BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,465,657	T→C	Y365H (TAT→CAT)	intC →	putative prophage Sf6‑like integrase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,465,657	0	T	C	100.0%	973.2 / NA	293	Y365H (TAT→CAT)	intC	putative prophage Sf6‑like integrase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (145/148); total (145/148)

Only 100 of 300 total aligned reads displayed.

AACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGTATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATAG  >  NC_000913/2465567‑2465746

 aCGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCAtc                                                                                        <  1:5741625/93‑1 (MQ=255)

 aCGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCAtc                                                                                        >  1:5768095/1‑93 (MQ=255)

 aCGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCAtc                                                                                        <  1:363744/93‑1 (MQ=255)

  cGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCAtct                                                                                       >  1:3344325/1‑93 (MQ=255)

  cGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCAtct                                                                                       <  2:3406985/93‑1 (MQ=255)

   gAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCAtctc                                                                                      >  1:2292772/1‑93 (MQ=255)

   gAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCAtctc                                                                                      >  2:4716803/1‑93 (MQ=255)

   gAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCAtctc                                                                                      >  2:4593974/1‑93 (MQ=255)

    aGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCg                                                                                     >  2:5205081/1‑93 (MQ=255)

      cACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGAt                                                                                   <  2:890904/93‑1 (MQ=255)

       aCGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATa                                                                                  >  1:6044110/1‑93 (MQ=255)

          aaTGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAAc                                                                               <  1:5120666/93‑1 (MQ=255)

          aaTGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAAc                                                                               >  2:1280106/1‑93 (MQ=255)

          aaTGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAAc                                                                               >  2:1928992/1‑93 (MQ=255)

           aTGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCCAGCTCAGCATCTCGATAAACg                                                                              >  2:4438695/1‑93 (MQ=255)

           aTGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACg                                                                              >  1:1784488/1‑93 (MQ=255)

            tGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGc                                                                             >  1:3369040/1‑93 (MQ=255)

              gCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCag                                                                           >  2:3887121/1‑93 (MQ=255)

               ccTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCaga                                                                          <  1:1436950/93‑1 (MQ=255)

               ccTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCaga                                                                          <  1:487921/93‑1 (MQ=255)

               ccTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCaga                                                                          <  2:6517876/93‑1 (MQ=255)

               ccTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCaga                                                                          <  1:1151047/93‑1 (MQ=255)

                ctgctgACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCagag                                                                         >  2:3001664/1‑93 (MQ=255)

                 tgctgACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAgaga                                                                        >  1:2057992/1‑93 (MQ=255)

                      aCGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAatga                                                                   <  2:3192519/93‑1 (MQ=255)

                      aCGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAatga                                                                   <  2:4936887/93‑1 (MQ=255)

                       cGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAatgat                                                                  >  1:4296908/1‑93 (MQ=255)

                        gCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAatgatg                                                                 >  2:2250577/1‑93 (MQ=255)

                        gCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAatgatg                                                                 >  1:6599638/1‑93 (MQ=255)

                         cTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGc                                                                >  2:1737551/1‑93 (MQ=255)

                          tATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCa                                                               >  1:6395794/1‑93 (MQ=255)

                           aTTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCaa                                                              >  1:3844336/1‑93 (MQ=255)

                            ttGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAAt                                                             >  2:2383577/1‑93 (MQ=255)

                            ttGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAAt                                                             >  1:4974628/1‑93 (MQ=255)

                            ttGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAAt                                                             >  1:2695520/1‑93 (MQ=255)

                            ttGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGAAGAGAAATGATGCAAt                                                             <  2:5065874/93‑1 (MQ=255)

                                aGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAAtggtg                                                         <  1:95665/93‑1 (MQ=255)

                                        tGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACt                                                 <  1:5592926/93‑1 (MQ=255)

                                         ggCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTg                                                >  2:622947/1‑93 (MQ=255)

                                           cacaTGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGc                                              <  2:580883/93‑1 (MQ=255)

                                           cacaTGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGc                                              <  2:184933/93‑1 (MQ=255)

                                            acaTGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCt                                             <  1:1247069/93‑1 (MQ=255)

                                             caTGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTTGCtt                                            >  1:550840/1‑93 (MQ=255)

                                             caTGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCtt                                            >  2:6396759/1‑93 (MQ=255)

                                               tGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTtgt                                          >  2:1457729/1‑92 (MQ=255)

                                               tGCAAACGGCGGATCTCTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTtga                                          <  2:5744474/93‑1 (MQ=255)

                                                gCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTtgat                                         <  2:4886041/93‑1 (MQ=255)

                                                gCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTtgat                                         <  2:4497288/93‑1 (MQ=255)

                                                gCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTtgat                                         <  2:4054805/93‑1 (MQ=255)

                                                  aaaCGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTtgatga                                       <  1:2590879/93‑1 (MQ=255)

                                                   aaCGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGGTgag                                      >  1:3781646/1‑93 (MQ=255)

                                                   aaCGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATgag                                      <  1:1697888/93‑1 (MQ=255)

                                                   aaCGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATgag                                      <  1:2961035/93‑1 (MQ=255)

                                                   aaCGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATgag                                      >  2:5853677/1‑93 (MQ=255)

                                                    aCGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATgaga                                     <  2:2123829/93‑1 (MQ=255)

                                                     cggcggATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGaa                                    <  2:5347077/93‑1 (MQ=255)

                                                       gcggATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAgg                                  <  1:3687356/93‑1 (MQ=255)

                                                         ggATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTg                                <  2:5286494/93‑1 (MQ=255)

                                                          gATCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTTATGAGAAGgggg                               >  2:5361629/1‑93 (MQ=255)

                                                           gtCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGa                              <  2:5469631/92‑1 (MQ=255)

                                                           aTCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGggggg                              >  1:2424439/1‑92 (MQ=255)

                                                           aTCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGa                              <  2:2826299/93‑1 (MQ=255)

                                                            tCTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGACTTGATGAGAAGGTGGAg                             <  1:1324176/93‑1 (MQ=255)

                                                             cTGTGCGTGGGATTTACAACCATGCTCAGCATCTCGATAACCGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGt                            <  2:725886/93‑1 (MQ=255)

                                                              tgtgCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTTATGAGAAGGGGGAggg                           >  2:261429/1‑91 (MQ=255)

                                                              tgtgCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTg                           <  1:19379/93‑1 (MQ=255)

                                                              tgtgCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTg                           <  2:1118574/93‑1 (MQ=255)

                                                                tgCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGGAGGTGGGGTGAg                         >  1:3986151/1‑93 (MQ=255)

                                                                tgCGTGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAg                         >  2:5461230/1‑93 (MQ=255)

                                                                   gTGGGATTTACAACCATGCCCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAAGTGGAGTGAGCgc                      >  1:6514183/1‑92 (MQ=255)

                                                                    tGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGGGAAAGGGGGGGGAGAGAc                     >  2:4545837/1‑93 (MQ=255)

                                                                    tGGGATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGAc                     <  2:4160106/93‑1 (MQ=255)

                                                                      ggATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTTATGAGAAGGGGGAGTGAGCGACCt                   >  1:5936079/1‑93 (MQ=255)

                                                                      ggATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCt                   <  2:3608903/93‑1 (MQ=255)

                                                                      ggATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCt                   <  2:1998309/93‑1 (MQ=255)

                                                                      ggATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCt                   <  1:3566901/93‑1 (MQ=255)

                                                                      ggATTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGGGAGCGACCt                   >  1:3501972/1‑93 (MQ=255)

                                                                        aTTTACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGGGAGGGACCTTa                 >  1:4476439/1‑93 (MQ=255)

                                                                         tttACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTaa                <  1:2873825/93‑1 (MQ=255)

                                                                         tttACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTaa                >  1:1508040/1‑93 (MQ=255)

                                                                          ttACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTaac               <  2:2175708/93‑1 (MQ=255)

                                                                           tACAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTaaca              <  1:3175903/93‑1 (MQ=255)

                                                                            aCAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGGTTAGGAGGTGGGGTGAGCGACCTTaacaa             >  1:4595784/1‑93 (MQ=255)

                                                                            aCAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTaacaa             <  2:6138332/93‑1 (MQ=255)

                                                                             cAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTaacaac            <  2:4688986/93‑1 (MQ=255)

                                                                             cAACCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTaacaac            <  1:1721298/93‑1 (MQ=255)

                                                                              aaCCATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGCGGGCGGACTGGCTTGGTGAGAAGGGGGAGGGAGGGCGCTTAACAACt           >  2:4831973/1‑93 (MQ=255)

                                                                                ccATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTAt         <  1:713266/93‑1 (MQ=255)

                                                                                ccATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGGGGAGTGAGCGACCTTAACAACTAt         >  1:827572/1‑93 (MQ=255)

                                                                                ccATGCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAAGGGGAGTGAGCGACCTTAACAACTAt         >  1:544335/1‑93 (MQ=255)

                                                                                ccATGCTCAGCATCTCGATAAACGCAGAGAAACGATGCAATGGTGGGCGGACTGGCTTTATGAGAAGGGGGAGTGAGCGACCTTAAAAACTAt         >  1:4687601/1‑93 (MQ=255)

                                                                                    gCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGaa     <  2:5663414/93‑1 (MQ=255)

                                                                                    gCTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGaa     >  1:2189843/1‑93 (MQ=255)

                                                                                     cTCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTTGCTTTATGAGAAGGGGGGGTGAGAGACCCTTACAACTATctaca    >  1:4085847/1‑89 (MQ=255)

                                                                                      tCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATa   <  2:3342355/93‑1 (MQ=255)

                                                                                      tCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATa   <  1:3092801/93‑1 (MQ=255)

                                                                                      tCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATa   <  2:2536772/93‑1 (MQ=255)

                                                                                      tCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATa   >  1:569860/1‑93 (MQ=255)

                                                                                      tCAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATa   <  2:1677746/93‑1 (MQ=255)

                                                                                       cAGCATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATAg  <  1:6151089/93‑1 (MQ=255)

AACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGTATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGAGCGACCTTAACAACTATCGAATAG  >  NC_000913/2465567‑2465746

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`