BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	416,945	A→G	T194A (ACG→GCG)	phoB →	positive response regulator for pho regulon

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	416,945	0	A	G	100.0%	667.2 / NA	206	T194A (ACG→GCG)	phoB	positive response regulator for pho regulon
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (117/89); total (117/89)

Only 100 of 221 total aligned reads displayed.

CACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGATAT  >  NC_000913/416855‑417034

cACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACcgcgcg                                                                                         <  2:1361734/93‑1 (MQ=255)

 aCTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCgg                                                                                        >  1:572520/1‑93 (MQ=255)

 aCTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCgg                                                                                        <  2:2280884/93‑1 (MQ=255)

 aCTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCgg                                                                                        >  1:3493874/1‑93 (MQ=255)

 aCTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCgg                                                                                        >  1:3040611/1‑93 (MQ=255)

  cTTTTTTATGACGCATCCTGAGCGGGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGt                                                                                       <  1:2541813/93‑1 (MQ=255)

  cTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGt                                                                                       >  2:3173834/1‑93 (MQ=255)

  cTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGt                                                                                       <  2:4626214/93‑1 (MQ=255)

  cTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGt                                                                                       <  1:2329129/93‑1 (MQ=255)

   ttttttATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTc                                                                                      <  1:4772249/93‑1 (MQ=255)

   ttttttATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTc                                                                                      <  2:5559056/93‑1 (MQ=255)

     ttttATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGa                                                                                    <  1:5451130/93‑1 (MQ=255)

      tttATGACGAATCCTGAGCGCGTGTATAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGAt                                                                                   >  1:853006/1‑93 (MQ=255)

        tATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGt                                                                                 <  2:889431/93‑1 (MQ=255)

        tATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGt                                                                                 >  1:1665500/1‑93 (MQ=255)

        tATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGt                                                                                 >  2:6007385/1‑93 (MQ=255)

         aTGACGCATCCTGAGCGCGTGTACAGCCGCGATCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTc                                                                                <  1:1621236/93‑1 (MQ=255)

         aTGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTc                                                                                >  1:6639117/1‑93 (MQ=255)

         aTGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTc                                                                                >  1:1406590/1‑93 (MQ=255)

         aTGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTc                                                                                >  2:4185096/1‑93 (MQ=255)

          tGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGAGCGGTCGATGTcc                                                                               >  1:921604/1‑93 (MQ=255)

           gACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCca                                                                              >  1:6061451/1‑93 (MQ=255)

            aCGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCcac                                                                             <  2:3364930/93‑1 (MQ=255)

                aTCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATtc                                                                         >  2:5323579/1‑93 (MQ=255)

                aTCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATtc                                                                         >  2:1910083/1‑93 (MQ=255)

                aTCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATtc                                                                         >  1:5250151/1‑93 (MQ=255)

                aTCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATtc                                                                         <  1:4281935/93‑1 (MQ=255)

                 tCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATtcg                                                                        >  1:677092/1‑93 (MQ=255)

                 tCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATtcg                                                                        >  1:1962252/1‑93 (MQ=255)

                 tCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGGCCACATtcg                                                                        >  1:2897150/1‑93 (MQ=255)

                  ccTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATtcgt                                                                       >  2:6180666/1‑93 (MQ=255)

                   cTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATtcgtc                                                                      >  1:1857330/1‑93 (MQ=255)

                    tGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATtcgtcg                                                                     >  1:3758929/1‑93 (MQ=255)

                    tGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATtcgtcg                                                                     >  1:2300613/1‑93 (MQ=255)

                      aGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGcc                                                                   >  2:2059754/1‑93 (MQ=255)

                       gcgcGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCt                                                                  >  2:4493574/1‑93 (MQ=255)

                       gcgcGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCt                                                                  >  2:1207196/1‑93 (MQ=255)

                         gcgTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGc                                                                >  2:2997595/1‑93 (MQ=255)

                            tgtACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTa                                                             >  1:3307938/1‑93 (MQ=255)

                            tgtACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTa                                                             >  1:5508027/1‑93 (MQ=255)

                            tgtACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTa                                                             >  2:155266/1‑93 (MQ=255)

                             gtACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTaa                                                            <  2:3584588/93‑1 (MQ=255)

                              tACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTaaa                                                           >  2:2772212/1‑93 (MQ=255)

                              tACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTaaa                                                           <  1:5113863/93‑1 (MQ=255)

                                cAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGc                                                         <  1:2831515/93‑1 (MQ=255)

                                cAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGc                                                         >  2:2665114/1‑93 (MQ=255)

                                cAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGc                                                         >  1:415569/1‑93 (MQ=255)

                                  gCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCAc                                                       <  1:493420/93‑1 (MQ=255)

                                  gCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCAc                                                       >  1:6382934/1‑93 (MQ=255)

                                  gCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCAc                                                       <  2:4281975/93‑1 (MQ=255)

                                   ccGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACt                                                      >  2:3747407/1‑93 (MQ=255)

                                     gcgAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTgg                                                    <  1:1462507/93‑1 (MQ=255)

                                       gAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAg                                                  >  1:4486816/1‑93 (MQ=255)

                                        agcagcTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGc                                                 >  1:3570540/1‑93 (MQ=255)

                                         gcagcTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGcc                                                >  1:2752658/1‑93 (MQ=255)

                                         gcagcTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGcc                                                >  2:1797123/1‑93 (MQ=255)

                                          cagcTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGccc                                               <  2:2977972/93‑1 (MQ=255)

                                          cagcTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGccc                                               <  1:6084220/93‑1 (MQ=255)

                                            gcTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCcgg                                             >  2:4100196/1‑93 (MQ=255)

                                            gcTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCcgg                                             <  2:4458972/93‑1 (MQ=255)

                                            gcTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCagg                                             >  1:4587263/1‑93 (MQ=255)

                                             cTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCcggc                                            >  1:6069206/1‑93 (MQ=255)

                                             cTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCcggc                                            <  1:6425325/93‑1 (MQ=255)

                                              tGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCcggcg                                           <  2:1135835/93‑1 (MQ=255)

                                              tGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCcggcg                                           >  2:368102/1‑93 (MQ=255)

                                              tGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGAACGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCcggcg                                           >  1:2713832/1‑93 (MQ=255)

                                               gTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCcggcgg                                          <  2:3397739/93‑1 (MQ=255)

                                               gTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCcggcgg                                          >  2:5743068/1‑93 (MQ=255)

                                               gTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCcggcgg                                          >  2:3995992/1‑93 (MQ=255)

                                                   aaCCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCAt                                      <  1:5898868/93‑1 (MQ=255)

                                                    aCCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATg                                     >  1:2155783/1‑93 (MQ=255)

                                                        cGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCg                                 <  1:1536934/93‑1 (MQ=255)

                                                           cTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCAt                              >  2:6114481/1‑93 (MQ=255)

                                                           cTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCAt                              >  2:5152873/1‑93 (MQ=255)

                                                            tGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATg                             <  2:6648156/93‑1 (MQ=255)

                                                              gggAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGt                           >  1:1310554/1‑93 (MQ=255)

                                                               ggAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTg                          <  2:6491164/93‑1 (MQ=255)

                                                               ggAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTg                          >  1:2040442/1‑93 (MQ=255)

                                                               ggAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTg                          >  2:2851128/1‑93 (MQ=255)

                                                                gAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGc                         >  1:3942754/1‑93 (MQ=255)

                                                                 aactaactAGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCa                        <  1:10228/93‑1 (MQ=255)

                                                                  aCTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAg                       >  2:527975/1‑93 (MQ=255)

                                                                    tAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGAc                     >  2:524784/1‑93 (MQ=255)

                                                                      aCGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCg                   <  2:1082271/93‑1 (MQ=255)

                                                                      aCGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCg                   >  2:519833/1‑93 (MQ=255)

                                                                       cGTGTATGTGGTAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGt                  <  2:3598069/93‑1 (MQ=255)

                                                                       cGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGt                  <  2:5847903/93‑1 (MQ=255)

                                                                        gtgtATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTg                 <  1:1702349/93‑1 (MQ=255)

                                                                        gtgtATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGACCGGCGGGCATGACCGCATGGTGCAGACCGTg                 <  2:3124838/93‑1 (MQ=255)

                                                                         tgtATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTgc                <  2:3072516/93‑1 (MQ=255)

                                                                           tATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTgcgc              <  2:2304838/93‑1 (MQ=255)

                                                                             tgtgGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCGCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCgg            >  1:3188904/1‑93 (MQ=255)

                                                                               tgGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTa          >  1:471961/1‑93 (MQ=255)

                                                                                  aaGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAg       <  2:2518111/93‑1 (MQ=255)

                                                                                   aGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAgg      >  2:4900852/1‑93 (MQ=255)

                                                                                    gACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGa     >  2:2073107/1‑93 (MQ=255)

                                                                                    gACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGa     >  2:4158612/1‑93 (MQ=255)

                                                                                     aCCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGat    <  2:2487550/93‑1 (MQ=255)

                                                                                      ccGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGata   <  2:3939669/93‑1 (MQ=255)

                                                                                       cgcgcgGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGatat  <  1:5794740/93‑1 (MQ=255)

CACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGATAT  >  NC_000913/416855‑417034

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`