BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,188,237	T→C	V114A (GTG→GCG)	b3047 →	putative membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,188,237	0	T	C	100.0%	952.3 / NA	293	V114A (GTG→GCG)	b3047	putative membrane protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (169/124); total (169/124)

Only 100 of 307 total aligned reads displayed.

ATCCCAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGTGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAACTATTCTGGCGGCCAAAAGCCA  >  NC_000913/3188147‑3188326

aTCCCAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAATAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACgcgc                                                                                         <  2:6531599/93‑1 (MQ=255)

aTCCCAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACgcgc                                                                                         >  2:5247321/1‑93 (MQ=255)

 tCCCAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAAcgcgcg                                                                                        >  2:2803238/1‑93 (MQ=255)

 tCCCAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAAcgcgcg                                                                                        >  1:4053387/1‑93 (MQ=255)

   ccAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCgag                                                                                      >  1:111726/1‑93 (MQ=255)

   ccAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCgag                                                                                      >  2:5147433/1‑93 (MQ=255)

   ccAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCgag                                                                                      <  2:2947244/93‑1 (MQ=255)

   ccAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCgag                                                                                      <  2:2589199/93‑1 (MQ=255)

    cAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCgaga                                                                                     <  1:3320597/93‑1 (MQ=255)

    cAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCgaga                                                                                     >  2:4086603/1‑93 (MQ=255)

    cAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCgaga                                                                                     >  1:2025338/1‑93 (MQ=255)

      gTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGaaa                                                                                   <  1:1895860/93‑1 (MQ=255)

      gTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGaaa                                                                                   >  2:1352723/1‑93 (MQ=255)

      gTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGaaa                                                                                   >  2:139035/1‑93 (MQ=255)

      gTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGaaa                                                                                   <  2:5818681/93‑1 (MQ=255)

       tGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAAt                                                                                  <  1:2185844/93‑1 (MQ=255)

        gAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATa                                                                                 >  2:1992130/1‑93 (MQ=255)

        gAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATa                                                                                 >  1:3189160/1‑93 (MQ=255)

         aGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATAc                                                                                >  1:4138461/1‑93 (MQ=255)

         aGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATAc                                                                                >  1:3607124/1‑93 (MQ=255)

              aTTCAAATAAGAATGATAACTCAGGAACAAATTGCTCAACCTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGccc                                                                           >  1:82466/1‑93 (MQ=255)

                tCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCaa                                                                         <  1:210513/93‑1 (MQ=255)

                 cAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCaaa                                                                        >  2:6268259/1‑93 (MQ=255)

                    aTAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACa                                                                     <  1:5794573/93‑1 (MQ=255)

                      aaGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGa                                                                   <  1:1360643/93‑1 (MQ=255)

                      aaGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGa                                                                   >  1:3876789/1‑93 (MQ=255)

                      aaGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGa                                                                   >  2:2329225/1‑93 (MQ=255)

                       aGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGAt                                                                  >  1:5484135/1‑93 (MQ=255)

                       aGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGAt                                                                  <  2:5862815/93‑1 (MQ=255)

                       aGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGAt                                                                  >  2:4712562/1‑93 (MQ=255)

                       aGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGAt                                                                  >  1:6051348/1‑93 (MQ=255)

                          aTGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATaaa                                                               >  2:4246022/1‑93 (MQ=255)

                          aTGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATaaa                                                               >  2:4471295/1‑93 (MQ=255)

                           agATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATaaaa                                                              <  2:3621610/92‑1 (MQ=255)

                             aTAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATaaaaaa                                                            >  2:1181345/1‑93 (MQ=255)

                              tAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATaaaaaaa                                                           >  2:1219410/1‑93 (MQ=255)

                              tAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATaaaaaaa                                                           <  2:904682/93‑1 (MQ=255)

                              tAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATaaaaaaa                                                           >  1:322614/1‑93 (MQ=255)

                                aCTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCTCGAGAAATACCGCCCAAAACAGATAAAAAAAAt                                                         <  1:4531256/93‑1 (MQ=255)

                                aCTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAAt                                                         <  2:3325613/93‑1 (MQ=255)

                                    aGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGa                                                     <  2:2897592/93‑1 (MQ=255)

                                     ggAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGAt                                                    >  1:1446797/1‑93 (MQ=255)

                                       aaaaaaTTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGc                                                  >  1:1309802/1‑93 (MQ=255)

                                        aaaaaTTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCa                                                 <  1:2727425/93‑1 (MQ=255)

                                        aaaaaTTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCa                                                 >  1:440215/1‑93 (MQ=255)

                                        aaaaaTTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCa                                                 >  1:927595/1‑93 (MQ=255)

                                         aaaaTTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAACAATGTGATGCaa                                                >  2:4552764/1‑93 (MQ=255)

                                         aaaaTTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCaa                                                <  2:5999278/93‑1 (MQ=255)

                                          aaaTTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAg                                               <  1:331169/93‑1 (MQ=255)

                                          aaaTTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAg                                               <  2:3488055/93‑1 (MQ=255)

                                           aaTTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGt                                              <  1:5587225/93‑1 (MQ=255)

                                             ttGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCa                                            >  2:6385816/1‑93 (MQ=255)

                                              tGCTCACCTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCAc                                           >  1:5694877/1‑93 (MQ=255)

                                                cTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCTCAAAACAGATAAAAAAAATGTGATGCAAGTCACTa                                         <  1:3510924/93‑1 (MQ=255)

                                                cTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTa                                         <  2:6078545/93‑1 (MQ=255)

                                                cTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTa                                         <  2:5972794/93‑1 (MQ=255)

                                                cTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTa                                         <  1:2683628/93‑1 (MQ=255)

                                                 tCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATCCCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTAt                                        <  1:510489/93‑1 (MQ=255)

                                                  cAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATg                                       <  2:4609391/93‑1 (MQ=255)

                                                   aaCTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATgc                                      >  2:448824/1‑93 (MQ=255)

                                                    aCTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATgca                                     >  2:1578801/1‑93 (MQ=255)

                                                    aCTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATgca                                     >  2:714846/1‑93 (MQ=255)

                                                    aCTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATgca                                     <  2:2228329/93‑1 (MQ=255)

                                                      ttCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATgcagc                                   >  1:1691533/1‑93 (MQ=255)

                                                       tCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATgcagca                                  >  2:1714535/1‑93 (MQ=255)

                                                       tCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATgcagca                                  >  2:3829065/1‑93 (MQ=255)

                                                       tCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATgcagca                                  >  1:4999231/1‑93 (MQ=255)

                                                        ccTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCAc                                 <  1:6147908/93‑1 (MQ=255)

                                                         cTAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACg                                <  2:4849309/93‑1 (MQ=255)

                                                          tAAAGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGc                               >  2:2472670/1‑93 (MQ=255)

                                                           aaaGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCa                              >  1:3859742/1‑93 (MQ=255)

                                                            aaGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCAt                             >  1:6410949/1‑93 (MQ=255)

                                                            aaGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGAACGCAt                             >  1:2505072/1‑93 (MQ=255)

                                                             aGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCAtt                            >  1:4587813/1‑93 (MQ=255)

                                                             aGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCAtt                            <  1:4648195/93‑1 (MQ=255)

                                                             aGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCAtt                            >  2:5709965/1‑93 (MQ=255)

                                                             aGACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCAtt                            <  2:621181/93‑1 (MQ=255)

                                                              gACAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTg                           >  1:1044001/1‑93 (MQ=255)

                                                               aCAGAGAAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGa                          <  1:4302254/93‑1 (MQ=255)

                                                                  gagaAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAAc                       <  2:498334/93‑1 (MQ=255)

                                                                  gagaAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAAc                       <  1:1559381/93‑1 (MQ=255)

                                                                   agaAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATTTGATGCAAGTCACTATGCAGCACGCATTGAAACt                      <  1:2816386/93‑1 (MQ=255)

                                                                    gaAACGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAACTa                     >  2:5532950/1‑93 (MQ=255)

                                                                      aaCGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAACTAtt                   >  1:5391942/1‑93 (MQ=255)

                                                                       aCGCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAACTATTc                  <  2:2150914/93‑1 (MQ=255)

                                                                         gCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTTAAACTATTCTg                >  1:1414208/1‑93 (MQ=255)

                                                                         gCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAACTATTCTg                >  1:4943418/1‑93 (MQ=255)

                                                                         gCTCTTCTATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAACTATTCTg                <  1:2960921/93‑1 (MQ=255)

                                                                            cttctATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAACTATTCTggcg             >  1:6308607/1‑93 (MQ=255)

                                                                             ttctATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAACTATTCTggcgg            >  2:6369111/1‑93 (MQ=255)

                                                                              tctATTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAACTATTCTggcggc           >  1:5883465/1‑93 (MQ=255)

                                                                                 aTTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAACTATTCTGGCGGCCaa        <  2:1807062/93‑1 (MQ=255)

                                                                                 aTTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAACTATTCTGGCGGCCaa        >  1:1136127/1‑93 (MQ=255)

                                                                                 aTTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAACTATTCTGGCGGCCaa        >  1:1740130/1‑93 (MQ=255)

                                                                                 aTTTTAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAACTATTCTGGCGGCCaa        >  2:3965925/1‑93 (MQ=255)

                                                                                    ttAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAACTATTCTGGCGGCCAAAAg     >  1:879490/1‑93 (MQ=255)

                                                                                    ttAACGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAACTATTCTGGCGGCCAAAAg     >  2:6699383/1‑93 (MQ=255)

                                                                                       aCGCGCGAGAAATACCGCCTAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAACTATTCTGGCGGCCAAAAGCCa  >  1:6554268/1‑93 (MQ=255)

                                                                                       aCGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAACTATTCTGGCGGCCAAAAGCCa  <  1:483557/93‑1 (MQ=255)

                                                                                       aCGCGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAACTATTCTGGCGGCCAAAAGCCa  >  1:2384569/1‑93 (MQ=255)

ATCCCAGTGAGCAAATTCAAATAAGAATGATAACTCAGGAAAAAATTGCTCAACTTCCTAAAGACAGAGAAACGCTCTTCTATTTTAACGTGCGAGAAATACCGCCCAAAACAGATAAAAAAAATGTGATGCAAGTCACTATGCAGCACGCATTGAAACTATTCTGGCGGCCAAAAGCCA  >  NC_000913/3188147‑3188326

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`