BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,864,481	T→C	V453A (GTA→GCA)	b2740 →	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,864,481	0	T	C	100.0%	874.0 / NA	267	V453A (GTA→GCA)	b2740	putative transport protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (129/138); total (129/138)

Only 100 of 274 total aligned reads displayed.

TGTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGA  >  NC_000913/2864391‑2864570

tGTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCaa                                                                                         <  2:3259701/93‑1 (MQ=255)

tGTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCaa                                                                                         <  1:2136796/93‑1 (MQ=255)

tGTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCaa                                                                                         >  1:4528856/1‑93 (MQ=255)

 gTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAAt                                                                                        >  1:111703/1‑93 (MQ=255)

 gTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTAACGGATTCTTAATTACCTGGTGCGTATGGGCGGCAAt                                                                                        >  1:1238317/1‑93 (MQ=255)

   cGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAAttt                                                                                      <  2:5610522/93‑1 (MQ=255)

      tAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGAc                                                                                   >  2:1394618/1‑93 (MQ=255)

       aGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGAcc                                                                                  <  2:5695556/93‑1 (MQ=255)

       aGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGAcc                                                                                  >  2:2593137/1‑93 (MQ=255)

       aGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGAcc                                                                                  <  1:1001303/93‑1 (MQ=255)

       aGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTAACTGGTGCGTATGGGCGGCAATTTGAcc                                                                                  >  1:3671578/1‑93 (MQ=255)

        gCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCt                                                                                 >  1:629483/1‑93 (MQ=255)

        gCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCt                                                                                 <  2:5136243/93‑1 (MQ=255)

          aGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTta                                                                               <  2:4261447/93‑1 (MQ=255)

           gACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTtaa                                                                              <  2:3204424/93‑1 (MQ=255)

           gACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTtaa                                                                              >  2:4804256/1‑93 (MQ=255)

           gACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTtaa                                                                              >  1:1700066/1‑93 (MQ=255)

             cGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTtaata                                                                            <  2:5043284/93‑1 (MQ=255)

              ggTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTtaataa                                                                           >  2:2551499/1‑93 (MQ=255)

                  tGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAg                                                                       <  1:4991676/93‑1 (MQ=255)

                  tGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAg                                                                       >  1:5496593/1‑93 (MQ=255)

                  tGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAg                                                                       <  1:3311401/93‑1 (MQ=255)

                  tGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAg                                                                       <  2:4940190/93‑1 (MQ=255)

                   gAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAgg                                                                      <  2:4194233/93‑1 (MQ=255)

                   gAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAgg                                                                      <  1:6219680/93‑1 (MQ=255)

                   gAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAgg                                                                      >  2:804587/1‑93 (MQ=255)

                    aaaaCCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGt                                                                     <  2:6005091/93‑1 (MQ=255)

                     aaaCCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTc                                                                    <  1:229936/93‑1 (MQ=255)

                     aaaCCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTc                                                                    >  1:665776/1‑93 (MQ=255)

                     aaaCCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTc                                                                    >  1:5797517/1‑93 (MQ=255)

                      aaCCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTcc                                                                   >  2:5247322/1‑93 (MQ=255)

                       aCCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTACTAAAAAGGTCCg                                                                  <  2:3590327/93‑1 (MQ=255)

                       aCCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCg                                                                  <  2:1169896/93‑1 (MQ=255)

                       aCCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCg                                                                  >  2:1959428/1‑93 (MQ=255)

                       aCCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCg                                                                  <  1:2839017/93‑1 (MQ=255)

                        ccTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGa                                                                 <  1:1502498/93‑1 (MQ=255)

                         cTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGAt                                                                >  2:2062009/1‑93 (MQ=255)

                         cTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGAt                                                                <  1:881536/93‑1 (MQ=255)

                          tGGACAGTGTTAACGCTCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGTCCTTAATAAAAAGGTCCGATg                                                               <  1:6484527/93‑1 (MQ=255)

                          tGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATg                                                               <  2:6237100/93‑1 (MQ=255)

                            gACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATggg                                                             <  2:3422630/93‑1 (MQ=255)

                               aGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCAt                                                          >  2:6625629/1‑93 (MQ=255)

                                 tgtTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCg                                                        <  1:3165512/93‑1 (MQ=255)

                                  gtTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCgg                                                       >  1:5992466/1‑93 (MQ=255)

                                   ttAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGa                                                      >  1:3518361/1‑93 (MQ=255)

                                    tAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGAc                                                     <  2:4044712/93‑1 (MQ=255)

                                    tAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGAc                                                     <  1:5836413/93‑1 (MQ=255)

                                      aCGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCt                                                   >  2:1673158/1‑93 (MQ=255)

                                      aCGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCt                                                   >  1:4079222/1‑93 (MQ=255)

                                      aCGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCt                                                   <  2:2217396/93‑1 (MQ=255)

                                      aCGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCt                                                   <  1:5756661/93‑1 (MQ=255)

                                       cGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCtt                                                  >  1:3858102/1‑93 (MQ=255)

                                         aCCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCtttt                                                <  2:4304031/93‑1 (MQ=255)

                                         aCCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCtttt                                                <  1:6177521/93‑1 (MQ=255)

                                          ccATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTa                                               >  2:3604790/1‑93 (MQ=255)

                                           cATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTAt                                              >  2:6651910/1‑93 (MQ=255)

                                             ttCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAACAAGGTCCGATGGGCATCGGACCTTTTATtg                                            >  2:4105348/1‑93 (MQ=255)

                                             ttCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATtg                                            >  1:975743/1‑93 (MQ=255)

                                             ttCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATtg                                            >  1:2922588/1‑93 (MQ=255)

                                              tctcGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATtgt                                           >  2:6188721/1‑93 (MQ=255)

                                                tcGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGc                                         >  2:2814025/1‑93 (MQ=255)

                                                    ttttACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAg                                     >  2:4493651/1‑93 (MQ=255)

                                                     tttACCGGATTCTTAATTACCTGGTGCGTATGGGCGGGAATTTGACCTTAATAAAAATGTTCGATAGGCAGCGGACCTTTTATTGTGCACAGa                                    >  2:6354907/1‑93 (MQ=255)

                                                       tACCGGATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGaaa                                  >  2:4530879/1‑93 (MQ=255)

                                                           ggATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGc                              <  2:2127288/93‑1 (MQ=255)

                                                            gATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGcc                             <  2:277573/93‑1 (MQ=255)

                                                            gATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGcc                             >  2:2874168/1‑93 (MQ=255)

                                                            gATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGcc                             <  2:5886280/93‑1 (MQ=255)

                                                            gATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGcc                             >  2:5914435/1‑93 (MQ=255)

                                                            gATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGcc                             >  2:1455724/1‑93 (MQ=255)

                                                            gATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGcc                             >  1:4647652/1‑93 (MQ=255)

                                                            gATTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGcc                             <  1:5414768/93‑1 (MQ=255)

                                                             aTTCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCa                            >  2:5274347/1‑93 (MQ=255)

                                                              ttCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAg                           >  2:3837859/1‑93 (MQ=255)

                                                              ttCTTAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAg                           >  2:2336542/1‑93 (MQ=255)

                                                                 ttAATTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCt                        >  2:3712658/1‑93 (MQ=255)

                                                                    aTTACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGc                     <  1:4344766/93‑1 (MQ=255)

                                                                     ttACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCt                    <  1:6589637/93‑1 (MQ=255)

                                                                     ttACCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCt                    <  1:2418600/93‑1 (MQ=255)

                                                                       aCCTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTg                  >  1:6359590/1‑93 (MQ=255)

                                                                         cTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTgag                <  1:4808290/93‑1 (MQ=255)

                                                                         cTGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTgag                <  1:5892780/93‑1 (MQ=255)

                                                                          tGGTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTgaga               <  2:6670260/93‑1 (MQ=255)

                                                                           ggTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGAc              <  2:6070532/93‑1 (MQ=255)

                                                                           ggTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGAc              <  1:1056746/93‑1 (MQ=255)

                                                                           ggTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGAc              <  1:3837103/93‑1 (MQ=255)

                                                                            gTGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACt             <  1:6265640/93‑1 (MQ=255)

                                                                             tGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTg            <  1:156875/93‑1 (MQ=255)

                                                                             tGCGTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTg            <  1:4278996/93‑1 (MQ=255)

                                                                                gTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGcc         <  1:1857250/93‑1 (MQ=255)

                                                                                gTATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGcc         >  1:5191496/1‑93 (MQ=255)

                                                                                 tATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCt        >  1:1272917/1‑93 (MQ=255)

                                                                                 tATGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCt        >  1:5924797/1‑93 (MQ=255)

                                                                                  aTGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCtt       <  1:3048078/93‑1 (MQ=255)

                                                                                  aTGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCtt       >  1:3683758/1‑93 (MQ=255)

                                                                                  aTGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCtt       <  2:3008160/93‑1 (MQ=255)

                                                                                   tGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCttt      >  1:2068583/1‑93 (MQ=255)

                                                                                   tGGGCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCttt      >  2:2005411/1‑93 (MQ=255)

                                                                                     ggcggcAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCt    >  1:513157/1‑93 (MQ=255)

                                                                                      gCGGCAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTg   <  2:6612030/93‑1 (MQ=255)

TGTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGACCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGA  >  NC_000913/2864391‑2864570

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`