BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,794,501	A→G	S103P (TCT→CCT)	ygaU ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,794,501	0	A	G	100.0%	718.3 / NA	218	S103P (TCT→CCT)	ygaU	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (137/81); total (137/81)

Only 100 of 219 total aligned reads displayed.

TTAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGACTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCACCG  >  NC_000913/2794411‑2794590

ttAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCt                                                                                         <  2:2601910/93‑1 (MQ=255)

ttAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCt                                                                                         <  1:3182466/93‑1 (MQ=255)

   gCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTaa                                                                                      >  2:4609023/1‑93 (MQ=255)

      tCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACgg                                                                                   >  1:4057742/1‑93 (MQ=255)

      tCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACgg                                                                                   >  2:1731784/1‑93 (MQ=255)

        ggTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGta                                                                                 >  2:323548/1‑93 (MQ=255)

        ggTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGta                                                                                 <  1:2120629/93‑1 (MQ=255)

        ggTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGta                                                                                 >  2:596605/1‑93 (MQ=255)

         gTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGtat                                                                                <  1:1868719/93‑1 (MQ=255)

          tttATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGtata                                                                               >  1:350131/1‑93 (MQ=255)

           ttATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATaa                                                                              >  1:6688271/1‑93 (MQ=255)

            tATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATaaa                                                                             >  2:5055392/1‑93 (MQ=255)

             aTTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATaaaa                                                                            >  1:2491138/1‑93 (MQ=255)

             aTTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATaaaa                                                                            <  1:3360369/93‑1 (MQ=255)

             aTTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATaaaa                                                                            >  2:4719318/1‑93 (MQ=255)

              ttCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAAc                                                                           <  2:2069733/93‑1 (MQ=255)

              ttCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAAc                                                                           >  2:2529920/1‑93 (MQ=255)

               tCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAAct                                                                          <  1:4508065/93‑1 (MQ=255)

               tCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAAct                                                                          <  2:1494103/93‑1 (MQ=255)

                cccTTCGAAGATTGTATTGTACAGATTAGCGTTACCGTAGAGCTGTTTGGAAAGGGCACTAAGAGTGTCGCCAGGCTTAACGGTATAAAActg                                                                         <  1:278583/91‑1 (MQ=255)

                 gCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActgg                                                                        <  2:6272325/93‑1 (MQ=255)

                 gCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActgg                                                                        >  2:1974044/1‑93 (MQ=255)

                   ttCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActggct                                                                      <  1:665144/93‑1 (MQ=255)

                   ttCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActggct                                                                      >  1:6266343/1‑93 (MQ=255)

                    tCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActggctg                                                                     >  2:1165743/1‑93 (MQ=255)

                    tCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActggctg                                                                     <  2:5364547/93‑1 (MQ=255)

                     cGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAActggctgg                                                                    >  1:779927/1‑93 (MQ=255)

                      gAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACtggctggc                                                                   >  1:5268830/1‑93 (MQ=255)

                       aaGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCa                                                                  >  1:834721/1‑93 (MQ=255)

                       aaGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCa                                                                  >  2:1597630/1‑93 (MQ=255)

                        aGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAg                                                                 >  2:6671556/1‑93 (MQ=255)

                          aTTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTg                                                               >  1:1489200/1‑93 (MQ=255)

                           ttttATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTgg                                                              >  1:4230231/1‑93 (MQ=255)

                           ttttATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTgg                                                              >  2:5503368/1‑93 (MQ=255)

                           ttttATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTgg                                                              >  1:5785263/1‑93 (MQ=255)

                            tttATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGc                                                             >  2:6394795/1‑93 (MQ=255)

                             ttATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCt                                                            <  1:1655162/93‑1 (MQ=255)

                               aTTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTgg                                                          >  2:2770292/1‑93 (MQ=255)

                               aTTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTgg                                                          <  1:2738396/93‑1 (MQ=255)

                               aTTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTgg                                                          <  1:5027770/93‑1 (MQ=255)

                                ttGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTggg                                                         >  1:2385727/1‑92 (MQ=255)

                                 tGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGgtg                                                        <  2:6009807/93‑1 (MQ=255)

                                  gTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGgtgt                                                       >  1:3918620/1‑93 (MQ=255)

                                     cAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGc                                                    <  1:5523787/93‑1 (MQ=255)

                                     cAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGc                                                    <  2:458500/93‑1 (MQ=255)

                                       gATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCg                                                  >  2:3066434/1‑93 (MQ=255)

                                        aTTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGt                                                 <  1:2931478/93‑1 (MQ=255)

                                        aTTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGt                                                 <  2:5855022/93‑1 (MQ=255)

                                        aTTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGt                                                 <  1:4317463/93‑1 (MQ=255)

                                         ttAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGTTGTCGCCGtt                                                >  2:5760039/1‑93 (MQ=255)

                                          tAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGttt                                               <  1:5072801/93‑1 (MQ=255)

                                            gCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTc                                             >  2:1771399/1‑93 (MQ=255)

                                               ttACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGGCGCCGTTTTCAcc                                          >  1:1725559/1‑93 (MQ=255)

                                               ttACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGGGTCGGCGgttttccc                                          >  1:3862614/1‑89 (MQ=255)

                                                tgccGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCt                                         >  1:6412738/3‑93 (MQ=255)

                                                tACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCt                                         <  1:6053720/93‑1 (MQ=255)

                                                tACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCt                                         >  2:4428242/1‑93 (MQ=255)

                                                tACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCt                                         >  1:1331273/1‑93 (MQ=255)

                                                 aCCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTTAACTg                                        >  2:3927022/1‑93 (MQ=255)

                                                  ccGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGTTGTCGCCGTTTTCACCTGa                                       <  1:6529067/93‑1 (MQ=255)

                                                   cGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGat                                      >  2:1220291/1‑93 (MQ=255)

                                                    gTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGatc                                     >  1:4143396/1‑93 (MQ=255)

                                                     tAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTTACCTGatca                                    >  1:4557389/1‑93 (MQ=255)

                                                      aGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGatcat                                   >  2:5306580/1‑93 (MQ=255)

                                                      aGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGatcat                                   >  1:5687675/1‑93 (MQ=255)

                                                       gACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCAACTGatcatc                                  >  2:6611714/1‑93 (MQ=255)

                                                        aCCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCg                                 >  2:4156150/1‑93 (MQ=255)

                                                         ccTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCGGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGa                                >  2:1620098/1‑93 (MQ=255)

                                                         ccTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGa                                >  1:3642250/1‑93 (MQ=255)

                                                          cTGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGac                               >  2:1954518/1‑93 (MQ=255)

                                                           tGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGaca                              >  1:2197795/1‑93 (MQ=255)

                                                           tGTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGaca                              >  1:1070722/1‑93 (MQ=255)

                                                            gTTTGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGacac                             <  1:2825531/93‑1 (MQ=255)

                                                             tttGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACt                            <  2:1311161/93‑1 (MQ=255)

                                                             tttGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACt                            <  2:696051/93‑1 (MQ=255)

                                                              ttGGAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTg                           <  1:4340061/93‑1 (MQ=255)

                                                                ggAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGc                         <  2:908062/93‑1 (MQ=255)

                                                                ggAAATGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGc                         <  2:3127986/93‑1 (MQ=255)

                                                                  aaaTGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCaa                       <  1:6189384/93‑1 (MQ=255)

                                                                    aTGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATa                     >  1:958678/1‑93 (MQ=255)

                                                                    aTGGCACTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATa                     <  2:4919377/93‑1 (MQ=255)

                                                                     tGGCGCTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATAc                    <  2:3755515/93‑1 (MQ=255)

                                                                         aCTCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCCGa                >  1:4753400/1‑93 (MQ=255)

                                                                           tCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGaaa              <  2:5183215/93‑1 (MQ=255)

                                                                           tCAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGaaa              >  1:4575762/1‑93 (MQ=255)

                                                                            cAGAGTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAat             <  2:2474203/93‑1 (MQ=255)

                                                                            cAGAGGGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGGTTTGACCTGATCATCGAAACTAGCAAAACCGGaaaa             >  1:6156955/1‑92 (MQ=255)

                                                                              gagTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAatat           >  1:1703302/1‑93 (MQ=255)

                                                                              gagTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCCGAAatat           >  1:1164920/1‑93 (MQ=255)

                                                                               agTGTCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATAtt          <  1:413096/93‑1 (MQ=255)

                                                                                gtgtCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTc         <  1:6600635/93‑1 (MQ=255)

                                                                                gtgtCGCCAGGCTTAACGGTATAAAACTGGCTGGAAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTc         >  1:1127881/1‑93 (MQ=255)

                                                                                 tgtCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTcc        <  1:4639417/93‑1 (MQ=255)

                                                                                 tgtCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTcc        >  1:1361030/1‑93 (MQ=255)

                                                                                   tCGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGGGTCGCCGTTTTCACCTGATCATCGATACTGGCAATACCGGAAATATTtccc      >  1:143158/1‑93 (MQ=255)

                                                                                   gcGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTcccc      <  2:1795704/92‑1 (MQ=255)

                                                                                    cGCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCa     <  1:256721/93‑1 (MQ=255)

                                                                                     gCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCAc    <  2:4497724/93‑1 (MQ=255)

                                                                                     gCCAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCAc    <  2:3351022/93‑1 (MQ=255)

                                                                                       cAGGCTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGGCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCACCg  >  1:689630/1‑93 (MQ=255)

TTAGCATCGGTTTATTCGCTTCGAAGATTTTATTGTACAGATTAGCGTTACCGTAGACCTGTTTGGAAATGGCACTCAGAGTGTCGCCAGACTTAACGGTATAAAACTGGCTGGCAGTGGCTGGTGTCGCCGTTTTCACCTGATCATCGACACTGGCAATACCGGAAATATTCCCCACCG  >  NC_000913/2794411‑2794590

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`