| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,753,655 | T→C | intergenic (+256/‑525) | smpB → / → intA | small protein B/prophage CP4‑57 integrase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,753,655 | 0 | T | C | 99.2% | 829.7 / ‑5.7 | 262 | intergenic (+256/‑525) | smpB/intA | small protein B/prophage CP4‑57 integrase |
| Reads supporting (aligned to +/- strand): ref base T (2/0); new base C (117/142); total (120/142) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 267 total aligned reads displayed.
GAGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGTGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCT > NC_000913/2753565‑2753744 | gAGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGgcgc > 2:1510440/1‑93 (MQ=255) aGGCTTGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCa < 1:4722974/93‑1 (MQ=255) aGGCTGGTCATGGCGCTCATAAATCTGGTATACTTCCCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCa < 2:4014062/93‑1 (MQ=255) aGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCa < 1:5334242/93‑1 (MQ=255) aGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCa > 2:773653/1‑93 (MQ=255) ggCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCAt > 1:1036401/1‑93 (MQ=255) ggCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCAt < 2:468929/93‑1 (MQ=255) tgTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCg < 2:500793/92‑1 (MQ=255) ggTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCg < 2:1004265/93‑1 (MQ=255) gTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGa > 2:4261882/1‑93 (MQ=255) tCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAg > 1:1133822/1‑93 (MQ=255) tCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAg > 1:3464797/1‑93 (MQ=255) tCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAg > 1:6608986/1‑93 (MQ=255) tCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAg < 1:1320855/93‑1 (MQ=255) tGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAgggg > 2:4224616/1‑93 (MQ=255) tGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAgggg < 1:2292721/93‑1 (MQ=255) tGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAgggg < 2:4751731/93‑1 (MQ=255) gcgcTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCg < 2:5454559/93‑1 (MQ=255) gcTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGt < 1:773379/93‑1 (MQ=255) cTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGtt < 1:3358627/93‑1 (MQ=255) cTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGtt > 1:4478380/1‑93 (MQ=255) cATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGTGCATGCCGAGGGGCGGTTgg > 1:5911186/1‑93 (MQ=255) aaaTCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCt > 2:526323/1‑93 (MQ=255) aaaTCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCt < 1:4183046/93‑1 (MQ=255) aaTCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTc > 1:5577284/1‑93 (MQ=255) aaTCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTc < 2:11526/93‑1 (MQ=255) aTCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCg < 1:6396302/93‑1 (MQ=255) tGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCACGGCGCATGCCGAGGGGCGGTTGGCCTCGTaa > 2:6682577/1‑93 (MQ=255) tataCTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCTAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTaaaaa < 2:2279991/93‑1 (MQ=255) taCTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGc > 1:1466177/1‑93 (MQ=255) taCTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGc < 2:5861219/93‑1 (MQ=255) aCTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGcc > 1:3126845/1‑93 (MQ=255) cTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCg > 2:6146191/1‑93 (MQ=255) ttACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGc > 1:4609052/1‑93 (MQ=255) tACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCa > 2:1293177/1‑93 (MQ=255) tACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCa < 1:6127319/93‑1 (MQ=255) aCCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGCAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCaa > 2:734349/1‑93 (MQ=255) ccTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCaaa > 2:3937845/1‑93 (MQ=255) tttACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCaaaaa > 1:2677121/1‑93 (MQ=255) tttACACATGGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCaaaaa < 1:2465887/93‑1 (MQ=255) tACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCTAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAATAAAt > 2:50377/1‑93 (MQ=255) tACACATTGGGGCTGATTCTGGATGCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAAt < 1:154627/93‑1 (MQ=255) tcacaTTGGGGCTGATGCTGGATTCGACGGGATTTGCGAATCCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATa < 1:2053268/92‑1 (MQ=255) acacATTGGGTCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATa < 2:459035/93‑1 (MQ=255) acacATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATa < 2:4433784/93‑1 (MQ=255) acacATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATa > 1:3962809/1‑93 (MQ=255) acaTTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGt > 2:292818/1‑93 (MQ=255) acaTTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGt > 2:1700540/1‑93 (MQ=255) caTTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTc < 2:4513132/93‑1 (MQ=255) caTTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTc < 1:368667/93‑1 (MQ=255) caTTGGGGCTGATTCCGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGtg > 1:2190548/1‑92 (MQ=255) ttGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGc > 1:1698839/1‑93 (MQ=255) tGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCa > 2:2604008/1‑93 (MQ=255) ggggCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCaa < 2:6012889/93‑1 (MQ=255) ggCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAac < 1:3117464/93‑1 (MQ=255) tCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGaaa < 2:3546198/93‑1 (MQ=255) tCTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGaaa < 1:2702042/93‑1 (MQ=255) cTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGaaaa < 2:1990489/93‑1 (MQ=255) cTGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGaaaa > 2:2861072/1‑93 (MQ=255) tGGATTCGCCGGCATCTGCGAAACACAAGCCGCATGCAGAGTGTCGGTTGGCCTCTTAAAAAACCGCAAAAAATAGTCGCAAACGACGAAAAc < 2:4100166/93‑1 (MQ=255) tGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAAc > 1:6510366/1‑93 (MQ=255) tGGATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAAc > 1:5666243/1‑93 (MQ=255) ggATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGCAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACt < 1:2501275/93‑1 (MQ=255) gATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTa < 1:2353175/93‑1 (MQ=255) gATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTa > 2:841748/1‑93 (MQ=255) gATTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTa < 2:3318412/93‑1 (MQ=255) aTTCGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTAc < 2:934395/93‑1 (MQ=255) cGACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCt < 2:3049555/93‑1 (MQ=255) gACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCtt < 2:3747579/93‑1 (MQ=255) gACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCtt < 2:4394298/93‑1 (MQ=255) gACGGGATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCtt < 1:3269026/93‑1 (MQ=255) cGGTATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTa < 1:887810/93‑1 (MQ=255) ggATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTagc > 2:3244430/1‑93 (MQ=255) ggATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTagc > 1:4869876/1‑93 (MQ=255) gATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTagca < 2:2133430/93‑1 (MQ=255) gATTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTagca < 1:3553543/93‑1 (MQ=255) aTTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTagcag > 2:5660300/1‑93 (MQ=255) aTTTGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTagcag < 2:3504626/93‑1 (MQ=255) tttGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTagcagc > 1:3893148/1‑93 (MQ=255) ttGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCt < 1:4352699/93‑1 (MQ=255) ttGCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCt < 2:651798/93‑1 (MQ=255) gCGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTta > 1:3388756/1‑93 (MQ=255) cGAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaa > 2:2050731/1‑93 (MQ=255) gAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaat < 1:5849388/93‑1 (MQ=255) gAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaat < 2:588452/93‑1 (MQ=255) gAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaat > 2:3144695/1‑93 (MQ=255) gAAACCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaat > 2:2396538/1‑93 (MQ=255) aaaCCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAACAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaata > 2:6538673/1‑93 (MQ=255) aaaCCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaata > 2:4895315/1‑93 (MQ=255) aaCCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaataa > 1:6638211/1‑93 (MQ=255) aaCCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaataa < 1:5147216/93‑1 (MQ=255) aaCCCAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTtaataa > 2:628363/1‑93 (MQ=255) cccAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAAcc > 2:5542316/1‑93 (MQ=255) cccAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAAcc < 2:6408851/93‑1 (MQ=255) ccAAGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTGCGCTTTAGCAGCTTAATAACCt < 1:6051759/93‑1 (MQ=255) aaGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGc < 1:623418/93‑1 (MQ=255) aaGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGc < 1:2867945/93‑1 (MQ=255) aaGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGc < 1:3591539/93‑1 (MQ=255) aGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCt > 1:5043420/1‑93 (MQ=255) aGGCGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCt < 1:4062/93‑1 (MQ=255) | GAGGCTGGTCATGGCGCTCATAAATCTGGTATACTTACCTTTACACATTGGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGTGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAAACTACGCTTTAGCAGCTTAATAACCTGCT > NC_000913/2753565‑2753744 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |