BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,747,166	G→A	A117T (GCT→ACT)	b4540 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,747,166	0	G	A	100.0%	894.9 / NA	246	A117T (GCT→ACT)	b4540	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (113/133); total (113/133)

Only 100 of 249 total aligned reads displayed.

GCAATTGCGACTGGTGTGCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCGCTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCACCCGTATGCTGATG  >  NC_000913/2747076‑2747255

gCAATTGCGACTGGTGTGCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACt                                                                                         <  2:5632167/93‑1 (MQ=255)

gCAATTGCGACTGGTGTGCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACt                                                                                         <  1:6445525/93‑1 (MQ=255)

 cAATTGCGACTGGTGTGCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACtt                                                                                        >  1:446012/1‑93 (MQ=255)

  aaTTGCGACTGGTGTGCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTa                                                                                       <  2:1577076/93‑1 (MQ=255)

  aaTTGCGACTGGTGTGCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTa                                                                                       <  1:6220940/93‑1 (MQ=255)

   aTTGCGACTGGTGTGCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTAt                                                                                      >  1:1402126/1‑93 (MQ=255)

    ttGCGACTGGTGTGCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATc                                                                                     <  2:1149430/93‑1 (MQ=255)

    ttGCGACTGGTGTGCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATc                                                                                     <  2:4319082/93‑1 (MQ=255)

     tGCGACTGGTGTGCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATcc                                                                                    <  1:3095122/93‑1 (MQ=255)

     tGCGACTGGTGTGCTGACTTGTGTCGTACTGGTATGTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATcc                                                                                    <  2:2135959/93‑1 (MQ=255)

      tcGACTGGTGTGCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCg                                                                                   <  1:1603674/92‑1 (MQ=255)

          cTGGTGTGCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGagtg                                                                               >  2:1429961/1‑92 (MQ=255)

          cTGGTGTGCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGagta                                                                               <  1:788069/93‑1 (MQ=255)

          cTGGTGTGCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGagta                                                                               >  1:3508193/1‑93 (MQ=255)

           tGGTGTGCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGagtag                                                                              <  1:3328515/93‑1 (MQ=255)

              tgtgCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGttt                                                                           >  1:5600885/1‑93 (MQ=255)

              tgtgCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGttt                                                                           <  2:933369/93‑1 (MQ=255)

               gtgCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGtttt                                                                          >  1:2148526/1‑93 (MQ=255)

               gtgCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGtttt                                                                          >  2:5471517/1‑93 (MQ=255)

                tgCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTc                                                                         <  2:4271491/93‑1 (MQ=255)

                tgCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTc                                                                         <  1:101713/93‑1 (MQ=255)

                 gCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTct                                                                        <  2:2837404/93‑1 (MQ=255)

                 gCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTct                                                                        <  2:5212334/93‑1 (MQ=255)

                  cTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTctg                                                                       >  1:3217870/1‑93 (MQ=255)

                   tGACTTTTGTCGTGCTGGTATTTGCTGTGGTATTGCCGGAAACCATTGCCGCGCCGTAACCGGATAAAGGCACTTATCCGGGGAGGTTTctgc                                                                      >  1:2554320/1‑93 (MQ=255)

                    gACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTctgct                                                                     >  1:6404339/1‑93 (MQ=255)

                    gACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTctgct                                                                     <  1:4172430/93‑1 (MQ=255)

                    gACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTctgct                                                                     >  2:5413120/1‑93 (MQ=255)

                       ttttGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGc                                                                  >  2:5780448/1‑93 (MQ=255)

                       ttttGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGc                                                                  >  1:5019316/1‑93 (MQ=255)

                        tttGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCt                                                                 <  1:4765879/93‑1 (MQ=255)

                        tttGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCt                                                                 >  2:3554280/1‑93 (MQ=255)

                         ttGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTc                                                                <  1:4409621/93‑1 (MQ=255)

                           gTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCg                                                              >  1:3637383/1‑93 (MQ=255)

                            tCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGc                                                             <  2:448350/93‑1 (MQ=255)

                              gTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTg                                                           >  1:3821366/1‑93 (MQ=255)

                                  tGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCaaa                                                       >  1:2075255/1‑93 (MQ=255)

                                  tGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCaaa                                                       <  1:6543446/93‑1 (MQ=255)

                                   ggTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAAt                                                      <  2:3722192/93‑1 (MQ=255)

                                     tATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAAttt                                                    <  2:6026158/93‑1 (MQ=255)

                                       tttGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTtg                                                  >  1:1663468/1‑93 (MQ=255)

                                         tGCGGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTtgat                                                <  1:2223390/93‑1 (MQ=255)

                                          gCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTtgatg                                               <  2:2033304/93‑1 (MQ=255)

                                          gCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTtgatg                                               >  1:944687/1‑93 (MQ=255)

                                           cTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTtgatga                                              <  2:3510178/93‑1 (MQ=255)

                                           cTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTtgatga                                              >  1:980317/1‑93 (MQ=255)

                                           cTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTtgatga                                              >  2:5933575/1‑93 (MQ=255)

                                           cTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTtgatga                                              >  2:6227025/1‑93 (MQ=255)

                                            tGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTgatgat                                             >  1:4155515/1‑93 (MQ=255)

                                            tGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTgatgat                                             <  1:1219282/93‑1 (MQ=255)

                                            tGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAACTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTgatgat                                             <  2:2017149/93‑1 (MQ=255)

                                              aGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGc                                           >  2:3279589/1‑93 (MQ=255)

                                              aGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGc                                           >  1:3668683/1‑93 (MQ=255)

                                              aGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGc                                           <  2:3904549/93‑1 (MQ=255)

                                              aGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGc                                           >  2:4890918/1‑93 (MQ=255)

                                                gTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCg                                         >  2:1807821/1‑93 (MQ=255)

                                                   ttGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGctg                                      >  1:810990/1‑93 (MQ=255)

                                                    tGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGctgg                                     <  1:6707025/93‑1 (MQ=255)

                                                     gCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGctggt                                    >  2:6716667/1‑93 (MQ=255)

                                                      ccGAAAACCATTGCCGCGCTGTGCCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGctggtc                                   <  2:3851/93‑1 (MQ=255)

                                                       cGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGctggtct                                  <  2:1894129/93‑1 (MQ=255)

                                                        gAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGctggtctg                                 >  2:853762/1‑93 (MQ=255)

                                                         aaaaCCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGctggtctgg                                >  2:5543423/1‑93 (MQ=255)

                                                         aaaaCCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGctggtctgg                                >  1:6612804/1‑93 (MQ=255)

                                                          aaaCCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGctggtctggt                               <  2:6458496/93‑1 (MQ=255)

                                                           aaCCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGtt                              >  2:4115843/1‑93 (MQ=255)

                                                            aCCATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTg                             <  2:2778142/93‑1 (MQ=255)

                                                             ccATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGc                            >  2:4088207/1‑93 (MQ=255)

                                                             ccATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGc                            <  2:2283931/93‑1 (MQ=255)

                                                             ccATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGc                            <  2:752282/93‑1 (MQ=255)

                                                              cATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCt                           >  1:1072751/1‑93 (MQ=255)

                                                              cATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCt                           >  1:1447362/1‑93 (MQ=255)

                                                              cATTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCt                           <  2:1906890/93‑1 (MQ=255)

                                                               aTTGCCGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTg                          >  2:4439385/1‑93 (MQ=255)

                                                                   ccGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTTGTCTGGTTGCTGAATg                      <  1:4848540/93‑1 (MQ=255)

                                                                   ccGCGCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATg                      >  1:2715184/1‑93 (MQ=255)

                                                                    cgcgCTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGc                     >  2:2504834/1‑93 (MQ=255)

                                                                     gcgcTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCt                    <  2:4566210/93‑1 (MQ=255)

                                                                      cgcTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTa                   <  1:2372159/93‑1 (MQ=255)

                                                                      cgcTGTACACGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTa                   <  2:5151357/93‑1 (MQ=255)

                                                                        cTGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATc                 >  2:3051294/1‑93 (MQ=255)

                                                                         tGTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCa                >  1:6259194/1‑93 (MQ=255)

                                                                          gTACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCAc               >  1:2309682/1‑93 (MQ=255)

                                                                           tACCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAAGTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATcccc              <  1:6035690/93‑1 (MQ=255)

                                                                            aCCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCAccc             <  2:3691750/93‑1 (MQ=255)

                                                                            aCCCGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATAAccc             >  1:3710462/1‑93 (MQ=255)

                                                                               cGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCACCCGTa          <  1:1825087/93‑1 (MQ=255)

                                                                               cGGAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCACCCGTa          >  2:1475288/1‑93 (MQ=255)

                                                                                ggAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCACCCGTAt         >  2:6570256/1‑93 (MQ=255)

                                                                                ggAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCACCCGTAt         <  2:1060690/93‑1 (MQ=255)

                                                                                 gAAAAAGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCACCCGTATg        >  1:2786303/1‑93 (MQ=255)

                                                                                  aaaaaGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCACCCGTATGc       <  2:264749/93‑1 (MQ=255)

                                                                                  aaaaaGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCACCCGTATGc       <  1:2943520/93‑1 (MQ=255)

                                                                                   aaaaGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCACCCGTATGCt      <  2:1115050/93‑1 (MQ=255)

                                                                                    aaaGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCACCCGTATGCTg     >  1:5135604/1‑93 (MQ=255)

                                                                                    aaaGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCACCCGTATGCTg     >  1:5590487/1‑93 (MQ=255)

                                                                                    aaaGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCACCCGTATGCTg     >  1:5843963/1‑93 (MQ=255)

                                                                                     aaGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCACCCGTATGCTGa    >  2:498379/1‑93 (MQ=255)

                                                                                      aGTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCACCCGTATGCTGAt   <  1:6671165/93‑1 (MQ=255)

                                                                                       gTCACTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCACCCGTATGCTGATg  >  2:4351710/1‑93 (MQ=255)

GCAATTGCGACTGGTGTGCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCGCTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCACCCGTATGCTGATG  >  NC_000913/2747076‑2747255

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`