BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,309,164	A→G	R54R (CGT→CGC)	rpsO ←	30S ribosomal subunit protein S15

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,309,164	0	A	G	100.0%	879.8 / NA	269	R54R (CGT→CGC)	rpsO	30S ribosomal subunit protein S15
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (120/149); total (120/149)

Only 100 of 282 total aligned reads displayed.

CGCTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCACGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTCGGT  >  NC_000913/3309075‑3309253

cgcTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCgcga                                                                                        <  2:2699176/93‑1 (MQ=255)

 gcTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCgcgac                                                                                       >  2:5937426/1‑93 (MQ=255)

 gcTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCgcgac                                                                                       <  2:3053990/93‑1 (MQ=255)

 gcTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCgcgac                                                                                       <  1:848068/93‑1 (MQ=255)

 gcTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCgcgac                                                                                       >  1:3117010/1‑93 (MQ=255)

   tCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACgg                                                                                     >  1:6045535/1‑93 (MQ=255)

   tCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACgg                                                                                     <  1:5923665/93‑1 (MQ=255)

      aTGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCtg                                                                                  >  2:4856799/1‑93 (MQ=255)

      aTGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCtg                                                                                  >  1:2777746/1‑93 (MQ=255)

       tGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCtgt                                                                                 <  2:2825703/93‑1 (MQ=255)

       tGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCtgt                                                                                 <  1:3710522/93‑1 (MQ=255)

       tGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCtgg                                                                                 >  1:1543365/1‑92 (MQ=255)

        gAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCtgtg                                                                                <  1:1087916/93‑1 (MQ=255)

        gAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCtgtg                                                                                <  2:3467564/93‑1 (MQ=255)

          gCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTgtggt                                                                              >  2:833782/1‑93 (MQ=255)

          gCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTgtggt                                                                              <  2:6674223/93‑1 (MQ=255)

          gCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTgtggt                                                                              <  1:5568286/93‑1 (MQ=255)

          gCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTgtggt                                                                              <  1:2739525/93‑1 (MQ=255)

          gCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTgtggt                                                                              <  1:4280823/93‑1 (MQ=255)

           cTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTgtggtg                                                                             <  2:1484246/93‑1 (MQ=255)

            tGGGTGTAACGTGCTACGTCTTTACGTTTCAGGCAGTCGAGCGGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGa                                                                            >  2:3572502/1‑93 (MQ=255)

               gtgtAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCt                                                                         <  1:3342335/93‑1 (MQ=255)

               gtgtAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCt                                                                         >  1:5729480/1‑93 (MQ=255)

               gtgtAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCt                                                                         <  1:3924841/93‑1 (MQ=255)

                  tAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCtttt                                                                      <  2:1405534/93‑1 (MQ=255)

                   aaCGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCttttt                                                                     >  1:4941608/1‑93 (MQ=255)

                      gTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTtgt                                                                  <  1:3546643/93‑1 (MQ=255)

                        gCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGc                                                                <  2:4715990/93‑1 (MQ=255)

                         cTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGct                                                               <  1:198605/93‑1 (MQ=255)

                         cTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGct                                                               <  2:1147014/93‑1 (MQ=255)

                          tACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGctc                                                              <  2:2441189/93‑1 (MQ=255)

                          tACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGctc                                                              >  1:6673851/1‑93 (MQ=255)

                           aCGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTTGTGATCTTTTTTGTGctct                                                             <  1:6519819/93‑1 (MQ=255)

                           aCGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGctct                                                             <  2:2495814/93‑1 (MQ=255)

                            cGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTg                                                            <  2:1874595/93‑1 (MQ=255)

                             gTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGc                                                           >  2:3247654/1‑93 (MQ=255)

                             gTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGc                                                           <  2:5245928/93‑1 (MQ=255)

                              tCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCa                                                          >  2:1084921/1‑93 (MQ=255)

                              tCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCa                                                          >  1:2326581/1‑93 (MQ=255)

                                tttACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCaaa                                                        >  1:2960736/1‑93 (MQ=255)

                                tttACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCaaa                                                        <  2:6200660/93‑1 (MQ=255)

                                 ttACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAg                                                       <  1:6142408/93‑1 (MQ=255)

                                   aCGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTg                                                     >  2:1032566/1‑93 (MQ=255)

                                     gTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGc                                                   >  1:2021793/1‑93 (MQ=255)

                                     gTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGc                                                   <  2:2667520/93‑1 (MQ=255)

                                      tttCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGcc                                                  <  1:3811072/93‑1 (MQ=255)

                                       ttCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGccc                                                 >  1:3285001/1‑93 (MQ=255)

                                       ttCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGccc                                                 <  2:637077/93‑1 (MQ=255)

                                        tCAGGTAGTAGAGGAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCt                                                <  2:939023/93‑1 (MQ=255)

                                         cAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTg                                               <  1:5076224/93‑1 (MQ=255)

                                          aGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGc                                              >  1:1002692/1‑93 (MQ=255)

                                           ggTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCa                                             >  2:4344772/1‑93 (MQ=255)

                                              aGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAggt                                          >  2:2882677/1‑93 (MQ=255)

                                               gTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGTCCTGCAggtg                                         <  1:4073763/93‑1 (MQ=255)

                                               gTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAggtg                                         <  1:5383764/93‑1 (MQ=255)

                                                tCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAggtgg                                        <  1:4620003/93‑1 (MQ=255)

                                                 cGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAggtggt                                       <  2:5091404/93‑1 (MQ=255)

                                                 cGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAggtggt                                       <  1:6404646/93‑1 (MQ=255)

                                                  gAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTCGCCCTGCCGGTGGtt                                      <  1:5258998/93‑1 (MQ=255)

                                                    gCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGa                                    <  2:2100598/93‑1 (MQ=255)

                                                      aGTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATc                                  >  1:3033600/1‑93 (MQ=255)

                                                       gTTTACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCt                                 <  1:2629614/93‑1 (MQ=255)

                                                        tttACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGGGGTTGATCtg                                >  2:2374392/1‑93 (MQ=255)

                                                         ttACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCtgt                               <  2:3606223/93‑1 (MQ=255)

                                                         ttACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCtgt                               <  2:1744463/93‑1 (MQ=255)

                                                          tACGACGCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCtgtg                              >  1:62642/1‑93 (MQ=255)

                                                              acgCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGt                          <  2:227112/93‑1 (MQ=255)

                                                              acgCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGt                          >  1:1619383/1‑93 (MQ=255)

                                                              acgCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGt                          <  2:5800029/93‑1 (MQ=255)

                                                               cgCTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTc                         >  2:4174700/1‑93 (MQ=255)

                                                                 cTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTcag                       <  2:4417432/93‑1 (MQ=255)

                                                                 cTGAGAAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTaag                       >  2:6224050/1‑93 (MQ=255)

                                                                   gagaAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTcagca                     <  1:5995662/93‑1 (MQ=255)

                                                                     gaAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGt                   >  1:4818744/1‑93 (MQ=255)

                                                                     gaAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGt                   <  2:3853698/93‑1 (MQ=255)

                                                                     gaAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGt                   >  1:5848664/1‑93 (MQ=255)

                                                                     gaAACCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGt                   <  1:1385131/93‑1 (MQ=255)

                                                                       aaCCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATTTGTGCAGTCAGCAGTGc                 >  1:979626/1‑93 (MQ=255)

                                                                        aCCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCt                >  1:2153394/1‑93 (MQ=255)

                                                                        aCCATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCt                >  2:5338852/1‑93 (MQ=255)

                                                                         ccATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTa               <  2:1335779/93‑1 (MQ=255)

                                                                          cATGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTAc              <  2:3420847/93‑1 (MQ=255)

                                                                           aTGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTAcc             <  1:5044068/93‑1 (MQ=255)

                                                                           aTGCGCAGCAGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTAcc             >  2:4089923/1‑93 (MQ=255)

                                                                               gcagcaGACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGaa         >  2:4732398/1‑93 (MQ=255)

                                                                                cagcagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAAc        <  2:1645067/93‑1 (MQ=255)

                                                                                cagcagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAAc        <  2:3951280/93‑1 (MQ=255)

                                                                                 agcagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACt       <  1:3496090/93‑1 (MQ=255)

                                                                                 agcagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACt       >  1:5684855/1‑93 (MQ=255)

                                                                                 agcagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACt       >  1:765163/1‑93 (MQ=255)

                                                                                  gcagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACtt      <  2:3014051/93‑1 (MQ=255)

                                                                                   cagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTc     <  1:3444127/93‑1 (MQ=255)

                                                                                   cagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTc     <  2:198068/93‑1 (MQ=255)

                                                                                   cagACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTc     >  2:13263/1‑93 (MQ=255)

                                                                                    agACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTCg    <  1:4387680/93‑1 (MQ=255)

                                                                                     gACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTCgg   <  1:634035/93‑1 (MQ=255)

                                                                                     gACCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTCgg   >  1:4700215/1‑93 (MQ=255)

                                                                                      aCCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTCGGt  >  2:6461992/1‑93 (MQ=255)

                                                                                      aCCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTCGGt  <  1:2507407/93‑1 (MQ=255)

                                                                                      aCCGCGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTCGGt  <  1:5486291/93‑1 (MQ=255)

CGCTCGATGAGCTGGGTGTAACGTGCTACGTCTTTACGTTTCAGGTAGTCGAGCAGTTTACGACGCTGAGAAACCATGCGCAGCAGACCACGACGGCTGTGGTGATCTTTTTTGTGCTCTGCAAAGTGGCCCTGCAGGTGGTTGATCTGTGCAGTCAGCAGTGCTACCTGAACTTCGGT  >  NC_000913/3309075‑3309253

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`