BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,778,911	T→C	T656A (ACT→GCT)	ypjA ←	putative ATP‑binding component of a transport system

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,778,911	0	T	C	100.0%	919.6 / NA	278	T656A (ACT→GCT)	ypjA	putative ATP‑binding component of a transport system
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (142/136); total (142/136)

Only 100 of 282 total aligned reads displayed.

ATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGTGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGC  >  NC_000913/2778822‑2779000

  ataCCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCaa                                                                                      >  1:2737390/1‑93 (MQ=255)

   taCCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAAc                                                                                     <  1:6136339/93‑1 (MQ=255)

      cGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATc                                                                                  <  2:3977758/93‑1 (MQ=255)

       gTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCt                                                                                 >  2:5116145/1‑93 (MQ=255)

        tttGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCtt                                                                                >  1:6440056/1‑93 (MQ=255)

        tttGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGCTTGGGTGCCAGTACTATTGAGTAAATCGCCAACAtttt                                                                                >  1:4234422/1‑93 (MQ=255)

         ttgcttgcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCttt                                                                               <  1:3845853/93‑1 (MQ=255)

         ttgcttgcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCttt                                                                               <  2:1093834/93‑1 (MQ=255)

         ttgcttgcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCttt                                                                               <  1:2357820/93‑1 (MQ=255)

         ttgcttgcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTCGGTGCCAGCACTATTGAGTACAGCGCCAACATCttt                                                                               >  1:5486227/1‑93 (MQ=255)

             ttgcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCa                                                                           <  1:2530053/93‑1 (MQ=255)

             ttgcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCa                                                                           >  1:1337291/1‑93 (MQ=255)

               gcCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATa                                                                         >  2:3032389/1‑93 (MQ=255)

                  cccTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAAc                                                                      <  2:1354829/92‑1 (MQ=255)

                  aCCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAAc                                                                      <  2:5222155/93‑1 (MQ=255)

                  aCCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAAc                                                                      >  1:2258638/1‑93 (MQ=255)

                  aCCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAAc                                                                      >  2:6257734/1‑93 (MQ=255)

                   ccTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTGCAGCGCCAACATCTTTTCCATAAACa                                                                     <  1:318355/93‑1 (MQ=255)

                   ccTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACa                                                                     <  2:4581484/93‑1 (MQ=255)

                   ccTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACa                                                                     <  1:6692651/93‑1 (MQ=255)

                    cTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACAt                                                                    >  1:6044907/1‑93 (MQ=255)

                     tttGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTTGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATc                                                                   >  1:240482/1‑93 (MQ=255)

                     tttGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATc                                                                   <  1:6204598/93‑1 (MQ=255)

                      ttGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATcc                                                                  <  1:5962105/93‑1 (MQ=255)

                      ttGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATcc                                                                  <  1:3500280/93‑1 (MQ=255)

                        gATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAt                                                                <  1:5752466/93‑1 (MQ=255)

                        gATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAt                                                                <  2:5631666/93‑1 (MQ=255)

                         atatTTGCTTTATCGGAAGGGGCAC‑GGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAttt                                                              <  1:1725762/93‑1 (MQ=255)

                         atatTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAtt                                                               <  2:2258615/93‑1 (MQ=255)

                         atatTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAtt                                                               >  2:1166976/1‑93 (MQ=255)

                          tatTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAttt                                                              >  2:3183419/1‑93 (MQ=255)

                          tatTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCAttt                                                              >  2:385670/1‑93 (MQ=255)

                          tagttGCTTTATCAGAAGTGGCACTGCCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTACCATAAACATCCAttt                                                              <  1:1283790/90‑1 (MQ=255)

                            tttGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTg                                                            <  1:671003/93‑1 (MQ=255)

                              tGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTgac                                                          >  1:4794438/1‑91 (MQ=255)

                               gCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCg                                                         >  1:3726462/1‑93 (MQ=255)

                               gCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCg                                                         >  1:3036098/1‑93 (MQ=255)

                                 tttATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGtt                                                       >  1:774892/1‑93 (MQ=255)

                                   tATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTgg                                                     >  2:5849874/1‑93 (MQ=255)

                                   tATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTgg                                                     >  1:1404185/1‑93 (MQ=255)

                                    aTCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGc                                                    >  2:179239/1‑93 (MQ=255)

                                     tCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCa                                                   >  1:559260/1‑93 (MQ=255)

                                        gAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATta                                                >  2:72429/1‑93 (MQ=255)

                                          aGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATtaat                                              >  2:1923285/1‑93 (MQ=255)

                                          aGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATtaat                                              >  2:876384/1‑93 (MQ=255)

                                          aGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATtaat                                              <  2:4684845/93‑1 (MQ=255)

                                          aGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATtaat                                              <  1:4284070/93‑1 (MQ=255)

                                           gTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATtaata                                             <  2:5023169/93‑1 (MQ=255)

                                           gTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATtaata                                             >  2:5452372/1‑93 (MQ=255)

                                            tGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATtaataa                                            <  2:1578359/93‑1 (MQ=255)

                                            tGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATtaataa                                            <  2:2942017/93‑1 (MQ=255)

                                            tGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATtaataa                                            <  1:1855421/93‑1 (MQ=255)

                                            tGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATtaataa                                            <  2:4317720/93‑1 (MQ=255)

                                            tGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATtaataa                                            <  1:1213694/93‑1 (MQ=255)

                                             ggCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTaataat                                           >  2:1007751/1‑93 (MQ=255)

                                             ggCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTaataat                                           >  1:3605621/1‑93 (MQ=255)

                                              gCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATc                                          <  2:80480/93‑1 (MQ=255)

                                                 cTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCgtg                                       <  1:4669742/93‑1 (MQ=255)

                                                 cTGGCATATATTGTTTGGGCGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCgtg                                       >  1:6537429/1‑93 (MQ=255)

                                                  tGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCgtgt                                      <  1:1130043/93‑1 (MQ=255)

                                                  tGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCgtgt                                      >  2:4640883/1‑93 (MQ=255)

                                                   ggCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTc                                     <  1:1468151/93‑1 (MQ=255)

                                                   ggCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTc                                     <  1:3544867/93‑1 (MQ=255)

                                                   ggCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTc                                     >  2:2387574/1‑93 (MQ=255)

                                                    gCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCa                                    <  2:6419919/93‑1 (MQ=255)

                                                    gCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCa                                    >  2:4006080/1‑93 (MQ=255)

                                                    gCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCa                                    >  1:2112940/1‑93 (MQ=255)

                                                    gCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCa                                    >  2:2838546/1‑93 (MQ=255)

                                                      atatatTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAAc                                  <  2:2100680/93‑1 (MQ=255)

                                                      atatatTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAAc                                  <  2:580358/93‑1 (MQ=255)

                                                       tatatTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACt                                 <  1:3889641/93‑1 (MQ=255)

                                                       tatatTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACt                                 >  2:3428152/1‑93 (MQ=255)

                                                       tatatTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACt                                 <  1:2982178/93‑1 (MQ=255)

                                                         tatTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTgc                               <  2:2033874/93‑1 (MQ=255)

                                                         tatTGTTTGGGTGCCAGCACTATAGAGTACAGCGCCAACATCTTTTACATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTgc                               >  1:5373132/1‑93 (MQ=255)

                                                          atTGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTgcg                              >  2:4036874/1‑93 (MQ=255)

                                                           ttGTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTgcgc                             >  1:3245912/1‑93 (MQ=255)

                                                             gTTTGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCgg                           <  1:6344531/93‑1 (MQ=255)

                                                              tttGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCggg                          >  2:3681083/1‑93 (MQ=255)

                                                              tttGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCggg                          <  2:2760555/93‑1 (MQ=255)

                                                               ttGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGa                         <  2:4224978/93‑1 (MQ=255)

                                                               ttGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGa                         <  2:4045448/93‑1 (MQ=255)

                                                                tGGGTGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGaa                        >  1:902049/1‑93 (MQ=255)

                                                                    tGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAg                    <  2:162807/93‑1 (MQ=255)

                                                                    tGCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAg                    <  1:1953414/93‑1 (MQ=255)

                                                                     tccAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGt                   <  1:3942553/92‑1 (MQ=255)

                                                                     gCCAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGt                   <  1:4524162/93‑1 (MQ=255)

                                                                      ccAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTg                  <  1:3398729/93‑1 (MQ=255)

                                                                       cAGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTga                 >  1:1009332/1‑93 (MQ=255)

                                                                        aGCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTgac                >  1:4964449/1‑93 (MQ=255)

                                                                         gCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTgacg               >  2:2302732/1‑93 (MQ=255)

                                                                         gCACTATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTgacg               >  2:3739329/1‑93 (MQ=255)

                                                                             tATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTg           <  1:4192495/93‑1 (MQ=255)

                                                                             tATTGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTg           <  1:6631472/93‑1 (MQ=255)

                                                                               ttGAGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGtt         >  1:4709397/1‑93 (MQ=255)

                                                                                  aGTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAAt      <  1:3437446/93‑1 (MQ=255)

                                                                                   gTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATg     >  2:4777047/1‑93 (MQ=255)

                                                                                   gTACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATg     >  2:3650753/1‑93 (MQ=255)

                                                                                    tACAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGa    <  2:59295/93‑1 (MQ=255)

                                                                                      cAGCGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGc  >  2:6676459/1‑93 (MQ=255)

ATATACCGTTTGCTTGCCACCTTTGATATTTGCTTTATCAGAAGTGGCACTGGCATATATTGTTTGGGTGCCAGCACTATTGAGTACAGTGCCAACATCTTTTCCATAAACATCCATTTTGCCGTTGGCATTAATAATCGTGTCAACTGCGCGGGAACCAGTGACGACTGTTAATGAGC  >  NC_000913/2778822‑2779000

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`