BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	332,530	T→C	P312P (CCT→CCC)	yahA →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	332,530	0	T	C	100.0%	858.8 / NA	265	P312P (CCT→CCC)	yahA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (136/129); total (136/129)

Only 100 of 272 total aligned reads displayed.

AAGATCGATAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCTGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGCTATTT  >  NC_000913/332441‑332619

aaGATCGATAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCggc                                                                                        >  2:4298399/1‑92 (MQ=255)

aaGATCGATAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGt                                                                                        <  2:4638410/93‑1 (MQ=255)

  gATCGATAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCt                                                                                      <  1:1027698/93‑1 (MQ=255)

   aTCGATAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTg                                                                                     <  2:6572214/93‑1 (MQ=255)

   aTCGATAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTg                                                                                     >  1:5393639/1‑93 (MQ=255)

      gATAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGt                                                                                  <  2:6249475/93‑1 (MQ=255)

       aTAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCAAACTAGCGCGTAAGCCCGGTCTGAGTa                                                                                 <  1:5598507/93‑1 (MQ=255)

         aaGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAATTAGCGCGTAAGCCCGGTCTGAGTATc                                                                               >  1:6170695/1‑93 (MQ=255)

         aaGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATc                                                                               >  1:151301/1‑93 (MQ=255)

         aaGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATc                                                                               <  2:2877003/93‑1 (MQ=255)

          aGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCg                                                                              >  2:2005073/1‑93 (MQ=255)

           gTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGt                                                                             <  2:3318690/93‑1 (MQ=255)

           gTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGt                                                                             <  2:5526737/93‑1 (MQ=255)

           gTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCAGATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGt                                                                             <  2:5341056/93‑1 (MQ=255)

            tCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTg                                                                            >  2:5689825/1‑93 (MQ=255)

            tCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTg                                                                            <  1:2391903/93‑1 (MQ=255)

             cATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTgg                                                                           >  2:4234453/1‑93 (MQ=255)

              aTTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGc                                                                          >  1:5197515/1‑93 (MQ=255)

               tttGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCg                                                                         >  2:2822391/1‑93 (MQ=255)

                 tgtgCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGa                                                                       <  2:5187302/93‑1 (MQ=255)

                 tgtgCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGa                                                                       >  1:1415255/1‑93 (MQ=255)

                  gtgCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCggga                                                                      >  1:1779973/1‑91 (MQ=255)

                  gtgCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGaa                                                                      <  1:5898558/93‑1 (MQ=255)

                  gtgCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGaa                                                                      >  2:3588244/1‑93 (MQ=255)

                   tgCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAg                                                                     <  1:4880050/93‑1 (MQ=255)

                    gCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAgg                                                                    <  2:5725958/93‑1 (MQ=255)

                     gaaaTGGCGAGTGTCCACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAggg                                                                   <  1:5552342/92‑1 (MQ=255)

                     cAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAggg                                                                   <  1:5607304/93‑1 (MQ=255)

                     cAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAggg                                                                   >  1:2016434/1‑93 (MQ=255)

                       aaTGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAggggg                                                                 >  2:2142644/1‑92 (MQ=255)

                       aaTGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAgggga                                                                 >  1:4687563/1‑92 (MQ=255)

                        aTGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTa                                                                <  1:5480905/93‑1 (MQ=255)

                        aTGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTa                                                                <  1:6634916/93‑1 (MQ=255)

                        aTGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTa                                                                <  2:4093726/93‑1 (MQ=255)

                        aTGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTa                                                                <  2:4187719/93‑1 (MQ=255)

                          ggCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGa                                                              <  2:3610189/93‑1 (MQ=255)

                          ggCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGa                                                              >  2:2483510/1‑93 (MQ=255)

                          ggCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGa                                                              <  2:2628668/93‑1 (MQ=255)

                            cGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGaaa                                                            <  1:1460271/93‑1 (MQ=255)

                             gAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGGAGAAAc                                                           >  1:3785768/1‑93 (MQ=255)

                               gtgtCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAAccc                                                         <  1:4258184/93‑1 (MQ=255)

                                tgtCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCa                                                        <  2:3061674/93‑1 (MQ=255)

                                  tCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAgg                                                      >  1:3389766/1‑93 (MQ=255)

                                    gacgaAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAg                                                    >  1:691464/1‑93 (MQ=255)

                                     acgaAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCCTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGc                                                   <  1:3091760/93‑1 (MQ=255)

                                      cgaAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCa                                                  <  2:6024800/93‑1 (MQ=255)

                                       gaAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAg                                                 <  1:214067/93‑1 (MQ=255)

                                        aaaTCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAgg                                                <  1:5062239/93‑1 (MQ=255)

                                         aaTCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGc                                               >  1:1912944/1‑93 (MQ=255)

                                           tctcCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCTGAAGGGGTAGAAACCCAGGAGCAGGCgg                                             >  1:2718926/1‑93 (MQ=255)

                                            ctcCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGa                                            <  2:3574654/93‑1 (MQ=255)

                                              ccGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGAtt                                          <  1:115818/93‑1 (MQ=255)

                                               cGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGAttt                                         >  1:838828/1‑93 (MQ=255)

                                                  tCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAAt                                      <  2:1223680/93‑1 (MQ=255)

                                                  tCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAAt                                      <  1:568582/93‑1 (MQ=255)

                                                    atatTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGa                                    >  1:4071780/1‑93 (MQ=255)

                                                    atatTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGa                                    <  1:4138521/93‑1 (MQ=255)

                                                    atatTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGa                                    >  1:2705432/1‑93 (MQ=255)

                                                     tatTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGAt                                   >  2:3702374/1‑93 (MQ=255)

                                                     tatTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGAt                                   >  2:1862990/1‑93 (MQ=255)

                                                     tatTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGAt                                   <  1:4544175/93‑1 (MQ=255)

                                                     tatTGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGAt                                   >  1:3256399/1‑93 (MQ=255)

                                                       ttGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCg                                 >  1:369039/1‑93 (MQ=255)

                                                       ttGTGGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCg                                 <  2:2950057/93‑1 (MQ=255)

                                                         gtgGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGt                               <  1:2315603/93‑1 (MQ=255)

                                                         gtgGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGt                               <  2:6139346/93‑1 (MQ=255)

                                                          tgGACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTa                              >  1:3321554/1‑93 (MQ=255)

                                                           ggACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTaa                             <  2:5499420/93‑1 (MQ=255)

                                                            gACAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTaaa                            <  2:3903671/93‑1 (MQ=255)

                                                             aCAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAg                           <  1:988273/93‑1 (MQ=255)

                                                             aCAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAg                           >  2:4999317/1‑93 (MQ=255)

                                                              cAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAgg                          >  1:6105494/1‑93 (MQ=255)

                                                              cAATATTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAgg                          >  2:6360616/1‑93 (MQ=255)

                                                                 tatTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGt                       >  1:5154055/1‑93 (MQ=255)

                                                                 tatTGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGt                       <  1:1259341/93‑1 (MQ=255)

                                                                   ttGTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTc                     <  2:1733098/93‑1 (MQ=255)

                                                                     gTCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGGTCAc                   >  1:5729964/1‑93 (MQ=255)

                                                                      tCGAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACt                  <  2:4911058/93‑1 (MQ=255)

                                                                        gAACTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACttt                <  1:3902201/93‑1 (MQ=255)

                                                                         aaCTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACtttt               >  1:2069055/1‑93 (MQ=255)

                                                                         aaCTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACtttt               >  2:4044833/1‑93 (MQ=255)

                                                                         aaCTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACtttt               <  2:445231/93‑1 (MQ=255)

                                                                         aaCTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACtttt               <  1:534241/93‑1 (MQ=255)

                                                                         aaCTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACtttt               <  2:2293509/93‑1 (MQ=255)

                                                                          aCTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACttttt              <  2:4736233/93‑1 (MQ=255)

                                                                          aCTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACttttt              <  1:6533619/93‑1 (MQ=255)

                                                                          aCTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACttttt              >  1:2918955/1‑93 (MQ=255)

                                                                          aCTAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACttttt              >  1:6351559/1‑93 (MQ=255)

                                                                            tAGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGc            >  1:1616044/1‑93 (MQ=255)

                                                                             aGCGCGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCa           >  1:763433/1‑93 (MQ=255)

                                                                              gcgcGTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAg          >  2:6688444/1‑93 (MQ=255)

                                                                               cgcgTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAgg         <  2:5466924/93‑1 (MQ=255)

                                                                                 cgTAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGc       <  1:3652219/93‑1 (MQ=255)

                                                                                   tAAGCCCTGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGCTa     <  1:644444/93‑1 (MQ=255)

                                                                                   tAAGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGCTa     >  2:165790/1‑93 (MQ=255)

                                                                                    aaGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGCTAt    <  2:3951764/93‑1 (MQ=255)

                                                                                     aGCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGCTAtt   <  1:5787450/93‑1 (MQ=255)

                                                                                      gCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGCTAttt  <  2:3188566/93‑1 (MQ=255)

                                                                                      gCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGCTAttt  <  1:4520348/93‑1 (MQ=255)

                                                                                      gCCCGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGCTAttt  >  2:4820407/1‑93 (MQ=255)

AAGATCGATAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCTGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGCTATTT  >  NC_000913/332441‑332619

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`