BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,164,065	T→C	intergenic (‑76/+62)	parC ← / ← b3020	DNA topoisomerase IV subunit A/putative transport periplasmic protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,164,065	0	T	C	100.0%	1040.0 / NA	321	intergenic (‑76/+62)	parC/b3020	DNA topoisomerase IV subunit A/putative transport periplasmic protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (190/131); total (190/131)

Only 100 of 334 total aligned reads displayed.

TGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGATATACAACTCTTTG  >  NC_000913/3163975‑3164154

tGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCg                                                                                         >  1:4301077/1‑93 (MQ=255)

tGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCg                                                                                         <  2:2989172/93‑1 (MQ=255)

 gCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGa                                                                                        >  2:5305129/1‑93 (MQ=255)

    atatCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTc                                                                                     <  1:2692467/93‑1 (MQ=255)

     tatCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTca                                                                                    >  2:4207284/1‑93 (MQ=255)

     tatCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTca                                                                                    >  2:1779057/1‑93 (MQ=255)

       tCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTcaca                                                                                  >  2:3028941/1‑93 (MQ=255)

         gCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAgg                                                                                >  2:914616/1‑93 (MQ=255)

          cTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGga                                                                               >  2:3434711/1‑93 (MQ=255)

          cTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGga                                                                               <  1:6411518/93‑1 (MQ=255)

           tCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGgag                                                                              <  2:2580917/93‑1 (MQ=255)

           tCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGgag                                                                              >  1:6257350/1‑93 (MQ=255)

            cATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGgaga                                                                             >  1:6110766/1‑93 (MQ=255)

             atgaaTTCTGATCCCTCAACTTATTCGCCAGCCTTAAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGAt                                                                            <  1:5176984/90‑1 (MQ=255)

             aTTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGAt                                                                            >  2:2293741/1‑93 (MQ=255)

             aTTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGAt                                                                            >  1:81341/1‑93 (MQ=255)

             aTTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGAt                                                                            >  1:45266/1‑93 (MQ=255)

              ttAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATc                                                                           >  2:3763919/1‑93 (MQ=255)

                    cTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTg                                                                     >  1:1120805/1‑93 (MQ=255)

                      gATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGaa                                                                   >  1:5258756/1‑93 (MQ=255)

                      gATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGaa                                                                   >  1:464786/1‑93 (MQ=255)

                      gATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGaa                                                                   >  2:650636/1‑93 (MQ=255)

                        ttCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATa                                                                 <  1:3632665/93‑1 (MQ=255)

                        ttCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATa                                                                 >  1:5929883/1‑93 (MQ=255)

                        ttCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATa                                                                 <  2:191626/93‑1 (MQ=255)

                        ttCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATa                                                                 <  2:4809283/93‑1 (MQ=255)

                          ccTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAgc                                                               >  2:6273258/1‑93 (MQ=255)

                          ccTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAgc                                                               <  2:427881/93‑1 (MQ=255)

                           cTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAgcg                                                              >  2:3233641/1‑93 (MQ=255)

                            tCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAgcgc                                                             >  1:3654460/1‑93 (MQ=255)

                             cAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGcgcc                                                            <  2:4027588/93‑1 (MQ=255)

                             cAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGcgcc                                                            >  2:4583565/1‑93 (MQ=255)

                                cTTATTCGCAACCCTACAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCgccgcc                                                         <  1:606960/93‑1 (MQ=255)

                                 ttATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGccgccg                                                        >  2:5202728/1‑93 (MQ=255)

                                 ttATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGccgccg                                                        >  1:278557/1‑93 (MQ=255)

                                    ttCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGAc                                                     >  2:2452369/1‑93 (MQ=255)

                                    ttCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGAc                                                     <  2:1669150/93‑1 (MQ=255)

                                      cGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGt                                                   <  2:5989495/93‑1 (MQ=255)

                                       gCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTg                                                  >  1:4362045/1‑93 (MQ=255)

                                       gCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTg                                                  >  1:3427974/1‑93 (MQ=255)

                                         cAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCt                                                <  2:1393845/93‑1 (MQ=255)

                                          acccTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTc                                               <  1:546468/91‑1 (MQ=255)

                                           gCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTcc                                              >  1:2657088/1‑93 (MQ=255)

                                           gCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTcc                                              >  2:655708/1‑93 (MQ=255)

                                           gCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTcc                                              >  1:4038421/1‑93 (MQ=255)

                                           gCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTcc                                              >  1:3714665/1‑93 (MQ=255)

                                             cTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGa                                            >  2:1628226/1‑93 (MQ=255)

                                              ttCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGAc                                           >  2:4429658/1‑93 (MQ=255)

                                              ttCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGAc                                           <  1:561474/93‑1 (MQ=255)

                                               tCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACg                                          >  1:3560961/1‑93 (MQ=255)

                                                cAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACgg                                         >  1:1033607/1‑93 (MQ=255)

                                                 aaaGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGc                                        >  1:74239/1‑93 (MQ=255)

                                                 aaaGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGc                                        >  2:3355198/1‑93 (MQ=255)

                                                  aaGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCg                                       >  1:6026595/1‑93 (MQ=255)

                                                   aGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGa                                      >  1:1899923/1‑93 (MQ=255)

                                                    ggggCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGAt                                     <  1:1213835/93‑1 (MQ=255)

                                                    ggggCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGAt                                     <  1:5005393/93‑1 (MQ=255)

                                                    ggggCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGAt                                     >  2:2126618/1‑93 (MQ=255)

                                                     gtgCAATATTGCGGGAGATGCTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATa                                    <  1:2192830/91‑1 (MQ=255)

                                                      ggCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATaa                                   <  2:5040120/93‑1 (MQ=255)

                                                       gccatatTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGACATCAACGTCAATAGCGCCGCCAGACGTGCTCCGACGGCGATaaa                                  >  2:5393551/4‑93 (MQ=255)

                                                       gCAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATaaa                                  >  2:5593269/1‑93 (MQ=255)

                                                       gCAATATTGCCGAAAATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATaaa                                  <  1:6669584/93‑1 (MQ=255)

                                                        cAATATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAg                                 >  1:348196/1‑93 (MQ=255)

                                                         aaTATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAgg                                >  1:6493190/1‑93 (MQ=255)

                                                         aaTATTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAgg                                >  1:4959276/1‑93 (MQ=255)

                                                          atatTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCACCGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGc                               <  2:3558004/93‑1 (MQ=255)

                                                          atatTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGc                               >  1:4193089/1‑93 (MQ=255)

                                                          atatTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGc                               >  2:6143269/1‑93 (MQ=255)

                                                          atatTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGc                               >  2:130464/1‑93 (MQ=255)

                                                            atTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCAt                             >  1:5813237/1‑93 (MQ=255)

                                                            atTGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCAt                             >  1:1420353/1‑93 (MQ=255)

                                                             ttGCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATc                            <  2:3684966/93‑1 (MQ=255)

                                                               gCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCaa                          >  2:5814342/1‑93 (MQ=255)

                                                               gCCGGAGATACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCaa                          >  1:1284095/1‑93 (MQ=255)

                                                                   gagaTACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAAtgtg                      >  1:963358/1‑93 (MQ=255)

                                                                    agaTACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGc                     >  2:3936093/1‑93 (MQ=255)

                                                                     gaTACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGcc                    >  2:6341574/1‑93 (MQ=255)

                                                                      aTACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCt                   <  2:6640103/93‑1 (MQ=255)

                                                                      aTACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCt                   <  2:2377649/93‑1 (MQ=255)

                                                                      aTACTACATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCt                   <  2:5720716/93‑1 (MQ=255)

                                                                        actacATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTg                 >  2:1073787/1‑93 (MQ=255)

                                                                         ctacATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGa                <  2:2528787/93‑1 (MQ=255)

                                                                         ctacATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGa                >  1:2231039/1‑93 (MQ=255)

                                                                          tacATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGat               >  1:1689570/1‑93 (MQ=255)

                                                                          tacATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGat               <  1:2485742/93‑1 (MQ=255)

                                                                            cATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGatat             <  1:3098785/93‑1 (MQ=255)

                                                                            cATTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGatat             >  2:5515921/1‑93 (MQ=255)

                                                                             aTTATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCCGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGAtata            >  1:4806875/1‑93 (MQ=255)

                                                                              ttATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGATATAc           >  1:1434/1‑93 (MQ=255)

                                                                              ttATCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGATATAc           >  2:6050600/1‑93 (MQ=255)

                                                                                aTCTTCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGATATACaa         >  2:833742/1‑93 (MQ=255)

                                                                                aTCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGATATACac         >  1:3248271/1‑92 (MQ=255)

                                                                                 tCTGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGATATACAAc        <  2:150357/93‑1 (MQ=255)

                                                                                   tGCCGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGATATACAActc      >  2:282546/1‑93 (MQ=255)

                                                                                   tGCCGCGCAGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGATATACAActc      <  1:2065549/93‑1 (MQ=255)

                                                                                     ccGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGATATACAACTCtt    <  2:1948456/93‑1 (MQ=255)

                                                                                     ccGCGCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGATATACAACTCtt    <  1:289779/93‑1 (MQ=255)

                                                                                      cgcgCCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGATATACAACTCttt   >  2:4944563/1‑93 (MQ=255)

                                                                                       gcgcCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGATATACAACTCTTTg  >  2:1989777/1‑93 (MQ=255)

TGCCATATCGCTCATTAATTCTGATTCCTCAACTTATTCGCCAGCCTTCAAAGGGGCAATATTGCCGGAGATACTACATTATCTGCCGCGTCGAGTCACAGGAGATCAACGTGAATAGCGCCGCCGGACGTGCTCCGACGGCGATAAAGGCATCAATGTGCCTTGATATACAACTCTTTG  >  NC_000913/3163975‑3164154

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`