BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,519,941	G→A	S186F (TCC→TTC)	xapR ←	XapR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,519,941	0	G	A	100.0%	886.3 / NA	237	S186F (TCC→TTC)	xapR	XapR
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (122/115); total (122/115)

Only 100 of 241 total aligned reads displayed.

GGCAAACTCGCTGCAAAAAATCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGGAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTAAAACCAGTCGGTGGTTCT  >  NC_000913/2519852‑2520030

ggCAAACTCGCTGCAAAAAATCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGaaaa                                                                                        >  1:553432/1‑93 (MQ=255)

 gCAAACTCGCTGCAAAAAATCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAaaaa                                                                                       >  2:5352025/1‑93 (MQ=255)

 gCAAACTCGCTGCAAAAAATCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAaaaa                                                                                       <  1:4439024/93‑1 (MQ=255)

 gCAAACTCGCTGCAAAAAATCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAaaaa                                                                                       <  2:821045/93‑1 (MQ=255)

  cAAACTCGCTGCAAAAAATCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAat                                                                                      <  2:3491536/93‑1 (MQ=255)

     aCTCGCTGCAAAAAATCCCAGTCAGTGTAAGCGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAatgat                                                                                   <  1:2365933/93‑1 (MQ=255)

     aCTCGCTGCAAAAAATCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAatgat                                                                                   >  1:6720952/1‑93 (MQ=255)

     aCTCGCTGCAAAAAATCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAatgat                                                                                   <  1:762158/93‑1 (MQ=255)

       tCGCTGCAAAAAATCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAAtgatga                                                                                 >  1:3448184/1‑93 (MQ=255)

       tCGCTGCAAAAAATCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAAtgatga                                                                                 <  1:4777741/93‑1 (MQ=255)

       tCGCTGCAAAAAATCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAAtgatga                                                                                 >  1:2574296/1‑93 (MQ=255)

        cGCTGCAAAAAATCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATgag                                                                                <  2:5610012/93‑1 (MQ=255)

          cTGCAAAAAATCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATgagag                                                                              <  2:1574104/93‑1 (MQ=255)

           tGCAAAAAATCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATgagaga                                                                             <  1:4912386/93‑1 (MQ=255)

           tGCAAAAAATCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATgagaga                                                                             >  1:1853305/1‑93 (MQ=255)

            gCAAAAAATCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAgat                                                                            <  1:1061494/93‑1 (MQ=255)

            gCAAAAAATCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAgat                                                                            <  1:6329270/93‑1 (MQ=255)

             cAAAAAATCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAgatg                                                                           <  1:2178545/93‑1 (MQ=255)

              aaaaaaTCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAgatga                                                                          <  2:1238093/93‑1 (MQ=255)

              aaaaaaTCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAgatga                                                                          >  1:3184780/1‑93 (MQ=255)

              aaaaaaTCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAgatga                                                                          <  2:4820644/93‑1 (MQ=255)

              aaaaaaTCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAgatga                                                                          <  2:4528803/93‑1 (MQ=255)

               aaaaaTCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAgatgat                                                                         <  2:6644031/93‑1 (MQ=255)

               aaaaaTCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAgatgat                                                                         <  2:2467508/93‑1 (MQ=255)

               aaaaaTCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAgatgat                                                                         <  1:1236434/93‑1 (MQ=255)

                 aaaTCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGc                                                                       <  1:4791081/93‑1 (MQ=255)

                   aTCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGctc                                                                     <  1:2496090/93‑1 (MQ=255)

                   aTCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGctc                                                                     >  2:467287/1‑93 (MQ=255)

                    tCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGctct                                                                    >  2:4024293/1‑93 (MQ=255)

                    tCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGctct                                                                    <  1:6251448/93‑1 (MQ=255)

                    tCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGctct                                                                    <  1:1444199/93‑1 (MQ=255)

                    tCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGctct                                                                    >  1:1339709/1‑93 (MQ=255)

                       cagtcagcTTCAACGGGCGGCATTGTAACAACATACTCGTCACGTAGCGCTTCCAGCGGGAAGGTGAAAAATGATGAGAGATGATGCTCTTCa                                                                 <  1:39288/93‑1 (MQ=255)

                        agtcagtGTAAACGCGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAg                                                                <  1:2776224/93‑1 (MQ=255)

                         gtcagtGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAgg                                                               >  1:6575558/1‑93 (MQ=255)

                         gtcagtGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAgg                                                               >  2:706154/1‑93 (MQ=255)

                          tcagtGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGc                                                              >  2:6016166/1‑93 (MQ=255)

                          tcagtGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGc                                                              >  2:1956861/1‑93 (MQ=255)

                           cagtGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCa                                                             <  1:4690988/93‑1 (MQ=255)

                            agtGTAAGCGGGCGGCATTATAGCAAAATTCTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGCCAt                                                            <  1:4946642/93‑1 (MQ=255)

                            agtGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCAt                                                            >  2:1194834/1‑93 (MQ=255)

                             gtgtAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATc                                                           >  1:3770557/1‑93 (MQ=255)

                             gtgtAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATc                                                           >  2:2870370/1‑93 (MQ=255)

                                tAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGcc                                                        >  1:1120301/1‑93 (MQ=255)

                                 aaaCGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGcca                                                       >  2:3952311/1‑93 (MQ=255)

                                  aaCGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATAGccac                                                      >  2:3926971/1‑93 (MQ=255)

                                   aCGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGccacc                                                     <  1:5232800/93‑1 (MQ=255)

                                   aCGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGccacc                                                     >  2:1507998/1‑93 (MQ=255)

                                   aCGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGccacc                                                     >  2:2957169/1‑93 (MQ=255)

                                    cGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGccacca                                                    <  2:2731653/93‑1 (MQ=255)

                                        cggcATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGaaa                                                <  2:1804396/93‑1 (MQ=255)

                                        cggcATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGaaa                                                <  1:2024698/93‑1 (MQ=255)

                                          gcATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACg                                              >  1:2057182/1‑93 (MQ=255)

                                            aTTGTAACAAAATACTCGTCACGTAGCGCGTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGcc                                            <  1:5837896/93‑1 (MQ=255)

                                              tGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGa                                          <  1:3802692/93‑1 (MQ=255)

                                               gTAACATAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGAt                                         <  1:4304784/93‑1 (MQ=255)

                                                 aaCAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTc                                       >  1:5326430/1‑93 (MQ=255)

                                                  aCAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCa                                      >  1:2880341/1‑93 (MQ=255)

                                                  aCAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCa                                      >  1:4566431/1‑93 (MQ=255)

                                                    aaaaTACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATg                                    >  2:4213770/1‑93 (MQ=255)

                                                     aaaTACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGc                                   >  2:6104339/1‑93 (MQ=255)

                                                     aaaTACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGc                                   >  1:2324620/1‑93 (MQ=255)

                                                       aTACTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCaa                                 <  1:2796008/93‑1 (MQ=255)

                                                          cTCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCg                              >  1:6051467/1‑93 (MQ=255)

                                                           tCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGt                             >  2:3619190/1‑93 (MQ=255)

                                                           tCGTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGt                             >  1:4035041/1‑93 (MQ=255)

                                                             gTCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTaa                           >  1:5042994/1‑93 (MQ=255)

                                                              tCACGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAg                          >  1:6177016/1‑93 (MQ=255)

                                                                aCGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAGCCGTAAGCt                        >  1:5350157/1‑93 (MQ=255)

                                                                aCGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCt                        >  2:1311615/1‑93 (MQ=255)

                                                                 cGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTTAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTg                       >  1:2683250/1‑93 (MQ=255)

                                                                 cGTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTg                       >  1:838037/1‑93 (MQ=255)

                                                                 cGNAGCNNTTCCAGCGGGACGNNGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTg                       <  2:5922587/93‑1 (MQ=255)

                                                                  gTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTgg                      >  2:1031675/1‑93 (MQ=255)

                                                                  gTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTgg                      >  2:6441845/1‑93 (MQ=255)

                                                                  gTAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTgg                      >  1:6517641/1‑93 (MQ=255)

                                                                   tAGCGTTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGt                     <  2:3202104/93‑1 (MQ=255)

                                                                   tAGCGCTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGt                     >  1:4413589/1‑93 (MQ=255)

                                                                     gcgcTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTaa                   >  1:1623065/1‑93 (MQ=255)

                                                                     gcgcTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTaa                   >  2:6243688/1‑93 (MQ=255)

                                                                       gcTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTaaaa                 >  1:3195601/1‑93 (MQ=255)

                                                                        cTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTAAAAc                <  2:906426/93‑1 (MQ=255)

                                                                        cTTCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTAAAAc                >  2:1706955/1‑93 (MQ=255)

                                                                         ttCCAGCGGTACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTAAAAcc               <  1:1924233/93‑1 (MQ=255)

                                                                         ttCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTAAAAcc               >  2:5047511/1‑93 (MQ=255)

                                                                         ttCCAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTAAAAcc               >  1:6659995/1‑93 (MQ=255)

                                                                           ccAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTAAAACCAg             <  1:3013303/93‑1 (MQ=255)

                                                                            cAGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTAAAACCAGt            <  1:3426146/93‑1 (MQ=255)

                                                                             aGCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTAAAACCAGTc           <  1:909483/93‑1 (MQ=255)

                                                                             aGCGGGACGGTGAAAAACGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGGAAAACCAGTc           <  1:4070751/93‑1 (MQ=255)

                                                                              gCGGGACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTAAAACCAGTCg          >  2:353916/1‑93 (MQ=255)

                                                                                gggACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTAAAACCAGTCggt        >  2:4597145/1‑93 (MQ=255)

                                                                                gggACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTAAAACCAGTCggt        >  1:2773263/1‑93 (MQ=255)

                                                                                gggACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTAAAACCAGTCggt        <  1:3271984/93‑1 (MQ=255)

                                                                                gggACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTAAAACCAGTCggg        >  1:5699058/1‑92 (MQ=255)

                                                                                 ggACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTAAAACCAGTCggtg       >  2:5187413/1‑93 (MQ=255)

                                                                                 ggACGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTAAAACCAGTCggtg       <  2:2212215/93‑1 (MQ=255)

                                                                                   gcGGTGAAAAATGATGAGAGATGATTCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTAAAACCAGTCggtggt     <  2:2113471/92‑1 (MQ=255)

                                                                                   aCGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTAAAACCAGTCggtggt     <  1:2963510/93‑1 (MQ=255)

                                                                                   aCGGTGAAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTAAAACCAGTCggtggt     <  1:6114889/93‑1 (MQ=255)

GGCAAACTCGCTGCAAAAAATCCCAGTCAGTGTAAACGGGCGGCATTGTAACAAAATACTCGTCACGTAGCGCTTCCAGCGGGACGGTGGAAAATGATGAGAGATGATGCTCTTCAGGCATCGCCACCAGAAACGCCGATTCATGCAACCGTAAGCTGGTAAAACCAGTCGGTGGTTCT  >  NC_000913/2519852‑2520030

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`