BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,353,950	A→G	T562A (ACC→GCC)	gltB →	glutamate synthase large subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,353,950	0	A	G	100.0%	733.2 / NA	226	T562A (ACC→GCC)	gltB	glutamate synthase large subunit
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (104/122); total (104/122)

Only 100 of 246 total aligned reads displayed.

ATTATTTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCACCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACTCC  >  NC_000913/3353860‑3354039

attattTACGCCTACTTCCGCCAGCAGTTCGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCgccgcc                                                                                         <  1:2214752/93‑1 (MQ=255)

attattTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCgccgcc                                                                                         >  1:1287396/1‑93 (MQ=255)

 ttattTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGccgcca                                                                                        >  2:2498159/1‑93 (MQ=255)

  tattTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAg                                                                                       <  1:6583813/93‑1 (MQ=255)

   attTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGATCGCCGCCAga                                                                                      >  1:5269062/1‑92 (MQ=255)

        cGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCgg                                                                                 >  1:4322193/1‑93 (MQ=255)

         gACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGt                                                                                >  1:636941/1‑93 (MQ=255)

          actactTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTc                                                                               >  2:2732067/1‑93 (MQ=255)

              ctcccGCCAGCAGTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGa                                                                           <  1:6031059/90‑1 (MQ=255)

               ttCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGaa                                                                          >  1:6708628/1‑93 (MQ=255)

                tCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTTGTGaaa                                                                         >  1:6299235/1‑93 (MQ=255)

                tCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGaaa                                                                         >  1:4632522/1‑93 (MQ=255)

                  cGCCAGCAGTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATg                                                                       <  2:1768845/93‑1 (MQ=255)

                   cccAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGa                                                                      <  2:2618594/92‑1 (MQ=255)

                    ccAGCAGTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGaa                                                                     <  1:2816499/93‑1 (MQ=255)

                     cagaagTTTCCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAAc                                                                    <  1:2167387/93‑1 (MQ=255)

                      agcagTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACg                                                                   >  2:6428338/1‑93 (MQ=255)

                        cagTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTc                                                                 <  1:4184277/93‑1 (MQ=255)

                         agTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCt                                                                <  2:5172892/93‑1 (MQ=255)

                         agTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCt                                                                >  1:4811707/1‑93 (MQ=255)

                          gTTTGCCCAGGTGCCAACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCtt                                                               <  1:2346719/93‑1 (MQ=255)

                          gTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCtt                                                               <  2:3182782/93‑1 (MQ=255)

                          gTTCGCCCAGGTGCCTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCtt                                                               <  2:1131746/93‑1 (MQ=255)

                             tGCGCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTg                                                            <  1:5203062/93‑1 (MQ=255)

                              gCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGc                                                           >  2:1279233/1‑93 (MQ=255)

                                ccAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGa                                                         <  1:3887127/93‑1 (MQ=255)

                                 cAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGaa                                                        <  1:3757981/93‑1 (MQ=255)

                                 cAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGaa                                                        <  2:2770703/93‑1 (MQ=255)

                                 cAGGTGACAACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGaa                                                        <  1:5756628/93‑1 (MQ=255)

                                 cAGGTAACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGaa                                                        <  2:4096418/93‑1 (MQ=255)

                                   ggTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGc                                                      >  2:1648710/1‑93 (MQ=255)

                                   ggTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGc                                                      <  2:3216567/93‑1 (MQ=255)

                                    gTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCa                                                     <  2:1527453/93‑1 (MQ=255)

                                    gTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCa                                                     <  2:479656/93‑1 (MQ=255)

                                     tGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCCGTCGTGAAATGAACGTCTTTTGCGGAGCag                                                    >  1:6147127/1‑93 (MQ=255)

                                      gACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCaga                                                   <  2:358754/93‑1 (MQ=255)

                                       aCTACCCCGCCAATCGCCCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCagag                                                  <  2:542791/93‑1 (MQ=255)

                                       aCTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCagag                                                  <  2:4187155/93‑1 (MQ=255)

                                       aCTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCagag                                                  <  1:900175/93‑1 (MQ=255)

                                       aCTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCagag                                                  >  2:4549110/1‑93 (MQ=255)

                                        cTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAgg                                                 <  2:2865244/93‑1 (MQ=255)

                                        cTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAgg                                                 <  2:845898/93‑1 (MQ=255)

                                          aaCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGc                                               >  2:525716/1‑93 (MQ=255)

                                           aCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGCCTTTTGCGAAGCAGAGGGcc                                              >  1:3286100/1‑93 (MQ=255)

                                             ccGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAg                                            <  2:1890126/93‑1 (MQ=255)

                                                   aTCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCAc                                      >  2:3000305/1‑93 (MQ=255)

                                                   aTCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCAc                                      <  2:2812164/93‑1 (MQ=255)

                                                    tCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCAcc                                     <  1:2118932/93‑1 (MQ=255)

                                                      gACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGt                                   <  2:5608231/93‑1 (MQ=255)

                                                      gACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGt                                   <  2:603081/93‑1 (MQ=255)

                                                      gACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGt                                   <  2:3347415/93‑1 (MQ=255)

                                                      gACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGt                                   <  2:2391884/93‑1 (MQ=255)

                                                      gACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGt                                   <  2:1623240/93‑1 (MQ=255)

                                                       ccccGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGtt                                  <  2:2343437/92‑1 (MQ=255)

                                                       aCCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGtt                                  <  1:744693/93‑1 (MQ=255)

                                                        cccGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGttt                                 <  1:290089/93‑1 (MQ=255)

                                                        cccGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGttt                                 >  1:4011717/1‑93 (MQ=255)

                                                         ccGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTa                                <  1:3106926/93‑1 (MQ=255)

                                                            cggCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGc                             <  1:103024/91‑1 (MQ=255)

                                                              gCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCtt                           <  1:4502293/93‑1 (MQ=255)

                                                               cGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCttt                          <  1:1550034/93‑1 (MQ=255)

                                                                gTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTa                         <  1:3513444/93‑1 (MQ=255)

                                                                 tGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTaa                        >  1:2988107/1‑93 (MQ=255)

                                                                 tGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTaa                        <  1:5682181/93‑1 (MQ=255)

                                                                 tGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTaa                        >  2:2430013/1‑93 (MQ=255)

                                                                  gAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTaaa                       <  2:1714649/93‑1 (MQ=255)

                                                                  gAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTaaa                       >  2:660332/1‑93 (MQ=255)

                                                                  gAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTaaa                       <  1:3642259/93‑1 (MQ=255)

                                                                   aaGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAAt                      >  1:1884706/1‑93 (MQ=255)

                                                                   aaGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAAt                      <  2:1864000/93‑1 (MQ=255)

                                                                   aaGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAAt                      <  2:1026599/93‑1 (MQ=255)

                                                                   aaGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAAt                      >  2:2153537/1‑93 (MQ=255)

                                                                   aaGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGCTTAAGCTTTAAAt                      >  2:2021509/1‑93 (MQ=255)

                                                                   aaGAGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAAt                      >  1:5448493/1‑93 (MQ=255)

                                                                    aGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATc                     >  2:2281502/1‑93 (MQ=255)

                                                                     gcgcATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCg                    <  1:5165666/93‑1 (MQ=255)

                                                                      cgcATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGc                   <  1:5641327/93‑1 (MQ=255)

                                                                      cgcATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGc                   <  2:2253876/93‑1 (MQ=255)

                                                                        cATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCg                 >  2:5546456/1‑93 (MQ=255)

                                                                         aTGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGa                <  1:120353/93‑1 (MQ=255)

                                                                         aTGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGa                <  2:4134169/93‑1 (MQ=255)

                                                                          tGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGAt               <  1:5919321/93‑1 (MQ=255)

                                                                          tGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGACGAt               >  1:2623506/1‑93 (MQ=255)

                                                                            ttATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTc             <  1:5856629/93‑1 (MQ=255)

                                                                             tATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCt            <  2:3666638/93‑1 (MQ=255)

                                                                             tATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCt            <  1:4961614/93‑1 (MQ=255)

                                                                               tGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGc          <  2:5795345/93‑1 (MQ=255)

                                                                               tGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGc          <  1:4069550/93‑1 (MQ=255)

                                                                               tGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGc          <  2:48554/93‑1 (MQ=255)

                                                                               tGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGAGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGc          >  1:1147941/1‑93 (MQ=255)

                                                                                 tcgctcgcCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGctc        >  2:4452394/1‑93 (MQ=255)

                                                                                  cgctcgcCGCCAGTATCGGTCGTGAAATGACCGTCTTTTGCGAAGCAGAGCGCCAGGCGCCAAGTTTAAGCTTTAAATCGCCGATTCTGctct       <  2:3855801/93‑1 (MQ=255)

                                                                                  cgctcgcCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGctct       >  2:75473/1‑93 (MQ=255)

                                                                                  cgctcgcCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGctct       >  2:3047294/1‑93 (MQ=255)

                                                                                     tcgcCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACt    >  2:55818/1‑93 (MQ=255)

                                                                                     tcgcCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACt    >  2:5362864/1‑93 (MQ=255)

                                                                                     tcgcCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACt    >  2:4116285/1‑93 (MQ=255)

                                                                                     tcgcCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACt    <  2:3430240/93‑1 (MQ=255)

                                                                                       gccgccAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACTcc  <  1:5008591/93‑1 (MQ=255)

                                                                                       gccgccAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACTcc  >  1:66290/1‑93 (MQ=255)

ATTATTTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCACCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACTCC  >  NC_000913/3353860‑3354039

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`