BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,154,617	T→C	intergenic (+85/‑20)	yqhD → / → b3012	putative oxidoreductase/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,154,617	0	T	C	100.0%	947.3 / NA	284	intergenic (+85/‑20)	yqhD/b3012	putative oxidoreductase/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (136/148); total (136/148)

Only 100 of 285 total aligned reads displayed.

CGCTAAGCTTTTTACGCCTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGTTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGACTGGGCGTCTGGC  >  NC_000913/3154527‑3154706

cgcTAAGCTTTTTACGCCTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTc                                                                                         >  2:2684177/1‑93 (MQ=255)

cgcTAAGCTTTTTACGCCTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTc                                                                                         >  1:992158/1‑93 (MQ=255)

  cTAAGCTTTTTACGCCTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCat                                                                                       >  2:6711093/1‑93 (MQ=255)

  cTAAGCTTTTTACGCCTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCat                                                                                       >  2:4649896/1‑93 (MQ=255)

  cTAAGCTTTTTACGCCTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCat                                                                                       >  2:3656784/1‑93 (MQ=255)

   tAAGCTTTTTACGCCTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCata                                                                                      <  2:960873/93‑1 (MQ=255)

   tAAGCTTTTTACGCCTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCata                                                                                      <  1:4412435/93‑1 (MQ=255)

   tAAGCTTTTTACGCCTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCata                                                                                      >  1:3874488/1‑93 (MQ=255)

   tAAGCTTTTTACGCCTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCata                                                                                      >  1:3187554/1‑93 (MQ=255)

   tAAGCTTTTTACGCCTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCata                                                                                      >  1:2588522/1‑93 (MQ=255)

    aaGCTTTTTACGCCTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCatat                                                                                     <  2:5924893/93‑1 (MQ=255)

     aGCTTTTTACGCCTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCAtata                                                                                    >  1:569986/1‑93 (MQ=255)

     aGCTTTTTACGCCTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCAtata                                                                                    >  1:596679/1‑93 (MQ=255)

        tttttACGCCTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAag                                                                                 <  2:144298/93‑1 (MQ=255)

          tttACGCCTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAagga                                                                               >  2:5474990/1‑93 (MQ=255)

            tACGCCTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAaggagg                                                                             >  2:4374406/1‑93 (MQ=255)

             tcGCCTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAggagga                                                                            <  1:2167709/92‑1 (MQ=255)

              cGCCTCAAACTTTCGTTTTCGGTCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGaa                                                                           <  2:2998288/93‑1 (MQ=255)

               gCCTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAAc                                                                          <  2:213299/93‑1 (MQ=255)

               gCCTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAAc                                                                          <  2:3549843/93‑1 (MQ=255)

                 cTCAATCTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGt                                                                        <  1:6283631/93‑1 (MQ=255)

                 cTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGt                                                                        <  1:556004/93‑1 (MQ=255)

                  tCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTa                                                                       <  2:23616/93‑1 (MQ=255)

                    aatcTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATg                                                                     <  1:3434456/90‑1 (MQ=255)

                    aaaCTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATg                                                                     <  2:4988450/93‑1 (MQ=255)

                    aaaCTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCCGTGAGCTCATATAAAGGAGGAACGTATg                                                                     >  1:4158115/1‑93 (MQ=255)

                     aaCTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATgg                                                                    >  2:2022439/1‑93 (MQ=255)

                      aCTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGc                                                                   >  2:6130082/1‑93 (MQ=255)

                       cTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCt                                                                  >  2:1011709/1‑93 (MQ=255)

                        tttCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTa                                                                 >  1:4298276/1‑93 (MQ=255)

                         ttCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACGCCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTaa                                                                <  2:599353/93‑1 (MQ=255)

                         ttCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCtta                                                                <  1:3467231/93‑3 (MQ=255)

                         ttCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTaa                                                                >  1:3581880/1‑93 (MQ=255)

                         ttCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTaa                                                                >  2:5017852/1‑93 (MQ=255)

                           cGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACTCCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATc                                                              <  1:2720551/93‑1 (MQ=255)

                            gTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCGCCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATcc                                                             <  2:76984/93‑1 (MQ=255)

                            gTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATcc                                                             >  2:491833/1‑93 (MQ=255)

                                 cGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCg                                                        >  1:2941277/1‑93 (MQ=255)

                                  gggCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGt                                                       >  1:1306455/1‑93 (MQ=255)

                                  gggCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGt                                                       >  1:5515420/1‑93 (MQ=255)

                                   ggCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGtt                                                      >  1:4561580/1‑93 (MQ=255)

                                   ggCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGtt                                                      <  1:786852/93‑1 (MQ=255)

                                    gCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGtta                                                     <  2:5386254/93‑1 (MQ=255)

                                      aTTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGttatt                                                   >  1:4484394/1‑93 (MQ=255)

                                      aTTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGttatt                                                   >  2:1506839/1‑93 (MQ=255)

                                      aTTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGgtatt                                                   >  2:4769605/1‑93 (MQ=255)

                                      aTTTCGGCGAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACTTATGGCTAATCCAACCGttatt                                                   <  1:2777073/93‑1 (MQ=255)

                                       tttCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGttatta                                                  <  2:346611/93‑1 (MQ=255)

                                       tttCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGttatta                                                  >  1:2283157/1‑93 (MQ=255)

                                          cGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGc                                               <  2:4182149/93‑1 (MQ=255)

                                           gTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCt                                              >  1:5110473/1‑93 (MQ=255)

                                           gTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCt                                              >  1:3680491/1‑93 (MQ=255)

                                           gTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCt                                              >  1:2718127/1‑93 (MQ=255)

                                           gTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCGCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCt                                              <  1:696880/93‑1 (MQ=255)

                                            tCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTa                                             >  2:5853207/1‑93 (MQ=255)

                                             ccAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTAc                                            <  2:860737/93‑1 (MQ=255)

                                              cAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACa                                           >  2:6049749/1‑93 (MQ=255)

                                              cAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACa                                           <  2:2311694/93‑1 (MQ=255)

                                                 aCTTAAGTTCACAACCCCTCCCCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGa                                        <  2:2223754/93‑1 (MQ=255)

                                                 aCTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGa                                        <  1:3306945/93‑1 (MQ=255)

                                                  cTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACAGTTATTAAGCTACAggct                                       >  1:1566350/1‑91 (MQ=255)

                                                   ttAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGATAATCCAACCGTTATTAAGCTACAGGATg                                      >  2:2588021/1‑93 (MQ=255)

                                                    tAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATgg                                     <  1:4591257/93‑1 (MQ=255)

                                                       gTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCaa                                  <  2:5205399/93‑1 (MQ=255)

                                                        ttCACAACACCTCACCGGAGCCTGCTCCGCTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAAt                                 <  2:3118851/93‑1 (MQ=255)

                                                            caacaCCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCa                             <  2:1610802/93‑1 (MQ=255)

                                                             aacaCCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCAt                            >  2:373220/1‑93 (MQ=255)

                                                              acacCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATg                           >  1:534275/1‑93 (MQ=255)

                                                               cacCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGc                          <  1:3049265/93‑1 (MQ=255)

                                                                acCTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGcc                         >  2:3945254/1‑93 (MQ=255)

                                                                 ccTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGccc                        <  1:1026125/93‑1 (MQ=255)

                                                                  cTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGcccc                       >  1:1854031/1‑93 (MQ=255)

                                                                  cTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGcccc                       >  1:5158167/1‑93 (MQ=255)

                                                                  cTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGcccc                       <  1:6582991/93‑1 (MQ=255)

                                                                  cTCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGATAATCCAACCGTTATTAAGCTACAGGATGGCAATGGCATGcccc                       >  1:1194353/1‑93 (MQ=255)

                                                                   tCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCa                      >  1:2252122/1‑93 (MQ=255)

                                                                   tCACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCa                      <  1:2087093/93‑1 (MQ=255)

                                                                    cACCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAg                     >  1:1924112/1‑93 (MQ=255)

                                                                     aCCGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGc                    <  1:473069/93‑1 (MQ=255)

                                                                      ccGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCt                   <  1:1802638/93‑1 (MQ=255)

                                                                       cGGAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTg                  >  1:6485619/1‑93 (MQ=255)

                                                                         gAGCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTggg                <  2:2771317/93‑1 (MQ=255)

                                                                           gCCTGCTCCGGTGAGCTTATATAAAGGAGGAACGTATGGGTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGAc              <  2:3850843/93‑1 (MQ=255)

                                                                           gCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAATCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGAc              <  1:1416949/93‑1 (MQ=255)

                                                                           gCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGAc              >  2:1690201/1‑93 (MQ=255)

                                                                           gCCTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGAc              <  2:2527791/93‑1 (MQ=255)

                                                                            ccTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGACt             >  2:1319106/1‑93 (MQ=255)

                                                                            ccTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGACt             <  1:4993949/93‑1 (MQ=255)

                                                                             cTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGACTg            >  1:3987808/1‑93 (MQ=255)

                                                                             cTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGACTg            <  1:3922650/93‑1 (MQ=255)

                                                                             cTGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGACTg            <  2:6597150/93‑1 (MQ=255)

                                                                              tGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGACTgg           <  2:5571586/93‑1 (MQ=255)

                                                                              tGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGACTgg           <  1:3391766/93‑1 (MQ=255)

                                                                              tGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGACTgg           <  2:6352508/93‑1 (MQ=255)

                                                                              tGCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGACTgg           >  2:480260/1‑93 (MQ=255)

                                                                              cgCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGACTgg           <  1:5230341/92‑1 (MQ=255)

                                                                               gCTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGACTggg          <  2:1191182/93‑1 (MQ=255)

                                                                                cTCCGGTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGACTGGGc         <  2:1776093/93‑1 (MQ=255)

                                                                                     gTGAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGACTGGGCGTCTg    <  1:1069836/93‑1 (MQ=255)

                                                                                       gAGCTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGACTGGGCGTCTGgc  >  2:2628636/1‑93 (MQ=255)

CGCTAAGCTTTTTACGCCTCAAACTTTCGTTTTCGGGCATTTCGTCCAGACTTAAGTTCACAACACCTCACCGGAGCCTGCTCCGGTGAGTTCATATAAAGGAGGAACGTATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGACTGGGCGTCTGGC  >  NC_000913/3154527‑3154706

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`