BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,933,024	T→C	R256R (CGT→CGC)	fucP →	fucose permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,933,024	0	T	C	99.6%	859.0 / NA	262	R256R (CGT→CGC)	fucP	fucose permease
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (131/130); total (132/130)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 276 total aligned reads displayed.

CATGCTGACGAAATTCCCGGCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGTATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTGATTCGCTACGCTGT  >  NC_000913/2932934‑2933113

  tGCTGACGAAATTCCCGGCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTc                                                                                       <  2:5730578/93‑1 (MQ=255)

    cTGACGAAATTCCCGGCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGc                                                                                     >  2:4457156/1‑93 (MQ=255)

        cGAAATTCCCGGCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACt                                                                                 >  1:3639178/1‑93 (MQ=255)

         gAAATTCCCGGCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTg                                                                                <  1:1119121/93‑1 (MQ=255)

         gAAATTCCCGGCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTg                                                                                <  1:1511507/93‑1 (MQ=255)

          aaaTTCCCGGCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTgg                                                                               >  2:3586898/1‑93 (MQ=255)

           aaTTCCCGGCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGgc                                                                              <  2:4272280/93‑1 (MQ=255)

           aaTTCCCGGCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGgc                                                                              >  2:4115568/1‑93 (MQ=255)

           aaTTCCCGGCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGgc                                                                              <  1:1773994/93‑1 (MQ=255)

             ttCCCGGCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGgcgc                                                                            <  2:1347517/93‑1 (MQ=255)

             ttCCCGGCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGgcgc                                                                            >  2:4348542/1‑93 (MQ=255)

              tCCCGGCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCt                                                                           <  2:6141025/93‑1 (MQ=255)

               cccGGCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTg                                                                          <  2:2506430/93‑1 (MQ=255)

               cccGGCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTg                                                                          >  2:2901709/1‑93 (MQ=255)

                ccGGCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTgg                                                                         <  2:4053654/93‑1 (MQ=255)

                ccGGCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTgg                                                                         <  1:2700860/93‑1 (MQ=255)

                  ggCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGc                                                                       <  2:353596/93‑1 (MQ=255)

                  ggCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGc                                                                       <  1:6029348/93‑1 (MQ=255)

                    cATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCgg                                                                     >  2:1755488/1‑93 (MQ=255)

                      ttGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTa                                                                   >  2:3019665/1‑93 (MQ=255)

                      ttGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTa                                                                   >  2:3248986/1‑93 (MQ=255)

                         cAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTa                                                                >  2:3112752/1‑93 (MQ=255)

                         cAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTa                                                                <  1:6369514/93‑1 (MQ=255)

                         cAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTa                                                                <  2:5185275/93‑1 (MQ=255)

                           gagTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAgc                                                              >  2:544257/1‑93 (MQ=255)

                           gagTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAgc                                                              >  1:5810086/1‑93 (MQ=255)

                           gagTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAgc                                                              >  1:566001/1‑93 (MQ=255)

                               gATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCaa                                                          >  1:887932/1‑93 (MQ=255)

                                aTAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAAt                                                         >  2:6391104/1‑93 (MQ=255)

                                  aaTCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTc                                                       <  1:1232110/93‑1 (MQ=255)

                                  aaTCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTc                                                       >  1:4927712/1‑93 (MQ=255)

                                  aaTCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTc                                                       <  1:3867997/93‑1 (MQ=255)

                                  aaTCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTc                                                       <  1:1038304/93‑1 (MQ=255)

                                   aTCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCt                                                      >  2:2419697/1‑93 (MQ=255)

                                   aTCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCt                                                      >  1:3535966/1‑93 (MQ=255)

                                   aTCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCt                                                      >  2:6076152/1‑93 (MQ=255)

                                    tCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGTATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTg                                                     >  2:5934273/1‑93 (MQ=255)

                                    tCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTg                                                     <  2:6558246/93‑1 (MQ=255)

                                    tCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTg                                                     >  1:4560280/1‑93 (MQ=255)

                                      acaGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCt                                                   >  1:6283347/1‑93 (MQ=255)

                                       caGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTa                                                  >  2:3426135/1‑93 (MQ=255)

                                       caGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATCCTGCTa                                                  <  1:5557248/93‑1 (MQ=255)

                                        aGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTAt                                                 <  2:4502745/93‑1 (MQ=255)

                                        aGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTAt                                                 <  1:4782368/93‑1 (MQ=255)

                                         gTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATg                                                >  1:1905037/1‑93 (MQ=255)

                                          tGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGt                                               <  2:4646544/93‑1 (MQ=255)

                                           gACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTc                                              >  2:1201903/1‑93 (MQ=255)

                                             cGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCgg                                            >  2:5511486/1‑93 (MQ=255)

                                                 aaaCAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGca                                        >  2:3798073/1‑93 (MQ=255)

                                                  aaCAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGcac                                       <  1:2815069/93‑1 (MQ=255)

                                                  aaCAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGCATTAGCGCAATTCTGCTATGTCGGGGcac                                       >  1:6230780/1‑93 (MQ=255)

                                                   aCAAGGATCGTTCTCCGCATCGTTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGcaca                                      <  1:5213774/93‑1 (MQ=255)

                                                     aaGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACaaa                                    <  2:6276340/93‑1 (MQ=255)

                                                     aaGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACaaa                                    <  2:2616734/93‑1 (MQ=255)

                                                      aGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAAc                                   <  1:1207016/93‑1 (MQ=255)

                                                      aGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAAc                                   <  2:3754713/93‑1 (MQ=255)

                                                          tCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGcc                               <  2:3640594/93‑1 (MQ=255)

                                                          tCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGcc                               <  1:976612/93‑1 (MQ=255)

                                                          tCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGcc                               <  2:1949248/93‑1 (MQ=255)

                                                            gTTCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCctg                             <  1:3275631/93‑1 (MQ=255)

                                                             ttCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCctgc                            >  2:6023557/1‑93 (MQ=255)

                                                             ttCTCCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCctgc                            <  1:6074125/93‑1 (MQ=255)

                                                               ctcCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCctgctg                          <  1:4988610/93‑1 (MQ=255)

                                                               ctcCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCctgctg                          <  1:2376931/93‑1 (MQ=255)

                                                                tcCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTgg                         <  2:3289856/93‑1 (MQ=255)

                                                                tcCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTgg                         >  1:5289781/1‑93 (MQ=255)

                                                                tcCGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTgg                         >  1:1625266/1‑93 (MQ=255)

                                                                 ccGCATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGa                        <  1:1526182/93‑1 (MQ=255)

                                                                   gCATCTCTTTCTCGCCTGGCGCGTATTCGTCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGc                      <  2:2161217/93‑1 (MQ=255)

                                                                    cATCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCt                     >  2:2678109/1‑93 (MQ=255)

                                                                     aTCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTa                    >  2:6218553/1‑93 (MQ=255)

                                                                     aTCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTa                    >  1:2456725/1‑93 (MQ=255)

                                                                     aTCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTa                    >  1:806076/1‑93 (MQ=255)

                                                                      tCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTAt                   >  2:3188513/1‑93 (MQ=255)

                                                                      tCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTAt                   >  2:1430939/1‑93 (MQ=255)

                                                                      tCGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTAt                   <  1:6225481/93‑1 (MQ=255)

                                                                       cGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTAtt                  <  1:6468758/93‑1 (MQ=255)

                                                                       cGCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTAtt                  <  1:420435/93‑1 (MQ=255)

                                                                        gCTTTCTCTCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTAttt                 >  1:6563163/1‑93 (MQ=255)

                                                                        gCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTAttt                 <  2:66134/93‑1 (MQ=255)

                                                                        gCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTAttt                 >  1:2228538/1‑93 (MQ=255)

                                                                        gCTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTAttt                 >  2:4778896/1‑93 (MQ=255)

                                                                         cTTTCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTg                >  2:2296805/1‑93 (MQ=255)

                                                                          tttCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTGa               >  1:3078917/1‑93 (MQ=255)

                                                                          tttCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTGa               >  1:1983792/1‑93 (MQ=255)

                                                                          tttCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGATATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTGa               <  2:694377/93‑1 (MQ=255)

                                                                           ttCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTGAt              <  2:184605/93‑1 (MQ=255)

                                                                           ttCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTGAt              <  2:1898213/93‑1 (MQ=255)

                                                                           ttCTCGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTGAt              >  1:4139977/1‑93 (MQ=255)

                                                                            tctcGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTGAtt             <  2:169919/93‑1 (MQ=255)

                                                                              tcGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTGATTCg           <  2:3919549/93‑1 (MQ=255)

                                                                               cGCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTGATTCGc          >  1:5083589/1‑93 (MQ=255)

                                                                                gCCTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTGATTCGCt         >  1:704070/1‑93 (MQ=255)

                                                                                 ccTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTGATTCGCTa        <  1:2536125/93‑1 (MQ=255)

                                                                                  cTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTGATTCGCTAc       <  2:827565/93‑1 (MQ=255)

                                                                                  cTGGCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTGATTCGCTAc       <  1:5270499/93‑1 (MQ=255)

                                                                                    ggCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTGATTCGCTACGc     <  2:5045338/93‑1 (MQ=255)

                                                                                    ggCGCGCATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTGATTCGCTACGc     >  2:1684459/1‑93 (MQ=255)

                                                                                     gcgcgcATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTGATTCGCTACGCt    <  2:4820031/93‑1 (MQ=255)

                                                                                       gcgcATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTGATTCGCTACGCTGt  <  1:1303143/93‑1 (MQ=255)

CATGCTGACGAAATTCCCGGCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGTATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTGATTCGCTACGCTGT  >  NC_000913/2932934‑2933113

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`