BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,979,391	T→C	T272A (ACC→GCC)	araE ←	low‑affinity L‑arabinose transport system proton symport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,979,391	0	T	C	100.0%	789.9 / NA	240	T272A (ACC→GCC)	araE	low‑affinity L‑arabinose transport system proton symport protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (124/116); total (124/116)

Only 100 of 241 total aligned reads displayed.

CCAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGTT  >  NC_000913/2979301‑2979480

ccAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCaa                                                                                         >  1:5165489/1‑93 (MQ=255)

 cAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCaaa                                                                                        <  2:5585150/93‑1 (MQ=255)

   gagTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAAct                                                                                      <  2:5685905/93‑1 (MQ=255)

    agTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAActg                                                                                     <  2:1100905/93‑1 (MQ=255)

     gTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAActgc                                                                                    >  2:1245041/1‑93 (MQ=255)

     gTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAActgc                                                                                    >  1:2076984/1‑93 (MQ=255)

       cGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAActgctg                                                                                  >  2:5763175/1‑93 (MQ=255)

         cAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCTGCAAACTGCTGCa                                                                                >  2:5392853/1‑93 (MQ=255)

          aaTCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCAt                                                                               >  2:4181098/1‑93 (MQ=255)

          aaTCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCAt                                                                               >  1:2383873/1‑93 (MQ=255)

          aaTCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCAt                                                                               >  2:1980490/1‑93 (MQ=255)

           atcatcTGTTGTCCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATc                                                                              <  1:1682884/93‑1 (MQ=255)

           atcatcTGATGTTCTGTGGCCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATc                                                                              >  1:6561120/1‑93 (MQ=255)

            tcatcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCg                                                                             >  2:4434841/1‑93 (MQ=255)

            tcatcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCg                                                                             >  2:4020757/1‑93 (MQ=255)

            tcatcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCg                                                                             >  1:651071/1‑93 (MQ=255)

              atcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGcc                                                                           <  2:4565828/93‑1 (MQ=255)

               tcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCt                                                                          >  2:2297536/1‑93 (MQ=255)

               tcTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCt                                                                          <  2:6703934/93‑1 (MQ=255)

                  gttgttCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGca                                                                       >  2:2046357/1‑93 (MQ=255)

                  gttgttCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGca                                                                       >  1:458205/1‑93 (MQ=255)

                    tgttCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGcaac                                                                     >  1:2759428/1‑93 (MQ=255)

                       tCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCaacaac                                                                  >  2:5018584/1‑93 (MQ=255)

                        cTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAacaaca                                                                 <  2:2954027/93‑1 (MQ=255)

                        cTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAacaaca                                                                 <  1:5827205/93‑1 (MQ=255)

                         tgtgGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACAt                                                                >  2:5426225/1‑93 (MQ=255)

                         tgtgGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACAt                                                                <  2:2482137/93‑1 (MQ=255)

                            ggTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATAcc                                                             <  2:4040570/93‑1 (MQ=255)

                             gTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCg                                                            >  1:5426173/1‑93 (MQ=255)

                              tCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCga                                                           <  1:3440255/93‑1 (MQ=255)

                              tCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCga                                                           <  1:2772482/93‑1 (MQ=255)

                                  aaaGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGaaa                                                       >  1:21814/1‑93 (MQ=255)

                                   aaGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAac                                                      <  2:5836358/93‑1 (MQ=255)

                                    aGCCCGCCATTTTGAAGATACGCGGTGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAaca                                                     >  1:1808082/1‑93 (MQ=255)

                                     gCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAacac                                                    <  2:752576/93‑1 (MQ=255)

                                     gCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAacac                                                    <  2:5680301/93‑1 (MQ=255)

                                       ccGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAg                                                  <  2:1660072/93‑1 (MQ=255)

                                       ccGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAg                                                  >  2:6491320/1‑93 (MQ=255)

                                         gCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCa                                                <  2:5706949/93‑1 (MQ=255)

                                         gCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCa                                                >  2:1579733/1‑93 (MQ=255)

                                          ccATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCac                                               <  1:4511777/93‑1 (MQ=255)

                                          ccATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCac                                               <  1:824401/93‑1 (MQ=255)

                                          ccATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCac                                               <  1:565579/93‑1 (MQ=255)

                                          ccATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCac                                               <  2:5148862/93‑1 (MQ=255)

                                           cATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCacg                                              >  2:4164888/1‑93 (MQ=255)

                                             ttttGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCacgac                                            <  2:1835934/93‑1 (MQ=255)

                                              tttGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCacgacg                                           <  1:612699/93‑1 (MQ=255)

                                               ttGAAAATACGCGGCGCGTAGTACATGATGAGGTCCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACgacgg                                          <  1:4810329/93‑1 (MQ=255)

                                                tGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACgacgga                                         >  2:4851391/1‑93 (MQ=255)

                                                 gAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAAAACAGCACgacggac                                        >  1:4844560/1‑93 (MQ=255)

                                                  aaGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACgacggacg                                       >  1:1596518/1‑93 (MQ=255)

                                                  aaGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACgacggacg                                       >  1:1972306/1‑93 (MQ=255)

                                                   aGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGt                                      >  2:2721996/1‑93 (MQ=255)

                                                    gATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGtt                                     <  1:1276653/93‑1 (MQ=255)

                                                    gATACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGtt                                     >  1:5042272/1‑93 (MQ=255)

                                                      tACGCGGCGCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTAc                                   <  2:2603777/93‑1 (MQ=255)

                                                         gcggcgCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGt                                <  2:3214846/93‑1 (MQ=255)

                                                         gcggcgCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGt                                >  2:1425728/1‑93 (MQ=255)

                                                          cggcgCGTAGTACATGATGATGTTCATACCGGCAAGCTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGtt                               <  1:4396069/93‑1 (MQ=255)

                                                          cggcgCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAGCATACCGAGAAACACAGCACGACGGACGTTACGGtt                               <  1:4666489/93‑1 (MQ=255)

                                                          cggcgCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGtt                               >  2:5339156/1‑93 (MQ=255)

                                                           ggcgCGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTg                              >  2:2694185/1‑93 (MQ=255)

                                                            gcgcGTATTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCTTGCAACAACATCCCGAGAAACACAGCACGACGGACGTTACGGTTGa                             <  1:3836807/93‑1 (MQ=255)

                                                            gcgcGTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCGCGACGGACGTTACGGTTGa                             <  1:5461168/93‑1 (MQ=255)

                                                             cgcgTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGAt                            >  2:6361932/1‑93 (MQ=255)

                                                             cgcgTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGAt                            <  2:3411815/93‑1 (MQ=255)

                                                              gcgTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATc                           >  2:5984519/1‑93 (MQ=255)

                                                              gcgTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGCTACGGTTGATc                           >  1:3207812/1‑93 (MQ=255)

                                                               cgTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCt                          >  2:6123059/1‑93 (MQ=255)

                                                               cgTAGTACATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCt                          <  1:1389247/93‑1 (MQ=255)

                                                                gtagtaCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCtt                         >  1:2976305/1‑93 (MQ=255)

                                                                gtagtaCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCtt                         >  1:3865135/1‑93 (MQ=255)

                                                                gtagtaCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCtt                         <  2:1772740/93‑1 (MQ=255)

                                                                 tagtaCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTa                        >  2:3693445/1‑93 (MQ=255)

                                                                    taCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAAc                     >  1:6428691/1‑93 (MQ=255)

                                                                    taCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAAc                     >  1:5971948/1‑93 (MQ=255)

                                                                    taCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAAc                     >  2:3187537/1‑93 (MQ=255)

                                                                     aCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACa                    <  1:4125051/93‑1 (MQ=255)

                                                                     aCATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACa                    <  2:2534127/93‑1 (MQ=255)

                                                                      cATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAg                   >  1:4210103/1‑93 (MQ=255)

                                                                      cATGATGATGTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAg                   <  2:4296352/93‑1 (MQ=255)

                                                                       atgatgatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGt                  >  2:1804269/1‑93 (MQ=255)

                                                                       atgatgatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGt                  >  2:2441752/1‑93 (MQ=255)

                                                                        tgatgatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTg                 >  1:5511268/1‑93 (MQ=255)

                                                                          atgatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGcc               >  1:1120325/1‑93 (MQ=255)

                                                                            gatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCa             <  2:3613422/93‑1 (MQ=255)

                                                                            gatgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCa             >  2:6606697/1‑93 (MQ=255)

                                                                             atgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCaa            >  1:2992989/1‑93 (MQ=255)

                                                                              tgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCCAc           >  1:1829507/1‑93 (MQ=255)

                                                                              tgTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAAc           <  2:3206357/93‑1 (MQ=255)

                                                                               tttCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAAcc          <  1:249752/92‑1 (MQ=255)

                                                                               gTTCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAAcc          <  1:887009/93‑1 (MQ=255)

                                                                                 tCATACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGc        <  1:767871/93‑1 (MQ=255)

                                                                                   aTACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGccc      <  1:4822086/93‑1 (MQ=255)

                                                                                   aTACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGccc      <  2:3751930/93‑1 (MQ=255)

                                                                                    tACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCt     >  1:6360194/1‑93 (MQ=255)

                                                                                    tACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCt     >  1:2573544/1‑93 (MQ=255)

                                                                                    tACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCt     >  1:3717695/1‑93 (MQ=255)

                                                                                    tACCGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCt     >  2:3672914/1‑93 (MQ=255)

                                                                                       cGGCAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGtt  <  2:2897904/93‑1 (MQ=255)

CCAGAGTCGCAATCATCTGTTGTTCTGTGGTCGTAAAGCCCGCCATTTTGAAGATACGCGGCGCGTAGTACATGATGATGTTCATACCGGTAAACTGCTGCATCGCCTGCAACAACATACCGAGAAACACAGCACGACGGACGTTACGGTTGATCTTAAACAGTGCCCAACCGCCCTGTT  >  NC_000913/2979301‑2979480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`