Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,253,781 T→C E171G (GAG→GGG)  yhaNM ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,253,7810TC100.0% 633.1 / NA 197E171G (GAG→GGG) yhaNMhypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (103/94);  total (103/94)

Only 100 of 202 total aligned reads displayed.

TCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACAC  >  NC_000913/3253691‑3253870
                                                                                          |                                                                                         
tCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTg                                                                                        >  1:1952273/1‑93 (MQ=255)
tCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTg                                                                                        >  1:205852/1‑93 (MQ=255)
tCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTg                                                                                        <  2:647102/93‑1 (MQ=255)
 cgccgcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGc                                                                                       >  2:4641278/1‑93 (MQ=255)
  gccgcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGcc                                                                                      >  2:2859008/1‑93 (MQ=255)
   ccgcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCca                                                                                     <  2:471907/93‑1 (MQ=255)
    cgcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCcac                                                                                    <  2:426330/93‑1 (MQ=255)
    cgcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCcac                                                                                    >  2:1958927/1‑93 (MQ=255)
     gcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCcaca                                                                                   >  1:4057606/1‑93 (MQ=255)
     gcAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCcaca                                                                                   <  1:4091156/93‑1 (MQ=255)
       aaaCGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCcacaca                                                                                 >  1:347532/1‑93 (MQ=255)
       aaaCGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCcacaca                                                                                 >  1:3762262/1‑93 (MQ=255)
       aaaCGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCcacaca                                                                                 <  1:6471021/93‑1 (MQ=255)
       aaaCGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCcacaca                                                                                 <  2:5507690/93‑1 (MQ=255)
       aaaCGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCcacaca                                                                                 >  1:2273773/1‑93 (MQ=255)
        aaCGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCacacac                                                                                >  1:3935895/1‑93 (MQ=255)
        aaCGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCacacac                                                                                >  1:6099698/1‑93 (MQ=255)
           gggACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGcc                                                                             >  2:3505531/1‑93 (MQ=255)
           gggACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGcc                                                                             <  1:439661/93‑1 (MQ=255)
            ggACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCct                                                                            >  2:1239841/1‑93 (MQ=255)
            ggACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCct                                                                            >  2:1572743/1‑93 (MQ=255)
              aCTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCctgc                                                                          <  1:3953244/93‑1 (MQ=255)
               cTTCATTGAGGAACTGCAGGATCTCAGCAAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTGGCTCGCCCCCTGCCACACACGCctgct                                                                         <  2:4045191/93‑1 (MQ=255)
               cTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCctgct                                                                         <  2:6207244/93‑1 (MQ=255)
               cTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCctgct                                                                         <  1:996526/93‑1 (MQ=255)
               cTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCctgct                                                                         <  2:5105987/93‑1 (MQ=255)
                ttCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCctgctg                                                                        >  2:4008711/1‑93 (MQ=255)
                 tCATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTgg                                                                       <  1:682320/93‑1 (MQ=255)
                  cATTGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTggg                                                                      >  1:4442219/1‑93 (MQ=255)
                    ttGACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTa                                                                    >  1:636375/1‑93 (MQ=255)
                      gACGAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTaaa                                                                  >  1:3288946/1‑93 (MQ=255)
                         gAACTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAacac                                                               >  2:4570359/1‑93 (MQ=255)
                            cTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAacaccac                                                            <  2:4874746/93‑1 (MQ=255)
                            cTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAacaccac                                                            >  1:4230408/1‑93 (MQ=255)
                            cTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAacaccac                                                            <  2:3804611/93‑1 (MQ=255)
                            cTTCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAAACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAacaccac                                                            <  2:5741342/93‑1 (MQ=255)
                             ttCAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAacaccaca                                                           >  2:5954220/1‑93 (MQ=255)
                               cAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAacaccacacc                                                         >  2:831664/1‑93 (MQ=255)
                               cAGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAacaccacacc                                                         <  1:3711017/93‑1 (MQ=255)
                                aGGATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAAcaccacacca                                                        <  2:6615423/93‑1 (MQ=255)
                                 ggATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCAt                                                       >  1:145726/1‑93 (MQ=255)
                                 ggATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCAt                                                       <  1:2409322/93‑1 (MQ=255)
                                 ggATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCAt                                                       >  1:5878913/1‑93 (MQ=255)
                                  gATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATc                                                      <  2:5991561/93‑1 (MQ=255)
                                  gATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATc                                                      >  2:2993255/1‑93 (MQ=255)
                                  gATCTCAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATc                                                      <  1:5563753/93‑1 (MQ=255)
                                    tctcAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGt                                                    >  1:1426569/1‑93 (MQ=255)
                                    tctcAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGt                                                    <  2:936526/93‑1 (MQ=255)
                                     ctcAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCGTGCTCGCCCCCTGCCACACACGCCTGCTGGGGAAACACCACACCATCGTg                                                   >  2:3555592/1‑93 (MQ=255)
                                      tcAGCCAGCGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGc                                                  <  2:1856605/93‑1 (MQ=255)
                                       cagccagcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCg                                                 <  1:2096061/93‑1 (MQ=255)
                                        agccagcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGt                                                >  2:2443105/1‑93 (MQ=255)
                                         gccagcGTCGTGCTGGAAAGCCCCGTCAGCGGAGACGCTCGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGtc                                               <  2:3218709/93‑1 (MQ=255)
                                          ccagcGTCGTTCTGGAAAGCACCGTCAGCGGAGGCTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGtct                                              <  2:1139482/93‑1 (MQ=255)
                                           cagcGTCGTTCTGGAAAGCCCCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACCCCACACCATCGTGCGtctc                                             <  2:2601462/93‑1 (MQ=255)
                                           cagcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGtctc                                             <  2:6315775/93‑1 (MQ=255)
                                           cagcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGtctc                                             >  2:675052/1‑93 (MQ=255)
                                            agcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCg                                            <  1:4343223/93‑1 (MQ=255)
                                            agcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCg                                            >  1:5987159/1‑93 (MQ=255)
                                             gcGTCGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGa                                           >  1:5803067/1‑93 (MQ=255)
                                                gtcgTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGata                                         >  1:5129234/4‑93 (MQ=255)
                                                gtcgTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGata                                         <  1:4155767/90‑1 (MQ=255)
                                                gtcgTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGGGCGTCTCGata                                         >  1:3025323/4‑93 (MQ=255)
                                                 tcgTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGatat                                        <  2:5206885/91‑1 (MQ=255)
                                                 tcgTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGatat                                        >  2:3459028/3‑93 (MQ=255)
                                                     tCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGcac                                    <  2:411835/93‑1 (MQ=255)
                                                     tCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGcac                                    >  1:75040/1‑93 (MQ=255)
                                                       tGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACaa                                  >  1:1051642/1‑93 (MQ=255)
                                                          aaaGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGt                               <  1:3190025/93‑1 (MQ=255)
                                                           aaGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGtt                              >  2:3617431/1‑93 (MQ=255)
                                                           aaGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGtt                              >  1:3615441/1‑93 (MQ=255)
                                                            aGCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTg                             >  2:6052684/1‑93 (MQ=255)
                                                             gCACCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTgg                            <  1:2667043/93‑1 (MQ=255)
                                                               cccGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTa                          <  2:2150199/92‑1 (MQ=255)
                                                               aCCGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTa                          >  1:2771169/1‑93 (MQ=255)
                                                                ccGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTAt                         <  2:5932670/93‑1 (MQ=255)
                                                                ccGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTAt                         <  2:5372785/93‑1 (MQ=255)
                                                                ccGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTAt                         <  2:1424579/93‑1 (MQ=255)
                                                                ccGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTAt                         <  2:1011211/93‑1 (MQ=255)
                                                                ccGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTAt                         <  2:1163765/93‑1 (MQ=255)
                                                                ccGTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTAt                         <  2:2325603/93‑1 (MQ=255)
                                                                  gTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGc                       >  1:1893933/1‑93 (MQ=255)
                                                                  gTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGc                       <  2:1915615/93‑1 (MQ=255)
                                                                  gTCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGc                       >  2:1494628/1‑93 (MQ=255)
                                                                   tCAGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGcc                      >  1:1315284/1‑93 (MQ=255)
                                                                     aGCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCccg                    >  2:5572601/1‑93 (MQ=255)
                                                                      gCGGAGACTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCccgc                   <  2:5659368/93‑1 (MQ=255)
                                                                         gagaCTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCcga                <  1:3372146/93‑1 (MQ=255)
                                                                          agaCTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCcgac               >  2:4469403/1‑93 (MQ=255)
                                                                          agaCTCTTGCTCGCCCCCGGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCcgac               <  1:382352/93‑1 (MQ=255)
                                                                           gaCTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCcgacg              >  1:2497986/1‑93 (MQ=255)
                                                                            aCTCTTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCcgacga             >  2:438821/1‑93 (MQ=255)
                                                                             ctctTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGAt            >  2:5886848/1‑93 (MQ=255)
                                                                             ctctTGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGAt            >  2:4548795/1‑93 (MQ=255)
                                                                                ttGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGt         <  1:4908871/93‑1 (MQ=255)
                                                                                ttGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGt         <  1:3507726/93‑1 (MQ=255)
                                                                                ttGCTCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATATTGGTATGCCCGCCGACGATGGt         >  2:6266564/1‑93 (MQ=255)
                                                                                    tCGCCCCCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGaca     >  1:4812053/1‑93 (MQ=255)
                                                                                     cGCCCCCTGCCACACACGCATGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGacac    >  1:6570234/1‑93 (MQ=255)
                                                                                       ccccCTGCCACACCCGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGacacac  <  2:5315692/93‑1 (MQ=255)
                                                                                          |                                                                                         
TCGCCGCAAACGGGACTTCATTGACGAACTTCAGGATCTCAGCCAGCGTCGGTTCTGGAAAGCACCGTCAGCGGAGACTCTTGCTCGCCCTCTGCCACACACGCCTGCTGGGTAAACACCACACCATCGTGCGTCTCGATATGCACAATGTTGGTATGCCCGCCGACGATGGTGACACAC  >  NC_000913/3253691‑3253870

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: