BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,286,677	A→G	T75A (ACT→GCT)	yraJ →	putative outer membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,286,677	0	A	G	100.0%	1033.9 / NA	313	T75A (ACT→GCT)	yraJ	putative outer membrane protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (144/169); total (144/169)

Only 100 of 316 total aligned reads displayed.

TTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAACTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCA  >  NC_000913/3286587‑3286766

 tCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCtt                                                                                        >  2:5550096/1‑93 (MQ=255)

 tCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCtt                                                                                        >  1:1718604/1‑93 (MQ=255)

  cGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTa                                                                                       <  1:4366983/93‑1 (MQ=255)

      cccATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAg                                                                                   <  2:5749818/93‑1 (MQ=255)

      cccATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAg                                                                                   >  2:1068833/1‑93 (MQ=255)

      cccATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAg                                                                                   <  1:4766038/93‑1 (MQ=255)

       ccATTATGCTGGAAACCACAAAAAGTGGTATGCAAACATCCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAgg                                                                                  <  1:4229964/93‑1 (MQ=255)

        cATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGt                                                                                 >  2:5659971/1‑93 (MQ=255)

        cATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGt                                                                                 <  2:3536699/93‑1 (MQ=255)

         aTTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGtt                                                                                <  2:6487253/93‑1 (MQ=255)

         aTTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGtt                                                                                <  1:6607271/93‑1 (MQ=255)

         aTTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGtt                                                                                >  1:3659668/1‑93 (MQ=255)

          ttATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTg                                                                               >  2:5461871/1‑93 (MQ=255)

           tATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGa                                                                              <  2:3670424/93‑1 (MQ=255)

            aTGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGat                                                                             >  1:1220886/1‑93 (MQ=255)

               cTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATc                                                                          <  2:4046103/93‑1 (MQ=255)

               cTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATc                                                                          <  1:2740430/93‑1 (MQ=255)

                tGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCt                                                                         <  2:3114041/93‑1 (MQ=255)

                tGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCt                                                                         >  1:5922155/1‑93 (MQ=255)

                tGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCt                                                                         <  1:4652547/93‑1 (MQ=255)

                 ggAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTg                                                                        >  2:6386304/1‑93 (MQ=255)

                 ggAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTg                                                                        >  2:4841311/1‑93 (MQ=255)

                   aaaCCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGc                                                                      >  1:3457887/1‑93 (MQ=255)

                   aaaCCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGc                                                                      <  2:5094517/93‑1 (MQ=255)

                    aaCCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCt                                                                     >  1:6024524/1‑93 (MQ=255)

                    aaCCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCt                                                                     <  1:3980388/93‑1 (MQ=255)

                     aCCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTg                                                                    <  2:3259676/93‑1 (MQ=255)

                     aCCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTg                                                                    <  2:4626468/93‑1 (MQ=255)

                      ccACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGa                                                                   >  2:2928439/1‑93 (MQ=255)

                       cacaAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGaa                                                                  <  2:314050/93‑1 (MQ=255)

                           aaaaGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATaaa                                                              >  2:2084974/1‑93 (MQ=255)

                           aaaaGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATaaa                                                              >  2:6092838/1‑93 (MQ=255)

                           aaaaGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATaaa                                                              <  2:1988167/93‑1 (MQ=255)

                            aaaGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATaaaa                                                             <  2:6196034/93‑1 (MQ=255)

                            aaaGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATaaaa                                                             >  2:643489/1‑93 (MQ=255)

                             aaGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATaaaaa                                                            <  2:6007632/93‑1 (MQ=255)

                             aaGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATaaaaa                                                            >  1:3830195/1‑93 (MQ=255)

                              aGTTGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAaag                                                           <  2:6634643/93‑1 (MQ=255)

                              aGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAaag                                                           <  2:1541546/93‑1 (MQ=255)

                                tGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAaagaa                                                         <  1:3060832/93‑1 (MQ=255)

                                tGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAaagaa                                                         <  1:3322561/93‑1 (MQ=255)

                                tGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAaagaa                                                         <  1:2477226/93‑1 (MQ=255)

                                tGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGCTGATATCTGGCTGAATAAAaagaa                                                         >  1:3271572/1‑93 (MQ=255)

                                 ggTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAaagaag                                                        <  2:1457563/93‑1 (MQ=255)

                                 ggTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAaagaag                                                        <  1:5546411/93‑1 (MQ=255)

                                 ggTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAaagaag                                                        <  1:2297777/93‑1 (MQ=255)

                                 ggTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAaagaag                                                        >  2:5924238/1‑93 (MQ=255)

                                  gTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAgg                                                       <  1:6202643/93‑1 (MQ=255)

                                    aTGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGtt                                                     >  2:2168403/1‑93 (MQ=255)

                                     tGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGttt                                                    <  1:1890105/93‑1 (MQ=255)

                                      gCAAACATCCTATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTAGCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTc                                                   <  1:3338689/93‑1 (MQ=255)

                                      gCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTc                                                   <  1:5368969/93‑1 (MQ=255)

                                        aaaCAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTcac                                                 >  1:5953711/1‑93 (MQ=255)

                                         aacagcCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTcaca                                                <  2:701165/93‑1 (MQ=255)

                                         aacaacCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTcaca                                                <  1:5129770/93‑1 (MQ=255)

                                          acaacCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAg                                               >  2:1892376/1‑93 (MQ=255)

                                          acaacCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAg                                               >  1:5635769/1‑93 (MQ=255)

                                            aacCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGaa                                             >  1:4858441/1‑93 (MQ=255)

                                             acCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGaaa                                            <  2:1776352/93‑1 (MQ=255)

                                              ccGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGaaaa                                           >  2:2325486/1‑93 (MQ=255)

                                                 aTCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGaaaaaaa                                        <  2:3447205/93‑1 (MQ=255)

                                                 aTCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGaaaaaaa                                        <  1:3146447/93‑1 (MQ=255)

                                                 aTCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGaaaaaaa                                        >  2:2751850/1‑93 (MQ=255)

                                                 aTCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAAAAGGTTTCACAGaaaaaaa                                        <  1:6523827/93‑1 (MQ=255)

                                                  tCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAAt                                       >  1:1437939/1‑93 (MQ=255)

                                                  tCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAAt                                       <  2:3834252/93‑1 (MQ=255)

                                                       cgcgTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACAt                                  <  2:2989831/93‑1 (MQ=255)

                                                        gcgTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACAtt                                 >  2:4129290/1‑93 (MQ=255)

                                                         cgTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACAttt                                >  1:453/1‑93 (MQ=255)

                                                         cgTTTTTCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACAttt                                <  2:4436019/93‑1 (MQ=255)

                                                             tttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCg                            >  1:2532987/1‑93 (MQ=255)

                                                              ttCAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGc                           <  2:778847/93‑1 (MQ=255)

                                                                cAAAAAAATATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCa                         >  1:1460715/1‑93 (MQ=255)

                                                                 aaaaaaaTATGCACAACTGCCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTAACGGAAAAAAATTACATTTACCGCCaa                        <  1:6403682/93‑1 (MQ=255)

                                                                 aaaaaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCaa                        <  2:5408322/93‑1 (MQ=255)

                                                                  aaaaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAAt                       >  2:3019739/1‑93 (MQ=255)

                                                                  aaaaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAAt                       >  1:959889/1‑93 (MQ=255)

                                                                    aaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGc                     >  1:1022740/1‑93 (MQ=255)

                                                                    aaaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAAGTACATTTACCGCCAATGc                     <  1:6680245/93‑1 (MQ=255)

                                                                     aaaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCa                    <  1:3758870/93‑1 (MQ=255)

                                                                      aaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCag                   >  1:2468152/1‑93 (MQ=255)

                                                                      aaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCag                   >  1:4149173/1‑93 (MQ=255)

                                                                      aaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCag                   >  1:787775/1‑93 (MQ=255)

                                                                      aaTATGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCag                   >  1:92028/1‑93 (MQ=255)

                                                                       atatGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCaga                  <  2:4964636/93‑1 (MQ=255)

                                                                       atatGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCaga                  <  2:2583179/93‑1 (MQ=255)

                                                                         atGCACAACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGc                <  2:4205817/93‑1 (MQ=255)

                                                                            cacaACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAAc             <  1:6252065/93‑1 (MQ=255)

                                                                            cacaACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAAc             <  1:2699716/93‑1 (MQ=255)

                                                                              caACTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACtt           <  1:5215743/93‑1 (MQ=255)

                                                                               aaCTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTc          <  2:5362500/93‑1 (MQ=255)

                                                                               aaCTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTc          <  1:3497686/93‑1 (MQ=255)

                                                                               aaCTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTc          <  2:4584826/93‑1 (MQ=255)

                                                                               aaCTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTAACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTc          <  1:1607206/93‑1 (MQ=255)

                                                                                aCTACCAGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCt         >  1:2905754/1‑93 (MQ=255)

                                                                                    ccAGGAGCTTATTAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAGAAATTACATTTAGCGCCAATGCAGAGCAACTTCTGCAg     >  1:3520804/1‑93 (MQ=255)

                                                                                      aGGAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGcc   >  2:1307535/1‑93 (MQ=255)

                                                                                       ggAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCca  >  2:523572/1‑93 (MQ=255)

                                                                                       ggAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCca  >  2:1199971/1‑93 (MQ=255)

                                                                                       ggAGCTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCca  >  2:3977624/1‑93 (MQ=255)

TTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAACTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCA  >  NC_000913/3286587‑3286766

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`