BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,561,503	A→G	intergenic (+366/‑94)	b2447 → / → b2448	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,561,503	0	A	G	100.0%	804.5 / NA	246	intergenic (+366/‑94)	b2447/b2448	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (138/108); total (138/108)

Only 100 of 252 total aligned reads displayed.

CACCAAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAAC  >  NC_000913/2561413‑2561595

caccaAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGt                                                                                            >  2:320447/1‑93 (MQ=255)

caccaAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGt                                                                                            >  1:2300624/1‑93 (MQ=255)

   caAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTcc                                                                                         <  2:6591694/93‑1 (MQ=255)

    aaaGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTccc                                                                                        <  2:2019262/93‑1 (MQ=255)

     aaGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCca                                                                                       >  2:2942213/1‑93 (MQ=255)

     aaGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCca                                                                                       >  2:801821/1‑93 (MQ=255)

      aGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaa                                                                                      >  1:5508422/1‑93 (MQ=255)

       gCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaac                                                                                     <  2:1288558/93‑1 (MQ=255)

        ccAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaaca                                                                                    <  1:4453534/93‑1 (MQ=255)

         caacaaGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCcaacaa                                                                                   <  1:895064/93‑1 (MQ=255)

             aaGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACaaa                                                                               >  2:6302676/1‑93 (MQ=255)

              aGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACaaaa                                                                              >  1:4591577/1‑93 (MQ=255)

              aGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACaaaa                                                                              >  2:2577963/1‑93 (MQ=255)

              aGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACaaaa                                                                              <  1:3972086/93‑1 (MQ=255)

                 tGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATaa                                                                           >  1:1903847/1‑93 (MQ=255)

                 tGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATaa                                                                           >  2:5264990/1‑93 (MQ=255)

                  gggAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATaaa                                                                          <  1:5730900/93‑1 (MQ=255)

                   ggAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAg                                                                         <  2:2366995/93‑1 (MQ=255)

                      ggTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATg                                                                      <  2:4242902/93‑1 (MQ=255)

                      ggTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATg                                                                      <  1:206794/93‑1 (MQ=255)

                       gTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATgg                                                                     >  2:2838997/1‑93 (MQ=255)

                       gTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATgg                                                                     <  1:4984321/93‑1 (MQ=255)

                        tGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATggg                                                                    >  1:2957851/1‑93 (MQ=255)

                        tGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATggg                                                                    >  2:1439122/1‑93 (MQ=255)

                        tGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATggg                                                                    <  1:4836936/93‑1 (MQ=255)

                        tGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATggg                                                                    >  2:4671523/1‑93 (MQ=255)

                        tGAATTGTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATggg                                                                    <  2:5575030/93‑1 (MQ=255)

                         gAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGa                                                                   >  1:5235767/1‑93 (MQ=255)

                         gAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGa                                                                   <  1:1661197/93‑1 (MQ=255)

                         gAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGa                                                                   >  1:2132233/1‑93 (MQ=255)

                           aTTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAgg                                                                 <  2:6674272/93‑1 (MQ=255)

                               tgtgATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTaaa                                                             >  1:2319052/1‑93 (MQ=255)

                                 tgATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTaaaaa                                                           <  2:505435/93‑1 (MQ=255)

                                 tgATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTaaaaa                                                           <  2:210164/93‑1 (MQ=255)

                                  gATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAAt                                                          <  2:3865358/93‑1 (MQ=255)

                                    tGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGa                                                        >  1:5962463/1‑93 (MQ=255)

                                     gCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGaa                                                       <  2:5329181/93‑1 (MQ=255)

                                       aGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAAc                                                     <  2:2186320/93‑1 (MQ=255)

                                       aGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAAc                                                     >  2:1648263/1‑93 (MQ=255)

                                        gATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACg                                                    >  1:4268663/1‑93 (MQ=255)

                                         aTCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACgg                                                   >  1:6637501/1‑93 (MQ=255)

                                          gcGCTTGTCCCCTGCAGGCAGTTTTGTTTAATTCAATCAACGAAGGGCGGTTCCCAACAAAAAAATAAAGATGGGAGGTAAAAATGAAACGGt                                                  <  1:2493276/92‑1 (MQ=255)

                                            gCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTgg                                                >  2:213034/1‑93 (MQ=255)

                                            gCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTgg                                                >  1:6478915/1‑93 (MQ=255)

                                             cTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTggg                                               >  1:144538/1‑93 (MQ=255)

                                              tttttCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGa                                              >  2:1739800/1‑93 (MQ=255)

                                              tttttCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGa                                              >  2:6392467/1‑93 (MQ=255)

                                              tttttCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGa                                              >  1:1037946/1‑93 (MQ=255)

                                               ttttCCCTTCAGGCATTTTTGTTTAATTCAATCAACGCAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGaa                                             >  2:2047289/1‑93 (MQ=255)

                                               ttttCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGaa                                             <  1:6025588/93‑1 (MQ=255)

                                                tttCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAg                                            >  1:1611094/1‑93 (MQ=255)

                                                 ttCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGt                                           <  2:6732860/93‑1 (MQ=255)

                                                 ttCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGt                                           <  1:6100141/93‑1 (MQ=255)

                                                  tCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTg                                          >  1:5384681/1‑93 (MQ=255)

                                                   cccTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTgg                                         >  1:2034872/1‑93 (MQ=255)

                                                    ccTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGc                                        >  1:1275298/1‑93 (MQ=255)

                                                    ccTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGc                                        >  1:2774897/1‑93 (MQ=255)

                                                        cAGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTa                                    >  2:3722592/1‑93 (MQ=255)

                                                         aGGCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTAc                                   <  2:4458765/93‑1 (MQ=255)

                                                          ggCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACt                                  <  2:2416079/93‑1 (MQ=255)

                                                           gCATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTg                                 <  2:3516416/93‑1 (MQ=255)

                                                            cATTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTgg                                <  1:4135873/93‑1 (MQ=255)

                                                             aTTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGTAGTGGCTTTACTGGt                               >  2:4291901/1‑93 (MQ=255)

                                                             aTTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTggg                               >  2:1474146/1‑92 (MQ=255)

                                                             aTTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGt                               >  2:3385920/1‑93 (MQ=255)

                                                             aTTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGt                               >  2:886672/1‑93 (MQ=255)

                                                             aTTTTTGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGt                               <  2:1547861/93‑1 (MQ=255)

                                                              tttttGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTg                              >  2:4791368/1‑93 (MQ=255)

                                                              tttttGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTg                              <  1:6198073/93‑1 (MQ=255)

                                                              tttttGGTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTg                              >  1:2992954/1‑93 (MQ=255)

                                                               ttttGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGa                             <  1:3412982/93‑1 (MQ=255)

                                                                tttGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGAt                            >  2:1934630/1‑93 (MQ=255)

                                                                  tGTTTAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATgg                          <  2:1175925/93‑1 (MQ=255)

                                                                     ttAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTaa                       >  1:2253036/1‑93 (MQ=255)

                                                                      tAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAAt                      <  1:1309704/93‑1 (MQ=255)

                                                                      tAATTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAAt                      <  2:136449/93‑1 (MQ=255)

                                                                        aTTCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGt                    <  2:4137734/93‑1 (MQ=255)

                                                                         ttCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGtt                   >  1:798754/1‑93 (MQ=255)

                                                                         ttCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGtt                   <  2:5898979/93‑1 (MQ=255)

                                                                         ttCAATCAACGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGtt                   >  2:268503/1‑93 (MQ=255)

                                                                          tcaatcaaGGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAAGGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTg                  <  1:3427545/93‑1 (MQ=255)

                                                                           caatcaaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTgg                 <  2:574389/93‑1 (MQ=255)

                                                                            aatcaaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGt                >  1:3282768/1‑93 (MQ=255)

                                                                            aatcaaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGt                <  2:5115289/93‑1 (MQ=255)

                                                                             atcaaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGtt               <  1:3714793/93‑1 (MQ=255)

                                                                              tcaaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGttt              >  1:44999/1‑93 (MQ=255)

                                                                                aaCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGc            >  2:2503974/1‑93 (MQ=255)

                                                                                 aCGAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCt           >  2:626826/1‑93 (MQ=255)

                                                                                 aCGAAAGGAGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGAGGGCAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCt           >  1:6570136/1‑93 (MQ=255)

                                                                                   gAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGt         >  2:4900788/1‑93 (MQ=255)

                                                                                   gAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGt         >  1:5179934/1‑93 (MQ=255)

                                                                                   gAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGt         >  1:6353919/1‑93 (MQ=255)

                                                                                   gAAAGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGt         >  1:6717292/1‑93 (MQ=255)

                                                                                    aaaGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTa        >  2:6165683/1‑93 (MQ=255)

                                                                                     aaGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTAt       >  1:3495955/1‑93 (MQ=255)

                                                                                      aGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTAtt      >  1:329934/1‑93 (MQ=255)

                                                                                      aGGCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTAtt      <  1:1128192/93‑1 (MQ=255)

                                                                                       ggCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTg     >  2:5828851/1‑93 (MQ=255)

                                                                                       ggCGGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTg     >  1:471688/1‑93 (MQ=255)

                                                                                          aGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAAc  <  2:1592226/93‑1 (MQ=255)

CACCAAAGCCAACAAGATGGGAGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAAATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAAC  >  NC_000913/2561413‑2561595

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`