BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,168,017	T→C	D58D (GAT→GAC)	qseB →	quorum sensing regulator B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,168,017	0	T	C	100.0%	840.8 / NA	256	D58D (GAT→GAC)	qseB	quorum sensing regulator B
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (119/137); total (119/137)

Only 100 of 277 total aligned reads displayed.

CTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCGCGCGATGCGCTGGCGGAACGTGT  >  NC_000913/3167927‑3168106

cTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatggacgg                                                                                         <  1:6696608/93‑1 (MQ=255)

cTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatggacgg                                                                                         >  2:635009/1‑93 (MQ=255)

 tGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGt                                                                                        >  1:5742523/1‑93 (MQ=255)

  ggTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTc                                                                                       <  2:1405417/93‑1 (MQ=255)

  ggTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTc                                                                                       <  1:3788986/93‑1 (MQ=255)

   gTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTcg                                                                                      <  2:4461364/93‑1 (MQ=255)

   gTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTcg                                                                                      <  1:249712/93‑1 (MQ=255)

   gTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTcg                                                                                      >  1:1347191/1‑93 (MQ=255)

    tttACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTcgc                                                                                     >  1:3077697/1‑93 (MQ=255)

     ttACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTcgcg                                                                                    <  1:830298/93‑1 (MQ=255)

       acacAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGat                                                                                  <  2:2713009/93‑1 (MQ=255)

            aGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATAtttt                                                                             >  1:3348231/1‑93 (MQ=255)

               tcgtcATGGAAAAGAGGCGCTTTATAGCGCACCTTATGAGGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTgcg                                                                          <  2:1746034/93‑1 (MQ=255)

               tcgtcAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTgcg                                                                          <  1:6244667/93‑1 (MQ=255)

                cgtcAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTgcgc                                                                         <  1:5609621/93‑1 (MQ=255)

                cgtcAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTgcgc                                                                         <  2:6555778/93‑1 (MQ=255)

                cgtcAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTgcgc                                                                         >  2:4792990/1‑93 (MQ=255)

                 gtcAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGcgcg                                                                        >  2:5142061/1‑93 (MQ=255)

                   cAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGaa                                                                      >  2:2474897/1‑93 (MQ=255)

                   cAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGaa                                                                      <  2:2242465/93‑1 (MQ=255)

                     gggAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATg                                                                    <  2:6119977/93‑1 (MQ=255)

                     gggAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATg                                                                    >  1:5486402/1‑93 (MQ=255)

                     gggAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATg                                                                    <  1:1937345/93‑1 (MQ=255)

                     gggAAAAAAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATg                                                                    >  1:6331862/1‑93 (MQ=255)

                      ggAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATgg                                                                   <  1:942165/93‑1 (MQ=255)

                       gAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGc                                                                  <  2:587986/93‑1 (MQ=255)

                       gAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGc                                                                  <  1:5028898/93‑1 (MQ=255)

                         aaaGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCga                                                                <  2:5455269/93‑1 (MQ=255)

                         aaaGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCga                                                                <  1:4765606/93‑1 (MQ=255)

                          aaGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCgag                                                               >  2:4773715/1‑93 (MQ=255)

                           agagGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCgaga                                                              <  2:3415440/93‑1 (MQ=255)

                           agagGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCgaga                                                              >  1:6034420/1‑93 (MQ=255)

                            gagGCGCTTTATCGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCCGGCATGGACAGTCGCGACATTTTGCGCGAATGGCGAGaa                                                             >  1:6422372/1‑93 (MQ=255)

                            gagGCGCTATATAGCGCACTTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGaa                                                             >  1:6524900/1‑93 (MQ=255)

                             agGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGaaa                                                            >  2:700934/1‑93 (MQ=255)

                               gcgcTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGaaaaa                                                          <  1:3914097/93‑1 (MQ=255)

                               gcgcTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGaaaaa                                                          <  2:2920833/93‑1 (MQ=255)

                               gcgcTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGaaaaa                                                          <  2:5323860/93‑1 (MQ=255)

                                 gcTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAgg                                                        <  2:1626235/93‑1 (MQ=255)

                                  cTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGt                                                       <  1:1007878/93‑1 (MQ=255)

                                  cTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGt                                                       <  1:1843956/93‑1 (MQ=255)

                                   tttATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTc                                                      <  1:100057/93‑1 (MQ=255)

                                   tttATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTc                                                      <  2:104817/93‑1 (MQ=255)

                                    ttATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGATAAAAAGGTCa                                                     <  1:4075437/93‑1 (MQ=255)

                                    ttATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCa                                                     >  2:1933102/1‑93 (MQ=255)

                                    ttATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCa                                                     <  1:3865651/93‑1 (MQ=255)

                                    ttATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCa                                                     >  2:659787/1‑93 (MQ=255)

                                    ttATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCa                                                     <  1:236693/93‑1 (MQ=255)

                                     tataGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAg                                                    <  1:4539140/93‑1 (MQ=255)

                                     tataGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAg                                                    >  1:1774561/1‑93 (MQ=255)

                                      ataGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGc                                                   <  1:2668655/93‑1 (MQ=255)

                                       taGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCg                                                  >  2:4314227/1‑93 (MQ=255)

                                        aGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGt                                                 <  2:3965087/93‑1 (MQ=255)

                                        aGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGt                                                 <  2:6471749/93‑1 (MQ=255)

                                         gcgcACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTg                                                <  2:229990/93‑1 (MQ=255)

                                           gcACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAg                                              <  2:930331/93‑1 (MQ=255)

                                            cACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGc                                             <  2:3190784/93‑1 (MQ=255)

                                             aCCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGcc                                            >  2:2613046/1‑93 (MQ=255)

                                             aCCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGcc                                            >  1:2827294/1‑93 (MQ=255)

                                                 tATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTa                                        <  1:5873182/93‑1 (MQ=255)

                                                  atgatgCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTAc                                       <  2:5660076/93‑1 (MQ=255)

                                                  atgatgCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTAc                                       <  1:3138866/93‑1 (MQ=255)

                                                     atgCGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGa                                    <  1:1630318/93‑1 (MQ=255)

                                                        cGGTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATcc                                 <  2:366986/93‑1 (MQ=255)

                                                         ggTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCt                                >  2:2000020/1‑93 (MQ=255)

                                                         ggTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCt                                >  1:1536027/1‑93 (MQ=255)

                                                          gTGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTg                               >  1:1398333/1‑93 (MQ=255)

                                                           tGATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGa                              <  1:2281266/93‑1 (MQ=255)

                                                            gATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGAc                             <  1:613068/93‑1 (MQ=255)

                                                            gATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGAc                             >  1:736971/1‑93 (MQ=255)

                                                            gATCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGAc                             >  1:3636991/1‑93 (MQ=255)

                                                             aTCCTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGAcc                            >  1:244478/1‑93 (MQ=255)

                                                               ccTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACcgc                          >  2:3509184/1‑93 (MQ=255)

                                                                cTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACcgcg                         >  2:849103/1‑93 (MQ=255)

                                                                cTGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACcgcg                         >  2:2680057/1‑93 (MQ=255)

                                                                 tGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACcgcgc                        >  1:4736340/1‑93 (MQ=255)

                                                                 tGGATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACcgcgc                        <  2:1191590/93‑1 (MQ=255)

                                                                  ggATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACcgcgcg                       <  2:2376481/93‑1 (MQ=255)

                                                                  ggATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACcgcgcg                       <  2:2126906/93‑1 (MQ=255)

                                                                   gATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACcgcgcgg                      >  1:4501951/1‑92 (MQ=255)

                                                                   gATTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACcgcgcgc                      <  2:1856311/93‑1 (MQ=255)

                                                                    aTTTAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACcgcgcgcg                     <  2:407460/93‑1 (MQ=255)

                                                                     tttAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCGCGCGa                    <  1:3506748/93‑1 (MQ=255)

                                                                     tttAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCGCGCGa                    >  1:5699738/1‑93 (MQ=255)

                                                                      ttAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCGCGCGAt                   <  2:3432078/93‑1 (MQ=255)

                                                                      ttAACCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCGCGCGAt                   <  2:6202736/93‑1 (MQ=255)

                                                                        aaCCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCGCGCGATgc                 <  1:5393565/93‑1 (MQ=255)

                                                                        aaCCTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCGCGCGATgc                 <  2:6001469/93‑1 (MQ=255)

                                                                           cTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGCCCGCGCGCGATGCGCt              <  2:1563160/93‑1 (MQ=255)

                                                                           cTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCGCGCGATGCGCt              >  1:4246185/1‑93 (MQ=255)

                                                                           cTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCGCGCGATGCGCt              <  1:5205555/93‑1 (MQ=255)

                                                                           cTTACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCGCGCGATGCGCt              <  2:2724450/93‑1 (MQ=255)

                                                                            ttACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCGCGCGATGCGCTg             >  1:206191/1‑93 (MQ=255)

                                                                             tACCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCGCGCGATGCGCTgg            >  1:1178870/1‑93 (MQ=255)

                                                                              aCCAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCGCGCGATGCGCTGGc           >  1:5966889/1‑93 (MQ=255)

                                                                               ccAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCGCGCGATGCGCTGGCg          >  1:6155234/1‑93 (MQ=255)

                                                                                cAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCGCGCGATGCGCTGGCgg         >  2:4376572/1‑93 (MQ=255)

                                                                                cAGGCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCGCGCGATGCGCTGGCgg         <  1:2193436/93‑1 (MQ=255)

                                                                                   gCATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCGCGCGATGCGCTGGCGGAAc      >  1:5574077/1‑93 (MQ=255)

                                                                                    cATGGACGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCGCGCGATGCGCTGGCGGAACg     <  2:5954698/93‑1 (MQ=255)

CTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCGCGCGATGCGCTGGCGGAACGTGT  >  NC_000913/3167927‑3168106

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`