BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,352,410	C→T	I48I (ATC→ATT)	gltB →	glutamate synthase large subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,352,410	0	C	T	100.0%	1011.8 / NA	270	I48I (ATC→ATT)	gltB	glutamate synthase large subunit
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (137/133); total (137/133)

Only 100 of 273 total aligned reads displayed.

GGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCG  >  NC_000913/3352320‑3352498

ggAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGc                                                                                        >  1:3691811/1‑93 (MQ=255)

ggAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGc                                                                                        <  1:2290955/93‑1 (MQ=255)

  gaGTGGGGTTCCCGCAGGGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGccc                                                                                      <  1:2764410/92‑1 (MQ=255)

   aGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCca                                                                                     >  2:2904064/1‑93 (MQ=255)

    gTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCcac                                                                                    <  2:2943792/93‑1 (MQ=255)

    gTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCcac                                                                                    >  2:2557407/1‑93 (MQ=255)

     tGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCcaca                                                                                   <  2:4134141/93‑1 (MQ=255)

      ggggTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACAt                                                                                  <  2:655315/93‑1 (MQ=255)

      ggggTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACAt                                                                                  <  1:3210793/93‑1 (MQ=255)

      ggggTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACAt                                                                                  >  1:810807/1‑93 (MQ=255)

       gggTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATa                                                                                 <  1:1061823/93‑1 (MQ=255)

         gTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGa                                                                               >  2:2599741/1‑93 (MQ=255)

         gTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGa                                                                               <  2:4953659/93‑1 (MQ=255)

          ttCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGaa                                                                              <  1:6259602/93‑1 (MQ=255)

           tCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAg                                                                             <  2:1987260/93‑1 (MQ=255)

             ccGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGc                                                                           <  1:5108338/93‑1 (MQ=255)

              cGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCg                                                                          >  1:1416008/1‑93 (MQ=255)

                 agagCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAc                                                                       >  1:1120477/1‑93 (MQ=255)

                 agagCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAc                                                                       >  1:2145713/1‑93 (MQ=255)

                  gagCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAcc                                                                      >  2:3751948/1‑93 (MQ=255)

                  gagCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAAcc                                                                      >  2:3939733/1‑93 (MQ=255)

                    gCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTa                                                                    >  2:4376732/1‑93 (MQ=255)

                       tGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGcc                                                                 <  1:5223329/93‑1 (MQ=255)

                       tGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGcc                                                                 >  2:2750057/1‑93 (MQ=255)

                       cgggggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGcc                                                                 <  2:5489040/92‑1 (MQ=255)

                        gggggTGGTTCACGATATGTTGTACGATAAATCACTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCca                                                                >  1:6177433/1‑93 (MQ=255)

                        gggggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCca                                                                >  1:2022693/1‑93 (MQ=255)

                         ggggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCcac                                                               <  1:5451120/93‑1 (MQ=255)

                         ggggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCcac                                                               >  1:4673030/1‑93 (MQ=255)

                          gggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCcaca                                                              >  2:1783688/1‑93 (MQ=255)

                           ggAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACaa                                                             >  1:1477348/1‑93 (MQ=255)

                             aGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAgg                                                           >  1:776296/1‑93 (MQ=255)

                              ggTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGt                                                          >  1:5824947/1‑93 (MQ=255)

                              ggTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGt                                                          <  2:1655272/93‑1 (MQ=255)

                               gTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTa                                                         <  1:2956767/93‑1 (MQ=255)

                                ttCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAg                                                        <  2:2114599/93‑1 (MQ=255)

                                  cACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTg                                                      <  1:3755161/93‑1 (MQ=255)

                                  cACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTg                                                      >  2:2177819/1‑93 (MQ=255)

                                   aCGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGc                                                     >  1:4537464/1‑93 (MQ=255)

                                    cGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCg                                                    >  2:4513506/1‑93 (MQ=255)

                                    cGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCg                                                    >  2:1143902/1‑93 (MQ=255)

                                     gATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGt                                                   <  1:196571/93‑1 (MQ=255)

                                     gATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGt                                                   >  2:6465865/1‑93 (MQ=255)

                                     gATATGTTGAACGATAAATCCCTTGAGAGGGATAACTGTGGTTTAGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGt                                                   >  1:404802/1‑93 (MQ=255)

                                       tatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAc                                                 <  1:3823862/93‑1 (MQ=255)

                                       tatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAc                                                 <  2:2340735/93‑1 (MQ=255)

                                       tatGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTAc                                                 >  1:1245783/1‑93 (MQ=255)

                                        atGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACt                                                <  2:73468/93‑1 (MQ=255)

                                        atGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACt                                                >  2:3056123/1‑93 (MQ=255)

                                         tgttgtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGACCCTAGCCACAAGGTAGTGCGTACTg                                               <  2:6059448/93‑1 (MQ=255)

                                         tgttgtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTg                                               >  1:3168414/1‑93 (MQ=255)

                                          gttctACGATAAATCCCTCGAGAGGCATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGc                                              <  1:3882242/93‑1 (MQ=255)

                                            tgtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCaa                                            >  2:1500173/1‑93 (MQ=255)

                                            tgtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCaa                                            <  1:6039455/93‑1 (MQ=255)

                                            tgtACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCaa                                            >  2:1963968/1‑93 (MQ=255)

                                               aCGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATac                                         >  1:2756234/1‑93 (MQ=255)

                                                  aTAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACg                                      >  1:5094670/1‑93 (MQ=255)

                                                  aTAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACg                                      >  1:4507834/1‑93 (MQ=255)

                                                   tAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGc                                     >  1:888073/1‑93 (MQ=255)

                                                   tAAATCCCTTGAGAGGGATAACTGTGGTTTCAGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATCCACGc                                     >  1:1728584/1‑93 (MQ=255)

                                                    aaaTCCCTTGAGAGGGATAACTGTGGCTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCa                                    >  2:5147058/1‑93 (MQ=255)

                                                     aaTCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCAc                                   <  2:1800168/93‑1 (MQ=255)

                                                     aaTCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCAc                                   >  2:4794803/1‑93 (MQ=255)

                                                       tCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTg                                 >  1:2836512/1‑93 (MQ=255)

                                                       tCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTg                                 <  2:3955082/93‑1 (MQ=255)

                                                       tCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTg                                 >  2:1053854/1‑93 (MQ=255)

                                                        cccTTGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTgg                                >  2:2820294/1‑93 (MQ=255)

                                                           ttGAGAGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGccc                             >  1:1576359/1‑93 (MQ=255)

                                                             gagaGGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCACGc                           >  2:1411931/1‑93 (MQ=255)

                                                              agagGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCa                          <  2:2059580/93‑1 (MQ=255)

                                                               gagGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCAt                         <  2:4442595/93‑1 (MQ=255)

                                                               gagGGATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCAt                         <  1:6004875/93‑1 (MQ=255)

                                                                agGGATAACTGTGGTTTCGGCCTGATTGCCCGCATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATg                        >  2:5974126/1‑93 (MQ=255)

                                                                  ggATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgca                      <  2:2495235/93‑1 (MQ=255)

                                                                  ggATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgca                      >  2:1712545/1‑93 (MQ=255)

                                                                  ggATAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgca                      <  1:6085852/93‑1 (MQ=255)

                                                                     tAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgcagca                   >  1:250938/1‑93 (MQ=255)

                                                                     tAACTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATgcagca                   >  1:1767079/1‑93 (MQ=255)

                                                                      aaCTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCAc                  <  1:4288436/93‑1 (MQ=255)

                                                                        cTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCg                >  1:6628555/1‑93 (MQ=255)

                                                                        cTGTGGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTCCAATACACGCACTGGCCCGCATGCAGCACCg                <  2:5708190/93‑1 (MQ=255)

                                                                         tgtgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGt               >  2:6679881/1‑93 (MQ=255)

                                                                         tgtgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGt               >  2:4286409/1‑93 (MQ=255)

                                                                         tgtgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGt               <  2:3176979/93‑1 (MQ=255)

                                                                         tgtgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGt               <  1:4462251/93‑1 (MQ=255)

                                                                          gtgGTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTg              >  1:4096923/1‑93 (MQ=255)

                                                                             gTTTCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGgcg           >  1:708542/1‑93 (MQ=255)

                                                                              tttCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGgcgc          >  2:5549242/1‑93 (MQ=255)

                                                                               ttCGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGcgcg         <  1:4394286/93‑1 (MQ=255)

                                                                                 cGGCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGAt       <  1:1691387/93‑1 (MQ=255)

                                                                                  ggCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGAtt      <  1:54696/93‑1 (MQ=255)

                                                                                   gCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtc     >  2:5374358/1‑93 (MQ=255)

                                                                                   gCCTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtc     >  2:349862/1‑93 (MQ=255)

                                                                                    ccTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtct    >  2:2384859/1‑93 (MQ=255)

                                                                                    ccTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtct    <  1:5594595/93‑1 (MQ=255)

                                                                                     cTGATTGCCCCCATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtctc   <  2:625745/93‑1 (MQ=255)

                                                                                     cTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtctc   <  2:5880307/93‑1 (MQ=255)

                                                                                     cTGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATtctc   >  1:4821888/1‑93 (MQ=255)

                                                                                      tGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCg  >  1:6485769/1‑93 (MQ=255)

                                                                                      tGATTGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCg  >  2:497493/1‑93 (MQ=255)

GGAAGTGGGGTTCCCGCAGAGCCTGGGGGAGGTTCACGATATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCG  >  NC_000913/3352320‑3352498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`