BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,183,028	T→C	V70A (GTC→GCC)	b3042 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,183,028	0	T	C	100.0%	724.2 / NA	225	V70A (GTC→GCC)	b3042	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (96/129); total (96/129)

Only 100 of 231 total aligned reads displayed.

ATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCA  >  NC_000913/3182938‑3183116

gttcggAGAAAAAAATCCGCCAACCCCGACATGCGCATCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGccc                                                                                        <  2:3759593/89‑1 (MQ=255)

aTGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCGGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGccc                                                                                        <  2:5557326/93‑1 (MQ=255)

 tgtgGAGAAAAAAATCCGCCAAGCCATACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCt                                                                                       <  2:5418580/93‑1 (MQ=255)

 tgtgGAGAAAAAAATCCGCCAACCCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCt                                                                                       <  2:5071736/93‑1 (MQ=255)

 tgtgGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCt                                                                                       <  1:3091077/93‑1 (MQ=255)

 tgtgGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACATTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCt                                                                                       >  2:6514578/1‑93 (MQ=255)

   gggAGAAAAAAACCCGCCAACCCCTACAGCCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGt                                                                                     <  2:2477220/92‑1 (MQ=255)

    ggAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAGACGCAAGCCCTGtt                                                                                    >  2:6090174/1‑93 (MQ=255)

    ggAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGtt                                                                                    <  1:3321879/93‑1 (MQ=255)

    ggAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGtt                                                                                    >  1:2431059/1‑93 (MQ=255)

    ggAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGtt                                                                                    >  1:4505678/1‑93 (MQ=255)

      aaaaaaaaaCCCGCAAACCCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTAc                                                                                  <  2:75049/91‑1 (MQ=255)

         aaataaTCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGa                                                                               <  1:2829607/93‑1 (MQ=255)

          aaaaaTCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGAc                                                                              <  2:5290075/93‑1 (MQ=255)

           aaaaTCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACt                                                                             <  2:3826349/93‑1 (MQ=255)

           aaaaTCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACt                                                                             >  2:2729321/1‑93 (MQ=255)

             aaTCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCg                                                                           <  2:421513/93‑1 (MQ=255)

             aaTCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCg                                                                           >  2:2951510/1‑93 (MQ=255)

              aTCCGCCAACCCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGt                                                                          <  1:3174822/93‑1 (MQ=255)

              aTCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGt                                                                          <  2:6197606/93‑1 (MQ=255)

              aTCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGt                                                                          <  1:3971842/93‑1 (MQ=255)

                  gCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGaaa                                                                      <  1:632840/93‑1 (MQ=255)

                   ccAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGaaaa                                                                     >  1:565079/1‑93 (MQ=255)

                    cAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGaaaaa                                                                    >  2:1552595/1‑93 (MQ=255)

                     aaccccTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAAc                                                                   <  1:4769014/90‑1 (MQ=255)

                      aaCCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACt                                                                  <  2:4366220/93‑1 (MQ=255)

                      aaCCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACt                                                                  >  2:5998125/1‑93 (MQ=255)

                        cccTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTgg                                                                >  2:4203472/1‑93 (MQ=255)

                         ccTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGgc                                                               >  1:1238846/1‑93 (MQ=255)

                          cTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGgcg                                                              >  2:2128012/1‑93 (MQ=255)

                          cTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGgcg                                                              >  2:4476271/1‑93 (MQ=255)

                          cTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGgcg                                                              >  1:2156109/1‑93 (MQ=255)

                           tccAAGGGCAGCTGACGCGCCTAGACCTTGTAAGCCGTGAAGAGTTGGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGgcgc                                                             <  1:6435362/91‑1 (MQ=255)

                           tACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGgcgc                                                             <  1:4439430/93‑1 (MQ=255)

                           caCAGGCGCAGCTGCCGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGgcgc                                                             <  1:3488248/92‑1 (MQ=255)

                           caCAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGgcgc                                                             <  1:6703132/92‑1 (MQ=255)

                             cAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCgctg                                                           >  2:3393661/1‑93 (MQ=255)

                             cAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCgctg                                                           >  2:3322487/1‑93 (MQ=255)

                             cAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCgctg                                                           <  2:460846/93‑1 (MQ=255)

                              aaGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCgctgc                                                          >  1:2957260/1‑93 (MQ=255)

                               aGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCgctgct                                                         <  2:5042804/93‑1 (MQ=255)

                               aGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCgctgct                                                         <  1:5563648/93‑1 (MQ=255)

                                   cAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGaa                                                     >  1:5756778/1‑93 (MQ=255)

                                     gCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACa                                                   >  2:3698308/1‑93 (MQ=255)

                                     gCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGCACTCGTGAAAAACTGGCGCTGCTTGAACa                                                   >  2:4700165/1‑93 (MQ=255)

                                       tGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACaaa                                                 <  2:3189412/93‑1 (MQ=255)

                                       tGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACaaa                                                 <  2:595824/93‑1 (MQ=255)

                                       tGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACaaa                                                 <  1:6091081/93‑1 (MQ=255)

                                        gACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACaaaa                                                >  2:2039644/1‑92 (MQ=255)

                                        gACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAg                                                <  1:3118557/93‑1 (MQ=255)

                                          cgcgCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGaa                                              <  1:4348867/93‑1 (MQ=255)

                                             gcCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCa                                           <  2:1806901/93‑1 (MQ=255)

                                              ccTCGACCTTGTAAGCTGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAg                                          <  1:6194549/93‑1 (MQ=255)

                                              ccTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAg                                          <  2:4942230/93‑1 (MQ=255)

                                               cTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGc                                         >  2:4439811/1‑93 (MQ=255)

                                                tCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCg                                        >  2:2651578/1‑93 (MQ=255)

                                                    ccTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACt                                    <  2:16478/93‑1 (MQ=255)

                                                     cTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTg                                   <  2:1858844/93‑1 (MQ=255)

                                                        gTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGaa                                >  2:3500639/1‑93 (MQ=255)

                                                         tAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGaaa                               >  1:5053/1‑93 (MQ=255)

                                                          aaGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGaaaa                              <  2:1765342/93‑1 (MQ=255)

                                                          aaGCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGaaaa                              <  2:1379051/93‑1 (MQ=255)

                                                           aGCCATGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAAt                             >  2:6233123/1‑93 (MQ=255)

                                                            gCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATc                            <  2:6657032/93‑1 (MQ=255)

                                                            gCCGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATc                            <  1:5314471/93‑1 (MQ=255)

                                                             ccGTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCg                           <  2:2363261/93‑1 (MQ=255)

                                                               gTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCa                         <  2:17234/93‑1 (MQ=255)

                                                               gTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCa                         <  1:930217/93‑1 (MQ=255)

                                                               gTGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCa                         <  1:1250314/93‑1 (MQ=255)

                                                                tGAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAg                        <  1:5218051/93‑1 (MQ=255)

                                                                 gAAGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGt                       <  1:1900169/93‑1 (MQ=255)

                                                                  aaGAGTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTa                      >  1:5578672/1‑93 (MQ=255)

                                                                   agagTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTAc                     >  1:13769/1‑93 (MQ=255)

                                                                   agagTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTAc                     <  2:4010955/93‑1 (MQ=255)

                                                                    gagTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACt                    <  2:1183320/93‑1 (MQ=255)

                                                                    gagTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACt                    <  2:6560269/93‑1 (MQ=255)

                                                                      gTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTga                  >  1:422110/1‑93 (MQ=255)

                                                                      gTTCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTga                  <  1:1199635/93‑1 (MQ=255)

                                                                       ttCGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTgag                 <  2:1170184/93‑1 (MQ=255)

                                                                        tCGATGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTgaga                <  1:5488115/93‑1 (MQ=255)

                                                                         cGACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGAt               <  1:703456/93‑1 (MQ=255)

                                                                          gACGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATc              >  1:6062597/1‑93 (MQ=255)

                                                                           aCGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCa             <  2:1814331/93‑1 (MQ=255)

                                                                           aCGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCa             <  1:1535388/93‑1 (MQ=255)

                                                                            cGTCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCaa            >  1:1668041/1‑93 (MQ=255)

                                                                              tCCAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCaaaa          >  2:3238615/1‑93 (MQ=255)

                                                                               ccAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCaaaaa         <  1:2697126/93‑1 (MQ=255)

                                                                               ccAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCaaaaa         <  1:1770026/93‑1 (MQ=255)

                                                                                cAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATGAAAAag        >  1:2868383/1‑93 (MQ=255)

                                                                                cAAACGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAag        <  1:767113/93‑1 (MQ=255)

                                                                                 aaaCGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAagc       >  2:582393/1‑93 (MQ=255)

                                                                                  aaCGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAagca      >  1:5387184/1‑93 (MQ=255)

                                                                                  aaCGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAagca      >  1:5844896/1‑93 (MQ=255)

                                                                                  aaCGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAagca      >  2:148392/1‑93 (MQ=255)

                                                                                  aaCGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAagca      >  1:2174486/1‑93 (MQ=255)

                                                                                  aaCGCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAagca      >  1:378460/1‑93 (MQ=255)

                                                                                     gCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGcc   >  2:1745695/1‑93 (MQ=255)

                                                                                     gCAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGcc   <  2:3866953/93‑1 (MQ=255)

                                                                                      cAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCa  <  2:1123734/93‑1 (MQ=255)

                                                                                      cAAGCCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCa  <  2:574002/93‑1 (MQ=255)

ATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCA  >  NC_000913/3182938‑3183116

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`