           cACCCAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGTTCCGa            >  2:373339/1‑93 (MQ=255)

                                                                              ccAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGTTCCGatca         >  1:2005036/1‑93 (MQ=255)

                                                                              ccAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGTTCCGatca         >  1:3676347/1‑93 (MQ=255)

                                                                               cAATATTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGTTCCGatcat        <  1:177219/93‑1 (MQ=255)

                                                                                 atatTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGTTCCGAtcatca      <  1:3413359/93‑1 (MQ=255)

                                                                                  tatTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAg     >  1:480034/1‑93 (MQ=255)

                                                                                  tatTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAg     <  2:1259653/93‑1 (MQ=255)

                                                                                   atTGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAgg    >  1:3542575/1‑93 (MQ=255)

                                                                                    ttGTAGCGAAAACGCCAGGTGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGt   >  1:6564395/1‑93 (MQ=255)

                                                                                    ttGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGt   <  1:4617891/93‑1 (MQ=255)

                                                                                     tGTAGCGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGtt  <  2:4556292/93‑1 (MQ=255)

TTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGTGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTT  >  NC_000913/2461616‑2461793

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`