BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,316,316	T→C	R13R (CGT→CGC)	argG →	argininosuccinate synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,316,316	0	T	C	100.0%	838.8 / NA	253	R13R (CGT→CGC)	argG	argininosuccinate synthetase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (117/136); total (117/136)

Only 100 of 255 total aligned reads displayed.

TGAGAGCGGAAATCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGTATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGC  >  NC_000913/3316226‑3316405

 gagaGCGGAAATCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCAtt                                                                                        <  1:1370522/93‑1 (MQ=255)

 gagaGCGGAAATCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCAtt                                                                                        <  2:4975542/93‑1 (MQ=255)

 gagaGCGGAAATCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCAtt                                                                                        <  2:4456245/93‑1 (MQ=255)

   gagCGGAAATCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTgg                                                                                      >  1:4777129/1‑93 (MQ=255)

     gCGGAAATCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTa                                                                                    <  2:5287995/93‑1 (MQ=255)

      cGGAAATCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGCCGACGATTCTCAAGCATCTCCCGGTAGGTACACGCATTGGTag                                                                                   >  1:6135020/1‑92 (MQ=255)

       ggAAATCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATc                                                                                  >  1:1464101/1‑93 (MQ=255)

       ggAAATCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATc                                                                                  <  2:2352305/93‑1 (MQ=255)

          aaTCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCt                                                                               <  2:5976880/93‑1 (MQ=255)

          aaTCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCt                                                                               <  2:1074958/93‑1 (MQ=255)

           aTCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCtt                                                                              <  1:438059/93‑1 (MQ=255)

            tCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCttt                                                                             <  1:3395541/93‑1 (MQ=255)

                ggCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCt                                                                         >  2:2747887/1‑93 (MQ=255)

                 gCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTg                                                                        <  1:592789/93‑1 (MQ=255)

                   tcatcatcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGc                                                                      >  1:5431736/1‑93 (MQ=255)

                    catcatcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCg                                                                     <  2:1116115/93‑1 (MQ=255)

                    catcatcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCg                                                                     >  1:4820525/1‑93 (MQ=255)

                    catcatcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCg                                                                     >  2:1521857/1‑93 (MQ=255)

                     atcatcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCgg                                                                    <  1:3726765/93‑1 (MQ=255)

                      tcatcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGt                                                                   >  2:1157885/1‑93 (MQ=255)

                       catcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTc                                                                  <  1:2616910/93‑1 (MQ=255)

                       catcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTc                                                                  <  2:2656752/93‑1 (MQ=255)

                       catcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTc                                                                  <  1:5376109/93‑1 (MQ=255)

                       catcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTc                                                                  <  2:3189819/93‑1 (MQ=255)

                        atcaGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCt                                                                 <  1:2549761/93‑1 (MQ=255)

                            gTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGac                                                             >  2:437649/1‑93 (MQ=255)

                              taattaaGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGacac                                                           >  1:3960084/1‑93 (MQ=255)

                              taattaaGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGacac                                                           >  1:183065/1‑93 (MQ=255)

                                attaaGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCa                                                         >  2:6430394/1‑93 (MQ=255)

                                  taaGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGt                                                       <  1:1990843/93‑1 (MQ=255)

                                    aGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGc                                                     >  2:2783189/1‑93 (MQ=255)

                                     gCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGcc                                                    >  1:3639233/1‑93 (MQ=255)

                                        gggTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCa                                                 >  2:5179639/1‑93 (MQ=255)

                                        gggTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCa                                                 >  1:4100448/1‑93 (MQ=255)

                                        gggTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCa                                                 >  1:682283/1‑93 (MQ=255)

                                         ggTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCAc                                                >  1:6218390/1‑93 (MQ=255)

                                         ggTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCAc                                                <  2:4004876/93‑1 (MQ=255)

                                          gtgtTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCAct                                               <  2:4235100/93‑1 (MQ=255)

                                           tgtTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCActg                                              >  1:5985739/1‑93 (MQ=255)

                                           tgtTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCActg                                              >  2:3651423/1‑93 (MQ=255)

                                           tgtTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCActg                                              <  2:5160439/93‑1 (MQ=255)

                                            gtTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCActgc                                             <  2:5834929/93‑1 (MQ=255)

                                             ttATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCActgct                                            <  2:6625784/93‑1 (MQ=255)

                                             ttATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCActgct                                            >  1:740974/1‑93 (MQ=255)

                                             ttATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCActgct                                            <  2:4664366/93‑1 (MQ=255)

                                             ttATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCActgct                                            >  2:2535678/1‑93 (MQ=255)

                                               aTTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCtgt                                          <  1:5491439/93‑1 (MQ=255)

                                               aTTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCtgt                                          <  1:2832760/93‑1 (MQ=255)

                                               aTTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCtgt                                          <  2:1401311/93‑1 (MQ=255)

                                               aTTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAAAGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCtgt                                          >  1:4526438/1‑93 (MQ=255)

                                                ttttATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCtgtg                                         <  1:6054729/93‑1 (MQ=255)

                                                   tATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGAt                                      <  1:1574790/93‑1 (MQ=255)

                                                   tATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGAt                                      <  2:3805384/93‑1 (MQ=255)

                                                    aTGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATg                                     >  2:3094924/1‑93 (MQ=255)

                                                    aTGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATg                                     <  1:1849014/93‑1 (MQ=255)

                                                    aTGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATg                                     <  2:2901997/93‑1 (MQ=255)

                                                     tGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGc                                    <  2:5283337/93‑1 (MQ=255)

                                                      gacgacGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCg                                   <  1:5246660/93‑1 (MQ=255)

                                                      gacgacGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCg                                   <  1:2105903/93‑1 (MQ=255)

                                                      gacgacGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCg                                   >  2:2260528/1‑93 (MQ=255)

                                                      gacgacGATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCg                                   >  2:2188538/1‑93 (MQ=255)

                                                       acgacgATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGa                                  >  1:1228448/1‑93 (MQ=255)

                                                       acgacgATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGa                                  >  2:3282436/1‑93 (MQ=255)

                                                       acgacgATTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGa                                  <  2:4552133/93‑1 (MQ=255)

                                                          acgaTTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACaa                               >  2:5551417/1‑93 (MQ=255)

                                                          acgaTTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACaa                               >  2:3566972/1‑93 (MQ=255)

                                                            gaTTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACaaaa                             >  1:4719530/1‑93 (MQ=255)

                                                             aTTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAg                            <  2:6095332/93‑1 (MQ=255)

                                                             aTTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAg                            >  2:6407495/1‑93 (MQ=255)

                                                             aTTCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAg                            <  1:6499926/93‑1 (MQ=255)

                                                              ttCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCTCACTGCTGTGGATGCGACAAAAgg                           <  2:5763945/93‑1 (MQ=255)

                                                              ttCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAgg                           >  2:4709673/1‑93 (MQ=255)

                                                              ttCTCAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAgg                           <  1:2948920/93‑1 (MQ=255)

                                                               tctcAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTTGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAggg                          >  1:876112/1‑93 (MQ=255)

                                                               tctcAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAggg                          <  2:716859/93‑1 (MQ=255)

                                                               tctcAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAggg                          <  1:3884368/93‑1 (MQ=255)

                                                                 tcAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAg                        <  2:5846633/93‑1 (MQ=255)

                                                                 tcAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAg                        <  2:4732075/93‑1 (MQ=255)

                                                                 tcAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAg                        <  2:2609665/93‑1 (MQ=255)

                                                                 tcAAGCATCTCCCGGTAGGTCAACGCATTGGTATCGATTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAg                        >  2:1359761/1‑93 (MQ=255)

                                                                    aGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCgg                     >  1:6388976/1‑93 (MQ=255)

                                                                    aGCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCgg                     <  2:5070443/93‑1 (MQ=255)

                                                                     gCATCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGt                    <  2:3957575/93‑1 (MQ=255)

                                                                       aTCTCCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTc                  >  2:1770911/1‑93 (MQ=255)

                                                                        tctcCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGCGCGGTTcc                 <  1:6525113/93‑1 (MQ=255)

                                                                        tctcCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTcc                 >  2:2941652/1‑93 (MQ=255)

                                                                         ctcCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCt                >  1:2686583/1‑93 (MQ=255)

                                                                         ctcCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCt                <  2:6313333/93‑1 (MQ=255)

                                                                          tcCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCtt               >  2:2046908/1‑93 (MQ=255)

                                                                          tcCCGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCtt               >  1:5756750/1‑93 (MQ=255)

                                                                           cccGGTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTa              <  1:3475479/93‑1 (MQ=255)

                                                                               gTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCa          <  2:657811/93‑1 (MQ=255)

                                                                               gTAGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCa          >  1:4233104/1‑93 (MQ=255)

                                                                                 aGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCata        >  1:4917653/1‑93 (MQ=255)

                                                                                 aGGTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCata        <  2:625604/93‑1 (MQ=255)

                                                                                   gTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCAtata      <  1:6046997/93‑1 (MQ=255)

                                                                                   gTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCAtata      <  2:6158726/93‑1 (MQ=255)

                                                                                   gTCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCAtata      >  1:5691028/1‑93 (MQ=255)

                                                                                    tCAACGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATAc     <  2:335447/93‑1 (MQ=255)

                                                                                       aCGCATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGc  >  2:1886120/1‑93 (MQ=255)

TGAGAGCGGAAATCCAGGCTCATCATCAGTTAATTAAGCAGGGTGTTATTTTATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGTATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGC  >  NC_000913/3316226‑3316405

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`