BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	339,498	T→C	V37A (GTG→GCG)	yahI →	putative kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	339,498	0	T	C	100.0%	827.0 / NA	256	V37A (GTG→GCG)	yahI	putative kinase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (130/126); total (130/126)

Only 100 of 266 total aligned reads displayed.

TTGCCATTGGTGGCAACAGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGTGCTGGAAATGCTGGCTTCCGATTACGACATTGTGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATT  >  NC_000913/339408‑339586

ttGCCATTGGTGGCAACATCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGgcgc                                                                                        <  1:993776/93‑1 (MQ=255)

ttGCCATTGGTGGCAACAGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGgcgc                                                                                        >  1:3809319/1‑93 (MQ=255)

ttGCCATTGGTGGCAACAGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGgcgc                                                                                        >  2:3659696/1‑93 (MQ=255)

    cATTGGTGGCAACAGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGTATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGa                                                                                    >  2:3811219/1‑93 (MQ=255)

    cATTGGTGGCAACAGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGa                                                                                    >  2:5589849/1‑93 (MQ=255)

     aTTGGTGGCAACAGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGaa                                                                                   >  2:2994409/1‑93 (MQ=255)

     aTTGGTGGCAACAGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGaa                                                                                   >  2:2382119/1‑93 (MQ=255)

     aTTGGTGGCAACAGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGaa                                                                                   >  2:4474114/1‑93 (MQ=255)

      ttGGTGGCAACAGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGaaa                                                                                  >  1:1118718/1‑93 (MQ=255)

      ttGGTGGCAACAGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAACCCGTCGCCGATACGGCGCTGGaaa                                                                                  <  1:1752616/93‑1 (MQ=255)

       tggtggCAACAGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAAt                                                                                 <  2:4634772/93‑1 (MQ=255)

       tggtggCAACAGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAAt                                                                                 <  1:6521443/93‑1 (MQ=255)

          gggaaaCAGCATTATAAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCt                                                                              <  2:3540070/89‑1 (MQ=255)

             cAACAGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGc                                                                           <  1:4496746/93‑1 (MQ=255)

               aCAGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCtt                                                                         >  1:4803548/1‑93 (MQ=255)

               aCAGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCtt                                                                         >  1:3340934/1‑93 (MQ=255)

                cAGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTc                                                                        >  2:2716725/1‑93 (MQ=255)

                aaggaTTATCAAAAATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTc                                                                        <  1:3927810/89‑1 (MQ=255)

                 aGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTcc                                                                       <  1:1565343/93‑1 (MQ=255)

                  gCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCg                                                                      >  1:124889/1‑93 (MQ=255)

                  gCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCg                                                                      >  1:5945258/1‑93 (MQ=255)

                   cATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGa                                                                     >  1:4343577/1‑93 (MQ=255)

                    aTTATCAAAGATAGCGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGAt                                                                    <  1:823758/93‑1 (MQ=255)

                    aTTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGAt                                                                    >  1:2920843/1‑93 (MQ=255)

                    aTTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGAt                                                                    >  2:3268542/1‑93 (MQ=255)

                    aTTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGAt                                                                    >  1:3629766/1‑93 (MQ=255)

                    aTTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGAt                                                                    >  1:1063233/1‑93 (MQ=255)

                     ttATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGAtt                                                                   >  1:5686091/1‑93 (MQ=255)

                     ttATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGAtt                                                                   >  1:5414976/1‑93 (MQ=255)

                     ttATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGAtt                                                                   >  2:4537779/1‑93 (MQ=255)

                     ttATAAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGAtt                                                                   <  1:5811171/93‑1 (MQ=255)

                      tATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTa                                                                  >  2:4296771/1‑93 (MQ=255)

                       aTCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATTCTGGCTTCCGATTAc                                                                 <  1:2952363/93‑1 (MQ=255)

                        tCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACg                                                                >  2:4737739/1‑93 (MQ=255)

                        tCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACg                                                                >  2:6635150/1‑93 (MQ=255)

                        tCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACg                                                                >  1:2438902/1‑93 (MQ=255)

                          aaaGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGAc                                                              <  1:3974604/93‑1 (MQ=255)

                          aaaGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGAc                                                              >  1:38651/1‑93 (MQ=255)

                          aaaGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGAc                                                              >  2:5777910/1‑93 (MQ=255)

                          aaaGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGCAAATGCTGGCTTCCGATTACGAc                                                              >  2:3378820/1‑93 (MQ=255)

                           aaGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACa                                                             <  1:5604749/93‑1 (MQ=255)

                           aaGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACa                                                             >  2:6046246/1‑93 (MQ=255)

                           aaGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACa                                                             <  1:79930/93‑1 (MQ=255)

                             gATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACAtt                                                           <  1:197969/93‑1 (MQ=255)

                              aTAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATtg                                                          <  2:1979796/93‑1 (MQ=255)

                               tAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATtgc                                                         <  1:1879721/93‑2 (MQ=255)

                                aaCGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATtgcg                                                        <  1:973126/93‑3 (MQ=255)

                                  cGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCt                                                      >  2:170486/1‑93 (MQ=255)

                                   gccagccaGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTg                                                     >  1:28563/1‑93 (MQ=255)

                                     cagccagTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGAc                                                   <  1:6727171/93‑1 (MQ=255)

                                     cagccagTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGAc                                                   >  2:5892138/1‑93 (MQ=255)

                                      agccagTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGAcc                                                  <  2:6459570/93‑1 (MQ=255)

                                          agTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACg                                              >  1:19373/1‑93 (MQ=255)

                                          agTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACg                                              >  1:3299374/1‑93 (MQ=255)

                                          agTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACg                                              >  1:407134/1‑93 (MQ=255)

                                             cGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCa                                           <  2:2108587/93‑1 (MQ=255)

                                              gATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCaa                                          >  2:3088551/1‑93 (MQ=255)

                                               aTTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAAc                                         <  2:5251971/93‑1 (MQ=255)

                                                ttGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACg                                        <  1:3071448/93‑1 (MQ=255)

                                                 tGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACgg                                       >  2:4977632/1‑93 (MQ=255)

                                                  gAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACggg                                      <  1:5224269/93‑1 (MQ=255)

                                                   aGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGCGATTGCGCTGACCCACGGCAACGGGc                                     >  1:4866911/1‑93 (MQ=255)

                                                   aGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGc                                     >  2:4569937/1‑93 (MQ=255)

                                                      aTCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGc                                  >  1:1991908/1‑93 (MQ=255)

                                                        cAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAg                                <  2:6692353/93‑1 (MQ=255)

                                                         aggcggaggcggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAgg                               <  2:4096000/93‑1 (MQ=255)

                                                         aggcggaggcggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAgg                               <  1:959091/93‑1 (MQ=255)

                                                         aggcggaggcggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAgg                               >  2:1252490/1‑93 (MQ=255)

                                                          ggcggaggcggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGt                              >  2:800251/1‑93 (MQ=255)

                                                          ggcggaggcggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGt                              >  1:6125731/1‑93 (MQ=255)

                                                            cggaggcggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCg                            <  1:6366201/93‑1 (MQ=255)

                                                             ggaggcggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCgg                           <  1:254524/93‑1 (MQ=255)

                                                              gaggcggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGGAGGTgggg                          >  1:1506602/1‑93 (MQ=255)

                                                              gaggcggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGAAACGGGCCGCAGGTCggg                          >  2:222615/1‑93 (MQ=255)

                                                                ggcggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCt                        <  2:6289461/93‑1 (MQ=255)

                                                                   ggTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGa                     >  2:96487/1‑93 (MQ=255)

                                                                    gTGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGAt                    <  2:3887316/93‑1 (MQ=255)

                                                                     tGAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGAtt                   <  2:5486547/93‑1 (MQ=255)

                                                                      gAAAGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGAttt                  <  2:2300824/93‑1 (MQ=255)

                                                                       aaaGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTa                 >  2:5159988/1‑93 (MQ=255)

                                                                       aaaGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTa                 >  2:2877989/1‑93 (MQ=255)

                                                                         aGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACg               >  2:6525374/1‑93 (MQ=255)

                                                                         aGCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACg               >  2:1106066/1‑93 (MQ=255)

                                                                          gCCGTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGc              >  1:4736346/1‑93 (MQ=255)

                                                                            cGTCGCCGATACGGCGCTGGAAATGCTGGCTTCAGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCg            <  1:1898079/93‑1 (MQ=255)

                                                                             gTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGt           >  1:1309720/1‑93 (MQ=255)

                                                                             gTCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGt           <  2:252229/93‑1 (MQ=255)

                                                                              tCGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTg          <  1:222316/93‑1 (MQ=255)

                                                                               cGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGc         >  2:1525974/1‑93 (MQ=255)

                                                                               cGCCGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGc         <  2:3767292/93‑1 (MQ=255)

                                                                                 ccGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCgg       >  1:3649785/1‑93 (MQ=255)

                                                                                  cGATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGga      <  2:4766367/93‑1 (MQ=255)

                                                                                   gATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGgag     <  2:4309443/93‑1 (MQ=255)

                                                                                   gATACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGgag     >  2:3581572/1‑93 (MQ=255)

                                                                                    aTACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGgaga    <  2:5049253/93‑1 (MQ=255)

                                                                                    aTACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCCgaga    >  1:1570180/1‑93 (MQ=255)

                                                                                     tgcGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGAt   >  1:6618023/3‑93 (MQ=255)

                                                                                     tACGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGAt   <  1:3113219/93‑1 (MQ=255)

                                                                                      aCGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGAtt  <  1:4162063/93‑1 (MQ=255)

                                                                                      aCGGCGCTGGAAATGCTGGCTTCCGATTACGACATTGCGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGAtt  >  1:916292/1‑93 (MQ=255)

TTGCCATTGGTGGCAACAGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGTGCTGGAAATGCTGGCTTCCGATTACGACATTGTGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATT  >  NC_000913/339408‑339586

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`