BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,008,642	C→T	A198A (GCC→GCT)	b2873 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,008,642	0	C	T	100.0%	754.1 / NA	204	A198A (GCC→GCT)	b2873	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (100/104); total (100/104)

Only 100 of 210 total aligned reads displayed.

ATTACGCCGCTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCCGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTGGCAC  >  NC_000913/3008552‑3008730

aTTACGCCGCTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATcgctgc                                                                                        <  1:2226479/93‑1 (MQ=255)

 ttACGCCGCTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCa                                                                                       >  1:3311847/1‑93 (MQ=255)

  tACGCCGCTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAg                                                                                      <  2:4049778/93‑1 (MQ=255)

   aCGCCGCTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAgg                                                                                     <  1:5708875/93‑1 (MQ=255)

      ccgcTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGtt                                                                                  >  2:1394397/1‑93 (MQ=255)

      ccgcTTGCATGAATCAGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGtt                                                                                  <  2:6708878/93‑1 (MQ=255)

       cgcTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTa                                                                                 <  2:5000015/93‑1 (MQ=255)

        gcTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTaa                                                                                >  1:2646458/1‑93 (MQ=255)

        ccTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTaa                                                                                <  1:2864564/92‑1 (MQ=255)

         cTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAc                                                                               <  1:2135137/93‑1 (MQ=255)

         cTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAc                                                                               <  2:3751699/93‑1 (MQ=255)

          ttGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAcc                                                                              <  1:1958849/93‑1 (MQ=255)

          ttGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAcc                                                                              >  2:1863661/1‑93 (MQ=255)

           tGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAccg                                                                             >  1:6391143/1‑93 (MQ=255)

           tGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAccg                                                                             <  1:5921040/93‑1 (MQ=255)

           tGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAccg                                                                             >  2:6516729/1‑93 (MQ=255)

            gCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAccgc                                                                            <  1:300686/93‑1 (MQ=255)

               tGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAccgcgcg                                                                         >  1:3737071/1‑92 (MQ=255)

               tGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAccgcgcc                                                                         >  1:5561035/1‑93 (MQ=255)

                  aTCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAAccgcgccgcg                                                                      >  1:4322259/1‑93 (MQ=255)

                   tCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAGTTTATCGCTGCAGGGTTAACcgcgccgcgc                                                                     >  1:1544529/1‑93 (MQ=255)

                   tCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACcgcgccgcgc                                                                     <  1:6041963/93‑1 (MQ=255)

                     cGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTa                                                                   <  1:1439810/93‑1 (MQ=255)

                        cgcgcTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCa                                                                <  2:3526701/93‑1 (MQ=255)

                         gcgcTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCAt                                                               <  1:1342309/93‑1 (MQ=255)

                           gcTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGc                                                             <  2:1195530/93‑1 (MQ=255)

                             tGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCt                                                           <  1:1040314/93‑1 (MQ=255)

                              gACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCtt                                                          >  1:2413915/1‑93 (MQ=255)

                              gACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCtt                                                          >  1:27589/1‑93 (MQ=255)

                              gACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCtt                                                          <  1:5079632/93‑1 (MQ=255)

                                ccaccGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGa                                                        >  1:1834847/1‑93 (MQ=255)

                                ccaccGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGa                                                        <  2:3025410/93‑1 (MQ=255)

                                 caccGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAg                                                       <  2:3311847/93‑1 (MQ=255)

                                  cccGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGt                                                      <  2:1365060/92‑1 (MQ=255)

                                  accGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGt                                                      >  2:6092423/1‑93 (MQ=255)

                                   ccGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTc                                                     >  2:1882137/1‑93 (MQ=255)

                                     gTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGc                                                   <  1:3442242/93‑1 (MQ=255)

                                      tGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGcc                                                  >  1:3956851/1‑93 (MQ=255)

                                       gCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGccc                                                 <  1:3855970/93‑1 (MQ=255)

                                        cACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCct                                                <  1:6302804/93‑1 (MQ=255)

                                        cACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCct                                                <  1:962178/93‑1 (MQ=255)

                                        cACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCct                                                >  1:4185050/1‑93 (MQ=255)

                                          cccGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCctct                                              <  1:3925267/93‑1 (MQ=255)

                                          cccGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCctct                                              >  1:2876699/1‑93 (MQ=255)

                                          cccAGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCctct                                              <  1:561245/93‑1 (MQ=255)

                                            cGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTgg                                            >  1:4594168/1‑93 (MQ=255)

                                            cGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTgg                                            >  2:1794200/1‑93 (MQ=255)

                                            cGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTgg                                            >  1:3683158/1‑93 (MQ=255)

                                            cGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTgg                                            <  1:271879/93‑1 (MQ=255)

                                            cGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTgg                                            >  1:1701460/1‑93 (MQ=255)

                                             ggAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGa                                           >  2:4304607/1‑93 (MQ=255)

                                               aaaaTGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAAt                                         <  1:4802238/93‑1 (MQ=255)

                                               aaaaTGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAAt                                         <  2:2983313/93‑1 (MQ=255)

                                                aaaTGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATg                                        >  2:69253/1‑93 (MQ=255)

                                                 aaTGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGc                                       >  2:3899929/1‑93 (MQ=255)

                                                  atgatgCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCg                                      >  2:2026900/1‑93 (MQ=255)

                                                   tgatgCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGa                                     <  2:5563401/93‑1 (MQ=255)

                                                    gatgCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGaa                                    <  2:2562624/93‑1 (MQ=255)

                                                      tgCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGc                                  <  2:745400/93‑1 (MQ=255)

                                                       tcGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCg                                 <  2:5448855/92‑1 (MQ=255)

                                                        cGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCgg                                >  1:1709781/1‑93 (MQ=255)

                                                         ggCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGa                               >  1:1298910/1‑93 (MQ=255)

                                                         ggCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGa                               >  1:2688/1‑93 (MQ=255)

                                                         ggCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGa                               >  2:168801/1‑93 (MQ=255)

                                                         ggCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGa                               <  2:6169553/93‑1 (MQ=255)

                                                         ggCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGa                               >  2:2139875/1‑93 (MQ=255)

                                                         ggCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGa                               <  1:3648005/93‑1 (MQ=255)

                                                         ggCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGa                               <  2:2647404/93‑1 (MQ=255)

                                                          gCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGaa                              <  1:719303/93‑1 (MQ=255)

                                                          gCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGaa                              <  2:6611316/93‑1 (MQ=255)

                                                          gCTATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGaa                              <  2:4576447/93‑1 (MQ=255)

                                                            tATCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGc                            >  2:517757/1‑93 (MQ=255)

                                                             aTCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGca                           >  2:3360802/1‑92 (MQ=255)

                                                              tCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCa                          >  1:3590147/1‑93 (MQ=255)

                                                              tCGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGGTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCa                          >  1:6663101/1‑93 (MQ=255)

                                                               cGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCAt                         <  1:5870459/93‑1 (MQ=255)

                                                               cGCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCAt                         >  2:4855401/1‑93 (MQ=255)

                                                                gCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGGATGCGAAGCGGAAGCCATc                        <  1:6560661/93‑1 (MQ=255)

                                                                gCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATc                        <  1:2451610/93‑1 (MQ=255)

                                                                gCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATc                        <  1:536737/93‑1 (MQ=255)

                                                                gCCAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATc                        <  1:5755361/93‑1 (MQ=255)

                                                                 ccAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCg                       <  2:5848399/93‑1 (MQ=255)

                                                                  cAGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGc                      <  2:6395016/93‑1 (MQ=255)

                                                                   aGCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGcc                     <  2:3255759/93‑1 (MQ=255)

                                                                    gCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGccc                    >  2:1448165/1‑93 (MQ=255)

                                                                    gCAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGccc                    >  1:122900/1‑93 (MQ=255)

                                                                     cAAGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCg                   <  1:784535/93‑1 (MQ=255)

                                                                       aGCGGGCGGAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGCATGCGAACGGGAACCAATCGCCCgaa                 >  2:4603246/1‑91 (MQ=255)

                                                                         cgggcggAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATg               <  1:4501775/93‑1 (MQ=255)

                                                                          gggcggAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGCAGCGGAAGCCATCGCCCGCATGa              >  2:1535957/1‑93 (MQ=255)

                                                                           ggcggAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGAt             <  2:3977074/93‑1 (MQ=255)

                                                                              ggAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTaa          <  1:5913182/93‑1 (MQ=255)

                                                                               gAATTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAAc         >  2:5316392/1‑93 (MQ=255)

                                                                                aaTTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAAcc        <  1:5194294/93‑1 (MQ=255)

                                                                                 aTTTATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCt       >  1:2934876/1‑93 (MQ=255)

                                                                                  tttATCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTg      >  1:1903725/1‑93 (MQ=255)

                                                                                     aTCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGCAGCGGAAGCCATCGCCCGCATGATTAACCTGGca   >  2:6251541/1‑93 (MQ=255)

                                                                                      tCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTGGcac  >  2:1277537/1‑93 (MQ=255)

                                                                                      tCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTGGcac  >  2:6048409/1‑93 (MQ=255)

                                                                                      tCGCTGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTGGcac  >  2:2275922/1‑93 (MQ=255)

ATTACGCCGCTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCCGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTGGCAC  >  NC_000913/3008552‑3008730

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`