Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,806,271 T→C intergenic (+126/‑1367) proX → / → b2682 high‑affinity transport system for glycine betaine and proline/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,806,2710TC99.2% 882.3 / NA 268intergenic (+126/‑1367)proX/b2682high‑affinity transport system for glycine betaine and proline/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (111/155);  minor base A (2/0);  total (113/155)
Fisher's exact test for biased strand distribution p-value = 1.77e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 276 total aligned reads displayed.

CCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCATCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCTT  >  NC_000913/2806181‑2806360
                                                                                          |                                                                                         
 cgccgTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCAcccc                                                                                        >  1:3996068/1‑93 (MQ=255)
    cgTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCata                                                                                     <  1:2158806/93‑1 (MQ=255)
    cgTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCata                                                                                     >  1:2266751/1‑93 (MQ=255)
    cgTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCata                                                                                     >  2:1942858/1‑93 (MQ=255)
    cgTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCata                                                                                     >  2:4336791/1‑93 (MQ=255)
     gTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCatat                                                                                    >  1:567836/1‑93 (MQ=255)
     gTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCatat                                                                                    <  1:857120/93‑1 (MQ=255)
      ttCTGTGCACAATGCGTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATAtt                                                                                   >  1:6119610/1‑93 (MQ=255)
        cTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATtca                                                                                 <  1:287922/93‑1 (MQ=255)
        cTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATtca                                                                                 >  2:2524843/1‑93 (MQ=255)
          gtgCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATtcatc                                                                               <  2:5926740/93‑1 (MQ=255)
           tgCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATtcatca                                                                              <  1:1857650/93‑1 (MQ=255)
            gCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCaa                                                                             <  2:3720489/93‑1 (MQ=255)
            gCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCaa                                                                             >  2:1455808/1‑93 (MQ=255)
            gCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCaa                                                                             <  2:1711697/93‑1 (MQ=255)
              acaATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACa                                                                           <  1:4130589/93‑1 (MQ=255)
                aaTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATc                                                                         <  1:5624309/93‑1 (MQ=255)
                 aTGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTTAACCCATATTTATCCACATcc                                                                        >  1:1178050/1‑93 (MQ=25)
                   gCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGc                                                                      >  2:1299308/1‑93 (MQ=255)
                   gCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGc                                                                      <  2:1878424/93‑1 (MQ=255)
                   gCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGc                                                                      <  2:627208/93‑1 (MQ=255)
                      ttgggCGACGTTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCtat                                                                   <  1:5860564/89‑1 (MQ=38)
                      tGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCtat                                                                   <  1:1029613/93‑1 (MQ=255)
                      tGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCtat                                                                   <  2:6095444/93‑1 (MQ=255)
                      tGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCtat                                                                   <  2:3325246/93‑1 (MQ=255)
                       gATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCAACCCATATTCATCAACATCCGAtatt                                                                  >  1:2501642/1‑93 (MQ=255)
                        aTGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCtatta                                                                 <  2:2225533/93‑1 (MQ=255)
                         tGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCtattat                                                                <  1:1912866/93‑1 (MQ=255)
                          gCGTCGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTattatt                                                               <  1:1326790/93‑1 (MQ=255)
                          gCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTattatt                                                               <  1:3387028/93‑1 (MQ=255)
                             gcGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGAt                                                            <  1:1009554/92‑1 (MQ=255)
                             aCGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGAt                                                            >  1:1396027/1‑93 (MQ=255)
                                 tGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTcc                                                        <  2:6667512/93‑1 (MQ=255)
                                 tGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTcc                                                        >  2:5489477/1‑93 (MQ=255)
                                  ggCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCa                                                       <  2:6466206/93‑1 (MQ=255)
                                  ggCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCa                                                       >  1:4032265/1‑93 (MQ=255)
                                   gcgcGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAg                                                      <  2:67280/93‑1 (MQ=255)
                                    cgcgTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGc                                                     >  1:3483908/1‑93 (MQ=255)
                                     gcgTCTTATCACGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCt                                                    <  1:766552/93‑1 (MQ=255)
                                      cgTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCtt                                                   >  2:453944/1‑93 (MQ=255)
                                        tCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTaa                                                 >  2:5281314/1‑93 (MQ=255)
                                        tCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTaa                                                 <  1:3134634/93‑1 (MQ=255)
                                        tCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTaa                                                 <  2:241808/93‑1 (MQ=255)
                                         cTTATCATGCCTACAAACCACATCGCACATTTCAACGATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAat                                                <  1:6056267/93‑1 (MQ=255)
                                         cTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAat                                                <  1:2779520/93‑1 (MQ=255)
                                         cTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAat                                                <  1:4557283/93‑1 (MQ=255)
                                           tATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTTCAGCTTAatca                                              >  1:2581410/1‑93 (MQ=255)
                                             tCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAatcatc                                            >  2:2128269/1‑93 (MQ=255)
                                              cATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAAtcatca                                           <  1:5144560/93‑1 (MQ=255)
                                                tGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCAcc                                         >  2:2576240/1‑93 (MQ=255)
                                                tGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCAcc                                         >  1:6192634/1‑93 (MQ=255)
                                                 gCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCt                                        <  1:4428239/93‑1 (MQ=255)
                                                   cTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCtga                                      <  2:1485752/93‑1 (MQ=255)
                                                   cTACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCtga                                      >  2:6193543/1‑93 (MQ=255)
                                                    tACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCtgat                                     <  2:3232177/93‑1 (MQ=255)
                                                    tACAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCtgat                                     <  1:2045814/93‑1 (MQ=255)
                                                     aCAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCtgatg                                    >  1:2610573/1‑93 (MQ=255)
                                                     aCAAACCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCtgatg                                    <  2:6359074/93‑1 (MQ=255)
                                                       aaaCCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGaa                                  <  2:4233282/93‑1 (MQ=255)
                                                         aCCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACa                                >  1:918795/1‑93 (MQ=255)
                                                         aCCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACa                                >  2:2553303/1‑93 (MQ=255)
                                                         aCCACATCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACa                                >  2:384174/1‑93 (MQ=255)
                                                             caTCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACaaaaa                            >  2:4889300/1‑93 (MQ=255)
                                                               tCGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAaata                          <  2:1605446/93‑1 (MQ=255)
                                                               tCGCACATTTCAACAATCTATCTTTCACCCCATATGCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAaata                          <  2:730867/93‑1 (MQ=255)
                                                                cGCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAaataa                         <  1:1579982/93‑1 (MQ=255)
                                                                 gCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAaataat                        <  2:2912597/93‑1 (MQ=255)
                                                                 gCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAaataat                        <  2:5745050/93‑1 (MQ=255)
                                                                 gCACATTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAaataat                        >  1:1374403/1‑93 (MQ=255)
                                                                   acaTTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGa                      >  1:5410766/1‑93 (MQ=255)
                                                                    caTTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGAc                     <  2:4003455/93‑1 (MQ=255)
                                                                    caTTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGAc                     <  2:5624084/93‑1 (MQ=255)
                                                                    caTTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGAc                     <  1:4320224/93‑1 (MQ=255)
                                                                     aTTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACt                    >  1:3360030/1‑93 (MQ=255)
                                                                     aTTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACt                    >  2:1180341/1‑93 (MQ=255)
                                                                     aTTTCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACt                    >  2:2463198/1‑93 (MQ=255)
                                                                      tttCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTa                   >  1:2415909/1‑93 (MQ=255)
                                                                       ttCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTaa                  <  1:5273413/93‑1 (MQ=255)
                                                                       ttCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTaa                  <  2:4966272/93‑1 (MQ=255)
                                                                        tCAACAATCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTaaa                 <  2:2989118/93‑1 (MQ=255)
                                                                         caacaaTCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAAc                <  2:3401673/93‑1 (MQ=255)
                                                                          aacaaTCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAAcc               >  1:2189894/1‑93 (MQ=255)
                                                                           acaaTCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCt              >  2:5018414/1‑93 (MQ=255)
                                                                            caaTCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTa             <  1:249569/93‑1 (MQ=255)
                                                                             aaTCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTaa            >  1:1708638/1‑93 (MQ=255)
                                                                             aaTCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTaa            <  1:4690358/93‑1 (MQ=255)
                                                                             aaTCTATCTTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTaa            <  1:372947/93‑1 (MQ=255)
                                                                              atctatctTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAAt           <  2:2012568/93‑1 (MQ=255)
                                                                               tctatctTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATc          <  1:3569913/93‑1 (MQ=255)
                                                                                 tatctTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCAt        >  2:4452446/1‑93 (MQ=255)
                                                                                 tatctTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCAt        >  1:3916825/1‑93 (MQ=255)
                                                                                 tatctTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCAt        <  1:1973025/93‑1 (MQ=255)
                                                                                  atctTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATg       >  1:6655252/1‑93 (MQ=255)
                                                                                   tctTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGa      <  1:5490013/93‑1 (MQ=255)
                                                                                   tctTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGa      <  1:3794166/93‑1 (MQ=255)
                                                                                   tctTTCACCCCATATTCATCAACATCCGCTATTATTGATTTCAAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGa      >  2:4687881/1‑93 (MQ=255)
                                                                                     tttCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGc    <  2:5411038/93‑1 (MQ=255)
                                                                                     tttCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGc    <  1:6349898/93‑1 (MQ=255)
                                                                                      ttCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCt   <  2:3785985/93‑1 (MQ=255)
                                                                                       tCACCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCtt  <  2:318813/93‑1 (MQ=255)
                                                                                          |                                                                                         
CCGCCGTTCTGTGCACAATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACAAACCACATCGCACATTTCAACAATCTATCTTTCATCCCATATTCATCAACATCCGCTATTATTGATTTCCAGCTTAATCATCACCTGATGAACAAAAATAATGACTAAACCTAATCATGAGCTT  >  NC_000913/2806181‑2806360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: