Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,370,778 A→G V145A (GTA→GCA)  nanA ← N‑acetylneuraminate lyase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,370,7780AG99.7% 915.2 / NA 282V145A (GTA→GCA) nanAN‑acetylneuraminate lyase
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (162/119);  total (163/119)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 285 total aligned reads displayed.

TCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTACCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCA  >  NC_000913/3370688‑3370867
                                                                                          |                                                                                         
tCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGcc                                                                                         >  1:1236578/1‑93 (MQ=255)
tCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGcc                                                                                         >  2:5973116/1‑93 (MQ=255)
tCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGcc                                                                                         >  2:3062275/1‑93 (MQ=255)
  cATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGcctc                                                                                       >  2:3392857/1‑91 (MQ=255)
  cATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGcccc                                                                                       <  2:855472/93‑1 (MQ=255)
    tCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCAc                                                                                     >  1:5351592/1‑93 (MQ=255)
    tCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCAc                                                                                     <  1:5138243/93‑1 (MQ=255)
      tGATAGAGCTCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTc                                                                                   >  1:6517561/1‑93 (MQ=255)
      tGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTc                                                                                   >  1:5261439/1‑93 (MQ=255)
      tGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTc                                                                                   >  2:5279534/1‑93 (MQ=255)
      tGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTc                                                                                   >  1:2195097/1‑93 (MQ=255)
       gATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCACGGTCAGTTTTGCCCCACTCa                                                                                  >  2:4438274/1‑93 (MQ=255)
        aTAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAg                                                                                 <  2:1157978/93‑1 (MQ=255)
         tAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAgg                                                                                >  1:104385/1‑93 (MQ=255)
         tAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAgg                                                                                >  2:1567841/1‑93 (MQ=255)
          agagATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAggg                                                                               <  2:548287/93‑1 (MQ=255)
           gagaTCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGc                                                                              >  2:6522628/1‑93 (MQ=255)
           gagaTCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGc                                                                              >  1:3364585/1‑93 (MQ=255)
            agaTCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCt                                                                             <  1:3527251/93‑1 (MQ=255)
             gaTCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTg                                                                            <  1:4363017/93‑1 (MQ=255)
              aTCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTgg                                                                           >  1:1170842/1‑93 (MQ=255)
               tCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGa                                                                          >  2:3893079/1‑93 (MQ=255)
                cGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGaa                                                                         <  1:5869773/93‑1 (MQ=255)
                cGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGaa                                                                         <  2:4205544/93‑1 (MQ=255)
                cGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGaa                                                                         <  2:2108467/93‑1 (MQ=255)
                 gCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAt                                                                        <  2:4706833/93‑1 (MQ=255)
                 gCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAt                                                                        <  2:2283106/93‑1 (MQ=255)
                  ccAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAtg                                                                       >  1:2505804/1‑93 (MQ=255)
                   cAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAtgt                                                                      >  2:4597401/1‑93 (MQ=255)
                   cAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAAtgt                                                                      <  1:5994230/93‑1 (MQ=255)
                        gTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTac                                                                 >  2:497554/1‑93 (MQ=255)
                        gTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTac                                                                 >  1:1542607/1‑93 (MQ=255)
                           tGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTAcacc                                                              <  1:4913017/93‑1 (MQ=255)
                                cAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCAt                                                         <  2:3013479/93‑1 (MQ=255)
                                     cACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCa                                                    <  1:1880638/93‑1 (MQ=255)
                                     cACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCa                                                    >  1:779246/1‑93 (MQ=255)
                                     cACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCa                                                    >  1:6578555/1‑93 (MQ=255)
                                       ccTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCaaa                                                  >  2:3978772/1‑93 (MQ=255)
                                       ccTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCaaa                                                  >  2:5856822/1‑93 (MQ=255)
                                       ccTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCaaa                                                  >  1:1804586/1‑93 (MQ=255)
                                       ccTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCaaa                                                  >  2:6293049/1‑93 (MQ=255)
                                         tACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAAcc                                                >  1:1075671/1‑93 (MQ=255)
                                         tACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAAcc                                                >  1:263279/1‑93 (MQ=255)
                                         tACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAAcc                                                >  1:5432980/1‑93 (MQ=255)
                                          aCGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCa                                               >  2:831632/1‑93 (MQ=255)
                                           cGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCAt                                              >  1:6176599/1‑93 (MQ=255)
                                           cGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCAt                                              <  2:754811/93‑1 (MQ=255)
                                            gCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATc                                             <  2:3585202/93‑1 (MQ=255)
                                                ggCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATccgcc                                         >  2:5139890/1‑93 (MQ=255)
                                                 gCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATccgccg                                        >  1:639967/1‑93 (MQ=255)
                                                   aaTGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGaa                                      >  2:610208/1‑93 (MQ=255)
                                                    aTGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAAt                                     >  1:5679346/1‑93 (MQ=255)
                                                    aTGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAAt                                     <  2:1130159/93‑1 (MQ=255)
                                                    aTGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAAt                                     <  2:1254127/93‑1 (MQ=255)
                                                     tGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATc                                    <  1:1386576/93‑1 (MQ=255)
                                                     tGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATc                                    >  1:3578095/1‑93 (MQ=255)
                                                      gTAACAAGTGTGTTTATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCa                                   >  1:845337/1‑93 (MQ=255)
                                                      gTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCCAACCATCCGCCGAATCa                                   >  2:2347230/1‑93 (MQ=255)
                                                      gTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCa                                   >  2:5442981/1‑93 (MQ=255)
                                                         aCAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCaata                                <  2:666851/93‑1 (MQ=255)
                                                         aCAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCaata                                >  1:5068897/1‑93 (MQ=255)
                                                          cAAGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCaataa                               <  2:143841/93‑1 (MQ=255)
                                                           aaGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCaataat                              <  1:6650709/93‑1 (MQ=255)
                                                            aGTGTGTTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAAtt                             >  1:1771993/1‑93 (MQ=255)
                                                             gtgtgtTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTg                            <  2:4344756/93‑1 (MQ=255)
                                                             gtgtgtTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTg                            <  1:5879095/93‑1 (MQ=255)
                                                              tgtgtTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGc                           <  1:3507691/93‑1 (MQ=255)
                                                               gtgtTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATCATTGcc                          <  1:5557634/93‑1 (MQ=255)
                                                               gtgtTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGcc                          <  2:6561617/93‑1 (MQ=255)
                                                               gtgtTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTAcc                          >  2:1642674/1‑93 (MQ=255)
                                                                tgtTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGccc                         <  2:3836080/93‑1 (MQ=255)
                                                                tgtTGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGccc                         <  1:2783139/93‑1 (MQ=255)
                                                                  ttGATCTGATCCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGa                       >  1:4176401/1‑93 (MQ=255)
                                                                   tgatctgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGAt                      >  1:1651513/1‑93 (MQ=255)
                                                                     atctgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAg                    <  2:2827647/93‑1 (MQ=255)
                                                                     atctgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAg                    <  1:4718439/93‑1 (MQ=255)
                                                                      tctgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGt                   <  2:324316/93‑1 (MQ=255)
                                                                        tgatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGa                 >  1:93526/1‑93 (MQ=255)
                                                                         gatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGAt                <  1:3204563/93‑1 (MQ=255)
                                                                         gatcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGAt                >  1:1961909/1‑93 (MQ=255)
                                                                          atcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATc               <  2:6161594/93‑1 (MQ=255)
                                                                           tcCAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCg              >  2:3741358/1‑93 (MQ=255)
                                                                            ccAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGc             >  2:1804363/1‑93 (MQ=255)
                                                                             cAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCa            <  2:190212/93‑1 (MQ=255)
                                                                             cAGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCa            >  2:2428361/1‑93 (MQ=255)
                                                                              aGGGTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAg           >  1:3921634/1‑93 (MQ=255)
                                                                               gggTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAgt          >  1:3035295/1‑93 (MQ=255)
                                                                               gggTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAgt          >  1:3694149/1‑93 (MQ=255)
                                                                               gggTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAgt          >  2:3160666/1‑93 (MQ=255)
                                                                               gggTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAgt          >  2:6065064/1‑93 (MQ=255)
                                                                               gggTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAgt          >  1:1629346/1‑93 (MQ=255)
                                                                                 gTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAgtgt        >  2:6709418/1‑93 (MQ=255)
                                                                                 gTCAGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAgtgt        <  1:4842692/93‑1 (MQ=255)
                                                                                   cAGTTTTGCCCCACGCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGttc      <  2:2657708/93‑1 (MQ=255)
                                                                                    aGTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGttct     <  2:4828727/93‑1 (MQ=255)
                                                                                     gTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGttctt    >  1:461729/1‑93 (MQ=255)
                                                                                     gTTTTGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGttctt    >  1:4558545/1‑93 (MQ=255)
                                                                                      ttttGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGttcttc   <  1:578245/93‑1 (MQ=255)
                                                                                      ttttGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGttcttc   <  1:2844671/93‑1 (MQ=255)
                                                                                       tttGCCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCa  <  2:5569078/93‑1 (MQ=255)
                                                                                          |                                                                                         
TCCATCTGATAGAGATCGCCAGAGGTCTGTTTCAGCGCACCTACGCCAGGCAATGTAACAAGTGTGTTGATCTGATCCAGGGTCAGTTTTACCCCACTCAGGGCTGGAATGTTGTACACCACCATCGGCAAACCATCCGCCGAATCAATAATTGCCCGATAGTGATCGCAGTGTTCTTCA  >  NC_000913/3370688‑3370867

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: