BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,395,250	C→T	G67G (GGG→GGA)	cafA ←	CafA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,395,250	0	C	T	100.0%	869.4 / NA	239	G67G (GGG→GGA)	cafA	CafA
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (123/116); total (123/116)

Only 100 of 244 total aligned reads displayed.

GCGCACCGTGAATTGCTTTTGTTCTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTC  >  NC_000913/3395160‑3395339

gcgcACCGTGAATTGCTTTTGTTCTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGtcc                                                                                         >  1:2519857/1‑93 (MQ=255)

  gcACCGTGAATTGCTTTTGTTCTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCaa                                                                                       >  2:2902966/1‑93 (MQ=255)

   ccccGTAAATTGTTTTTGTTCTTCCCCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAat                                                                                      <  1:4338397/91‑1 (MQ=255)

   cACCGTGAATTTCTTTTTTTCTTCCCCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAat                                                                                      <  2:5807180/93‑1 (MQ=255)

    cccGTGATTTGCTTTTGTTCTTCCCCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAata                                                                                     <  2:6134758/92‑1 (MQ=255)

    cccGTGAATTGCTTTTTTTCTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAata                                                                                     <  2:2266158/92‑1 (MQ=255)

    cccGTGAATTCTTTTTTTTCTTCTCCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAata                                                                                     <  1:1941814/92‑1 (MQ=255)

     ccGTGAATTGCTTTTGTTCTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAatat                                                                                    >  2:2463496/1‑93 (MQ=255)

     ccGTGAATTGCTTTTGTTCTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAatat                                                                                    >  2:6245907/1‑93 (MQ=255)

     ccGTGAATTGCTTTTGTTCTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAatat                                                                                    >  2:2373452/1‑93 (MQ=255)

         gAATTGCTTTTGTTCTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTAc                                                                                >  1:5904619/1‑93 (MQ=255)

         aaaTTGTTTTTGTCCTCCCCCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTAc                                                                                <  1:1738636/92‑1 (MQ=255)

          aaTTGTTTTTTTTCTTCCCCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACa                                                                               <  2:1349097/93‑1 (MQ=255)

          aaTTGCTTTTGTTCTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACa                                                                               >  1:6118533/1‑93 (MQ=255)

          aaTTGCTTTTGTTCTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACa                                                                               <  1:6703133/93‑1 (MQ=255)

           aTTGCTTTTGTTCTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACaa                                                                              >  2:3426020/1‑93 (MQ=255)

            ttGCTTTTGTTCTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACaaa                                                                             >  1:5264008/1‑93 (MQ=255)

             tgtttttGTTCTTCGCCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACaaaa                                                                            <  2:1853270/90‑1 (MQ=255)

              gCTTTTGTTCTCCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAg                                                                           <  2:4190036/93‑1 (MQ=255)

               tttttGTTCTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAgc                                                                          <  1:4007603/92‑1 (MQ=255)

               cTTTTGTTCTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAgc                                                                          >  2:6577603/1‑93 (MQ=255)

               cTTTTGTTCTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAgc                                                                          >  1:3347560/1‑93 (MQ=255)

                ttttGTTCTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAgcc                                                                         >  2:5633592/1‑93 (MQ=255)

                   tGTTTTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAgccgcc                                                                      <  1:2315279/93‑1 (MQ=255)

                   tGTTCTCCCCCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAgccgcc                                                                      <  1:1211371/93‑1 (MQ=255)

                    gTTCTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCt                                                                     >  1:2230168/1‑93 (MQ=255)

                     ttcttcACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTg                                                                    >  2:4346590/1‑93 (MQ=255)

                     ttcttcACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTg                                                                    >  1:5827720/1‑93 (MQ=255)

                     ttcttcACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTg                                                                    >  1:183262/1‑93 (MQ=255)

                     ttcttcACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTg                                                                    >  2:1484938/1‑93 (MQ=255)

                     ttcttcACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTg                                                                    >  2:3158326/1‑93 (MQ=255)

                       cttcCCCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCa                                                                  <  2:2138137/93‑1 (MQ=255)

                       cttcACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGTCTGCa                                                                  >  1:6032659/1‑93 (MQ=255)

                        ttcACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCAt                                                                 >  2:6501808/1‑93 (MQ=255)

                           ccccGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATAcc                                                              <  2:509966/92‑1 (MQ=255)

                           aCCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATAcc                                                              >  2:4406440/1‑93 (MQ=255)

                           aCCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATAcc                                                              >  1:6410928/1‑93 (MQ=255)

                               gCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGa                                                          <  2:5129172/93‑1 (MQ=255)

                                ccACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGaa                                                         <  2:6352712/93‑1 (MQ=255)

                                ccACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGaa                                                         <  2:701454/93‑1 (MQ=255)

                                  acacaTTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGt                                                       >  1:2834274/1‑93 (MQ=255)

                                  acacaTTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGt                                                       >  1:2120377/1‑93 (MQ=255)

                                  acacaTTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGt                                                       <  1:182641/93‑1 (MQ=255)

                                  acacaTTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGt                                                       >  1:1304613/1‑93 (MQ=255)

                                  acacaTTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGt                                                       >  2:1104599/1‑93 (MQ=255)

                                   cacaTTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTa                                                      >  1:3235313/1‑93 (MQ=255)

                                   cacaTTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTa                                                      >  2:113322/1‑93 (MQ=255)

                                    acaTTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTac                                                     <  1:3684644/93‑1 (MQ=255)

                                     caTTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTaca                                                    >  1:4691061/1‑93 (MQ=255)

                                     caTTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTaca                                                    <  1:5328412/93‑1 (MQ=255)

                                     caTTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTaca                                                    >  1:4005530/1‑93 (MQ=255)

                                     caTTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTaca                                                    <  2:5883488/93‑1 (MQ=255)

                                      aTTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTacac                                                   >  2:1955825/1‑93 (MQ=255)

                                      aTTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTacac                                                   >  2:841934/1‑93 (MQ=255)

                                       ttCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACg                                                  >  2:2799899/1‑93 (MQ=255)

                                       ttCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACg                                                  >  2:6696163/1‑93 (MQ=255)

                                       ttCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACg                                                  >  2:1674540/1‑93 (MQ=255)

                                          ggTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACt                                               <  2:6468805/93‑1 (MQ=255)

                                          ggTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACt                                               >  1:2967141/1‑93 (MQ=255)

                                          ggTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACt                                               >  1:2770169/1‑93 (MQ=255)

                                           gtgtGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACtt                                              >  2:4530994/1‑93 (MQ=255)

                                              tgCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTaca                                           <  2:1657709/93‑1 (MQ=255)

                                               gCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTacac                                          <  1:634993/93‑1 (MQ=255)

                                               gCGGCATGAGGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTacac                                          <  1:4965676/93‑1 (MQ=255)

                                                 ggCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGa                                        >  1:4269235/1‑93 (MQ=255)

                                                 ggCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGa                                        <  1:211725/93‑1 (MQ=255)

                                                 ggCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGa                                        >  1:3755822/1‑93 (MQ=255)

                                                    atgatgTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGAccc                                     >  1:6356508/1‑93 (MQ=255)

                                                    atgatgTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGAccc                                     <  2:3908752/93‑1 (MQ=255)

                                                     tgatgTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCt                                    <  1:1093422/93‑1 (MQ=255)

                                                     tgatgTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCt                                    >  1:1464949/1‑93 (MQ=255)

                                                      gatgTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCtt                                   <  2:1177573/93‑1 (MQ=255)

                                                      gatgTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCtt                                   <  1:4383288/93‑1 (MQ=255)

                                                       atgTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTg                                  <  1:1276847/93‑1 (MQ=255)

                                                         gTCGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTa                                >  2:1049019/1‑93 (MQ=255)

                                                         gTCGGATGCATGAAGAAACGCGGCGTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTa                                >  2:3742797/1‑93 (MQ=255)

                                                           cGGATGCATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGa                              <  1:4521682/93‑1 (MQ=255)

                                                               tGCATGAAAAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATAtt                          >  1:6534247/1‑93 (MQ=255)

                                                                 cATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGc                        >  2:4450700/1‑93 (MQ=255)

                                                                 cATGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGc                        <  2:2687028/93‑1 (MQ=255)

                                                                  aTGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGcc                       >  1:522326/1‑93 (MQ=255)

                                                                  aTGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGcc                       <  1:3376642/93‑1 (MQ=255)

                                                                  aTGAAGAAACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGcc                       >  1:2858716/1‑93 (MQ=255)

                                                                    gaagaaACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCcta                     >  1:776182/1‑93 (MQ=255)

                                                                       gaaACGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCctacta                  >  1:5128774/1‑93 (MQ=255)

                                                                        aaaCGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTAt                 <  2:2879221/93‑1 (MQ=255)

                                                                         aaCGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTAtt                >  1:4193667/1‑93 (MQ=255)

                                                                         aaCGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTAtt                >  1:2479771/1‑93 (MQ=255)

                                                                          aCGCGGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATGCCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTc               <  2:1732134/93‑1 (MQ=255)

                                                                            gcgGCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCcg             >  2:3381170/1‑93 (MQ=255)

                                                                              ggCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCcgcg           >  2:4680281/1‑93 (MQ=255)

                                                                              ggCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCcgcg           >  1:1549888/1‑93 (MQ=255)

                                                                               gCTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGt          >  2:5647935/1‑93 (MQ=255)

                                                                                cTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTc         >  1:6638509/1‑93 (MQ=255)

                                                                                cTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTc         >  2:3863348/1‑93 (MQ=255)

                                                                                cTTTATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTc         <  1:1146135/93‑1 (MQ=255)

                                                                                 tttATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTcg        >  2:5251018/1‑93 (MQ=255)

                                                                                   tATCCAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTcgcg      >  1:5597692/1‑93 (MQ=255)

                                                                                       cAGTCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTc  <  1:1903291/93‑1 (MQ=255)

                                                                                       cAGTCCAATACCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTc  <  1:2436417/93‑1 (MQ=255)

GCGCACCGTGAATTGCTTTTGTTCTTCACCCGCCACACATTCGGTGTGCGGCATGATGTCGGATGCATGAAGAAACGCGGCTTTATCCAGCCCAATATCTACAAAAGCCGCCTGCATACCCGGAAGTACACGACTTACACGACCCTTGTAGATATTGCCTACTATTCCGCGTCGCGCCTC  >  NC_000913/3395160‑3395339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`