BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,830,181	T→C	L69L (CTA→CTG)	ygaA ←	putative 2‑component transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,830,181	0	T	C	100.0%	784.6 / NA	239	L69L (CTA→CTG)	ygaA	putative 2‑component transcriptional regulator
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (134/105); total (134/105)

Only 100 of 246 total aligned reads displayed.

TGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGTAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTGGTGACCAATCCCACGCTGCAA  >  NC_000913/2830091‑2830270

tGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAg                                                                                         >  2:5454517/1‑93 (MQ=255)

 ggATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGc                                                                                        >  2:6555659/1‑93 (MQ=255)

 ggATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGc                                                                                        >  2:6596206/1‑93 (MQ=255)

    tGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGACGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAAc                                                                                     >  2:2209718/1‑93 (MQ=255)

     gCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACg                                                                                    <  1:3838618/93‑1 (MQ=255)

      cccTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGc                                                                                   >  1:552171/1‑93 (MQ=255)

      cccTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGc                                                                                   >  1:3734158/1‑93 (MQ=255)

       ccTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCa                                                                                  <  2:5836883/93‑1 (MQ=255)

       ccTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCa                                                                                  <  2:5767776/93‑1 (MQ=255)

         ttCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGa                                                                                <  2:715268/93‑1 (MQ=255)

         ttCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGa                                                                                <  1:2508453/93‑1 (MQ=255)

             aGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCa                                                                            >  2:6200129/1‑93 (MQ=255)

              gcgcAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCAt                                                                           >  2:5173762/1‑93 (MQ=255)

                 cAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGc                                                                        >  2:1135110/1‑93 (MQ=255)

                 cAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGc                                                                        >  2:455222/1‑93 (MQ=255)

                  aaaGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCa                                                                       >  1:892068/1‑93 (MQ=255)

                   aaGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCAc                                                                      >  2:2530776/1‑93 (MQ=255)

                   aaGCGTCTACCGAGTACACCCTCTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCAc                                                                      <  1:1498829/93‑1 (MQ=255)

                    aGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACt                                                                     >  2:1378482/1‑93 (MQ=255)

                    aGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACt                                                                     <  1:2142955/93‑1 (MQ=255)

                      ggTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTcc                                                                   <  1:6481913/92‑1 (MQ=255)

                       gTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCa                                                                  <  1:5738865/93‑1 (MQ=255)

                       gTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCa                                                                  >  1:2371744/1‑93 (MQ=255)

                        tCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAg                                                                 >  1:2924814/1‑93 (MQ=255)

                        tCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATAGTAACGCAGCAACGCAGACGCATCGCACTCCAg                                                                 >  2:4223088/1‑93 (MQ=255)

                         cTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGc                                                                <  2:147636/93‑1 (MQ=255)

                           aCCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCAc                                                              >  2:5643023/1‑93 (MQ=255)

                            ccGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCAcc                                                             <  2:808260/93‑1 (MQ=255)

                             cGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCt                                                            <  1:6313291/93‑1 (MQ=255)

                             cGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCt                                                            >  2:4486942/1‑93 (MQ=255)

                              gAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTg                                                           >  2:5717369/1‑93 (MQ=255)

                              gAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTg                                                           >  1:3529680/1‑93 (MQ=255)

                              gAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTg                                                           >  1:5295447/1‑93 (MQ=255)

                              gAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTg                                                           >  2:5990545/1‑93 (MQ=255)

                               aGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGa                                                          <  1:602836/93‑1 (MQ=255)

                               aGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGa                                                          >  1:5228459/1‑93 (MQ=255)

                                gTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGAc                                                         >  1:3242088/1‑93 (MQ=255)

                                gTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGAc                                                         >  1:5476476/1‑93 (MQ=255)

                                gTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGAc                                                         >  1:4424321/1‑93 (MQ=255)

                                 tACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACg                                                        >  2:4661227/1‑93 (MQ=255)

                                   cATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTa                                                      <  2:3584599/93‑1 (MQ=255)

                                     tCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGc                                                    >  1:3103495/1‑93 (MQ=255)

                                      ccTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCg                                                   <  2:325908/93‑1 (MQ=255)

                                      ccTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCg                                                   >  1:504594/1‑93 (MQ=255)

                                      ccTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCg                                                   >  2:2752975/1‑93 (MQ=255)

                                       cTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCgt                                                  <  1:318701/93‑1 (MQ=255)

                                        tttGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCgtg                                                 >  1:3966597/1‑93 (MQ=255)

                                          tGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCgtggg                                               >  1:4300071/1‑92 (MQ=255)

                                            ccAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGa                                             >  1:2635185/1‑93 (MQ=255)

                                            ccAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGa                                             <  2:2921985/93‑1 (MQ=255)

                                            ccAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGa                                             <  2:5377998/93‑1 (MQ=255)

                                             cAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGAt                                            >  1:1107334/1‑93 (MQ=255)

                                             cAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGAt                                            <  1:241397/93‑1 (MQ=255)

                                             cAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAACCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGAt                                            <  2:2803217/93‑1 (MQ=255)

                                              aGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATc                                           >  2:1197036/1‑93 (MQ=255)

                                              aGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATc                                           >  2:552867/1‑93 (MQ=255)

                                              aGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATc                                           <  1:6282279/93‑1 (MQ=255)

                                                aCCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAg                                         <  2:4099518/93‑1 (MQ=255)

                                                 ccGTCGATGGCAAGCGGAATACACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAgg                                        >  1:3001035/1‑93 (MQ=255)

                                                   gTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGgcg                                      >  2:6328617/1‑93 (MQ=255)

                                                    tCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTAACGTAGCGTGGTGATCAGgcgc                                     >  1:1609782/1‑93 (MQ=255)

                                                     cGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCt                                    >  2:2285229/1‑93 (MQ=255)

                                                      gATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTg                                   >  2:2098961/1‑93 (MQ=255)

                                                      gATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTg                                   >  2:4291839/1‑93 (MQ=255)

                                                      gATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTg                                   >  1:6422825/1‑93 (MQ=255)

                                                        tGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGaa                                 >  2:6644971/1‑93 (MQ=255)

                                                        tGGCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGaa                                 >  2:3711280/1‑93 (MQ=255)

                                                          gCAAGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGaaaa                               >  2:2450476/1‑93 (MQ=255)

                                                            aaGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACg                             <  1:2958050/93‑1 (MQ=255)

                                                             aGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGa                            <  1:5990056/93‑1 (MQ=255)

                                                             aGCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGa                            >  2:5272798/1‑93 (MQ=255)

                                                              gCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGAt                           >  2:3161606/1‑93 (MQ=255)

                                                              gCGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGAt                           <  1:3360411/93‑1 (MQ=255)

                                                               cGGAATAACCTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATc                          <  2:2689395/93‑1 (MQ=255)

                                                               cGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATc                          <  2:1705109/93‑1 (MQ=255)

                                                               cGGAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATc                          <  2:2076604/93‑1 (MQ=255)

                                                                 gAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCt                        >  1:1902017/1‑93 (MQ=255)

                                                                 gAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCt                        <  1:1951358/93‑1 (MQ=255)

                                                                 gAATAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCt                        <  1:738500/93‑1 (MQ=255)

                                                                  aaTAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTg                       <  2:1282552/93‑1 (MQ=255)

                                                                  aaTAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTg                       >  2:3993689/1‑93 (MQ=255)

                                                                    tAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTGGt                     >  1:3388702/1‑93 (MQ=255)

                                                                    tAAACTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTGGt                     >  1:173740/1‑93 (MQ=255)

                                                                     aaaCTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTGGTg                    <  2:1875538/93‑1 (MQ=255)

                                                                       aCTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTGGTGAc                  <  2:1783249/93‑1 (MQ=255)

                                                                       aCTGCCGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTGGTGAc                  >  2:5482457/1‑93 (MQ=255)

                                                                           ccGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTGGTGACCAAt              <  1:512034/93‑1 (MQ=255)

                                                                           ccGCGAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTGGTGACCAAt              <  2:5236786/93‑1 (MQ=255)

                                                                             gcgAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTGGTGACCAATcc            >  1:4944437/1‑93 (MQ=255)

                                                                             gcgAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTGGTGACCAATcc            <  1:2707207/93‑1 (MQ=255)

                                                                             gcgAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTGGTGACCAATcc            <  1:5833462/93‑1 (MQ=255)

                                                                               gAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAATTATCCTGGGGACCAATCCCa          >  1:2201034/1‑93 (MQ=255)

                                                                               gAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTGGTGACCAATCCCa          <  1:4085761/93‑1 (MQ=255)

                                                                               gAATCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTGGTGACCAAGCCCa          <  1:838300/93‑1 (MQ=255)

                                                                                 aTCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTGGTGACCAATCCCACg        >  2:814207/1‑93 (MQ=255)

                                                                                 aTCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTGGTGACCAATCCCACg        >  1:1344027/1‑93 (MQ=255)

                                                                                  tCGTAACGCAGCAACGCAGACTCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTGGTGACCAATCCCACGc       <  1:5690188/93‑1 (MQ=255)

                                                                                  tCGTAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTGGTGACCAATCCCACGc       <  1:2819087/93‑1 (MQ=255)

                                                                                     tAACGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTGGTGACCAATCCCACGCTGc    >  2:5138792/1‑93 (MQ=255)

                                                                                       aCGCAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTGGTGACCAATCCCACGCTGCaa  <  1:6657035/93‑1 (MQ=255)

TGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGTAGCAACGCAGACGCATCGCACTCCAGCACCTGACGTAGCGTGGTGATCAGGCGCTGAAAACGATCCTGGTGACCAATCCCACGCTGCAA  >  NC_000913/2830091‑2830270

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`