BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,202,618	T→C	I95T (ATC→ACC)	ygiH →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,202,618	0	T	C	100.0%	949.6 / NA	290	I95T (ATC→ACC)	ygiH	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (143/147); total (143/147)

Only 100 of 296 total aligned reads displayed.

AAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGATCTCACCGGAG  >  NC_000913/3202528‑3202707

aaGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCt                                                                                         >  1:5943901/1‑93 (MQ=255)

 aGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTg                                                                                        <  1:133479/93‑1 (MQ=255)

   gAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGc                                                                                      >  2:5506542/1‑93 (MQ=255)

     aTGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGccc                                                                                    >  1:2080179/1‑93 (MQ=255)

      tGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCg                                                                                   >  1:6465222/1‑93 (MQ=255)

        ttGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGtt                                                                                 >  2:4927173/1‑93 (MQ=255)

        ttGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGtt                                                                                 <  1:504358/93‑1 (MQ=255)

         tGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGttt                                                                                <  1:5227352/93‑1 (MQ=255)

         tGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGttt                                                                                >  1:4909418/1‑93 (MQ=255)

         tGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGttt                                                                                <  1:6211199/93‑1 (MQ=255)

          gCCCGTCTGGGGCGCGTATGAATTAGGCGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGtttt                                                                               >  2:4849795/1‑93 (MQ=255)

           cccGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTttc                                                                              >  1:3457430/1‑93 (MQ=255)

            ccGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTttct                                                                             >  1:859835/1‑93 (MQ=255)

            ccGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGACCGTTttct                                                                             >  1:1641235/1‑93 (MQ=255)

              gTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTttcttc                                                                           <  1:2419364/93‑1 (MQ=255)

              gTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTttcttc                                                                           >  1:150412/1‑93 (MQ=255)

              gTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTttcttc                                                                           >  2:1957750/1‑93 (MQ=255)

              gTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTttcttc                                                                           >  2:1511032/1‑93 (MQ=255)

               tCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCg                                                                          >  1:2622166/1‑93 (MQ=255)

                cTGGGGCGCGTATGAATTACGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCgg                                                                         >  2:1234895/1‑93 (MQ=255)

                 tGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTTGACACACCTGGCCCGTTTTCTTCggt                                                                        >  1:5537617/1‑92 (MQ=255)

                 tGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGCTTTCTTCGGa                                                                        >  2:1408987/1‑93 (MQ=255)

                  ggggCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGAt                                                                       <  1:3302351/93‑1 (MQ=255)

                  ggggCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGAt                                                                       >  1:894275/1‑93 (MQ=255)

                  ggggCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGAt                                                                       >  2:3123593/1‑93 (MQ=255)

                   gggCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATCGCCATCGCCGCCTGTCTTGGACACACCTGGCCCCTTTTTTTTGGaat                                                                      >  1:3569780/1‑91 (MQ=255)

                        cgTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAag                                                                 <  1:2984511/93‑1 (MQ=255)

                         gTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAagg                                                                <  2:6168366/93‑1 (MQ=255)

                          tATGAATTGGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAagga                                                               <  2:5074274/93‑1 (MQ=255)

                          tATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAagga                                                               <  1:3961190/93‑1 (MQ=255)

                           aTGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAaggag                                                              <  1:3902786/93‑1 (MQ=255)

                           aTGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAaggag                                                              <  2:2820933/93‑1 (MQ=255)

                           aTGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAaggag                                                              <  1:918630/93‑1 (MQ=255)

                            tGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAaggagg                                                             <  1:289708/93‑1 (MQ=255)

                             gAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAggagga                                                            <  2:5361368/93‑1 (MQ=255)

                             gAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAggagga                                                            <  1:170718/93‑1 (MQ=255)

                              aaTTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGaa                                                           <  2:3260628/93‑1 (MQ=255)

                                ttAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGaaaa                                                         <  1:4120987/93‑1 (MQ=255)

                                    gtgtCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCg                                                     <  2:3500742/93‑1 (MQ=255)

                                      gtCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGtt                                                   <  2:417020/93‑1 (MQ=255)

                                      gtCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGtt                                                   <  1:3238920/93‑1 (MQ=255)

                                      gtCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGtt                                                   <  1:3990181/93‑1 (MQ=255)

                                       tCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTg                                                  >  2:1771273/1‑93 (MQ=255)

                                         aGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCt                                                <  2:4490249/93‑1 (MQ=255)

                                          gCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTa                                               >  2:4720299/1‑93 (MQ=255)

                                          gCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCCTTGCTa                                               >  2:1472668/1‑93 (MQ=255)

                                           ccccTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTAc                                              <  1:6311979/93‑1 (MQ=255)

                                           ccccTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTAc                                              <  2:2479541/93‑1 (MQ=255)

                                           ccccTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTAc                                              <  1:204377/93‑1 (MQ=255)

                                            cccTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTAcc                                             >  1:4153151/1‑93 (MQ=255)

                                            cccTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTAcc                                             <  2:5842885/93‑1 (MQ=255)

                                             ccTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTTTTTCGCTTTTAAAGAGGAAAAAGGGGTGGTAccc                                            >  1:10043/1‑92 (MQ=255)

                                                   ggCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTg                                      <  2:5247816/93‑1 (MQ=255)

                                                   ggCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTg                                      <  2:6001123/93‑1 (MQ=255)

                                                    gCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTgg                                     <  1:1064954/93‑1 (MQ=255)

                                                     cTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGt                                    <  2:3028181/93‑1 (MQ=255)

                                                      tAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTg                                   >  2:3604323/1‑93 (MQ=255)

                                                        ggCTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCAGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGcc                                 <  1:4294741/93‑1 (MQ=255)

                                                          cTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAACGGCGTTGCTACCGCTTTTGGTGCCAt                               >  1:723231/1‑93 (MQ=255)

                                                          cTTAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCAt                               <  2:4349171/93‑1 (MQ=255)

                                                           ttAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTTGTGCCATc                              >  1:3844590/1‑93 (MQ=255)

                                                            tAATTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCg                             >  1:495748/1‑93 (MQ=255)

                                                             aaTTGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGc                            >  1:2200967/1‑93 (MQ=255)

                                                               ttGCCATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCAc                          <  2:2649483/93‑1 (MQ=255)

                                                                  ccATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCa                       >  2:3773376/1‑93 (MQ=255)

                                                                   cATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCAt                      <  2:1463119/93‑1 (MQ=255)

                                                                   cATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCAt                      >  2:1056366/1‑93 (MQ=255)

                                                                   cATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCAt                      >  1:2772533/1‑93 (MQ=255)

                                                                   cATCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCAt                      >  2:203095/1‑93 (MQ=255)

                                                                   cATCGCCGCCTGTCTTGGACACACCTGGCCAGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCAt                      <  1:6728558/93‑1 (MQ=255)

                                                                    aTCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTTTTCGGGTTTAAAGGAGGAAAAAGCGGTGCTACCGCTTTTGGGGCCCTCcccccccct                     >  2:1151533/1‑90 (MQ=255)

                                                                    aTCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCAtt                     <  1:5856990/93‑1 (MQ=255)

                                                                    aTCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCAtt                     >  1:1963018/1‑93 (MQ=255)

                                                                    aTCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCAtt                     <  2:2323031/93‑1 (MQ=255)

                                                                     tCGCCGCCTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTg                    <  1:6561866/93‑1 (MQ=255)

                                                                       gccgccTGTCTTGGACACACCTGGCCCGTTTTCTTCTGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGc                  <  2:562685/93‑1 (MQ=255)

                                                                       gccgccTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGc                  <  2:5533014/93‑1 (MQ=255)

                                                                       gccgccTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGc                  <  2:395272/93‑1 (MQ=255)

                                                                       gccgccTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGc                  >  2:6380213/1‑93 (MQ=255)

                                                                       gccgccTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGc                  <  1:1914393/93‑1 (MQ=255)

                                                                       gccgccTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGc                  <  2:505704/93‑1 (MQ=255)

                                                                         cgccTGTCTTGGACACACCTGGCCCTTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTg                >  1:440605/1‑93 (MQ=255)

                                                                          gccTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTgg               >  1:2551364/1‑93 (MQ=255)

                                                                          gccTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTgg               >  2:6532957/1‑93 (MQ=255)

                                                                           ccTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTggg              <  1:6356448/93‑1 (MQ=255)

                                                                           ccTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTggg              >  2:1529788/1‑93 (MQ=255)

                                                                           ccTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTggg              >  1:5569569/1‑93 (MQ=255)

                                                                           ccTGTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTggg              <  1:1830919/93‑1 (MQ=255)

                                                                            ctttCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGa             <  2:1267463/90‑1 (MQ=255)

                                                                            cTGTCTTGGACACACCTGGCCCGTTTTCTTCTGATTTAAAGGAGGGAAAAGCGTTGCTACCGCTTTTGGTGGCATCTCCCCCATtgggtgggt             >  1:4569285/1‑92 (MQ=255)

                                                                              gTCTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGAtc           <  2:1682095/93‑1 (MQ=255)

                                                                                cTTGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGAtctc         <  2:4136596/93‑1 (MQ=255)

                                                                                 ttGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGATCTCa        >  2:3670452/1‑93 (MQ=255)

                                                                                  tGGACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGATCTCAc       >  2:786551/1‑93 (MQ=255)

                                                                                   ggACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGATCTCAcc      >  2:2924531/1‑93 (MQ=255)

                                                                                    gACACACCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGATCTCACCg     <  2:2145121/93‑1 (MQ=255)

                                                                                     acacacCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGATCTCACCgg    <  1:3535216/93‑1 (MQ=255)

                                                                                      cacaCCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGATCTCACCGGa   >  2:4052269/1‑93 (MQ=255)

                                                                                       acacCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGATCTCACCGGAg  >  1:670723/1‑93 (MQ=255)

                                                                                       acacCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGATCTCACCGGAg  <  1:5398358/93‑1 (MQ=255)

AAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGATCTCACCGGAG  >  NC_000913/3202528‑3202707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`