BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,433,176	T→C	R111R (CGT→CGC)	sun →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,433,176	0	T	C	100.0%	958.5 / NA	295	R111R (CGT→CGC)	sun	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (141/154); total (141/154)

Only 100 of 315 total aligned reads displayed.

TATGGTTGGTTTGTATCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGTCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGTTTAATGCCAGTGATGC  >  NC_000913/3433086‑3433265

tATGGTTGGTTTGTATCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGccc                                                                                         <  1:3824206/93‑1 (MQ=255)

tATGGTTGGTTTGTATCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGccc                                                                                         >  2:3798258/1‑93 (MQ=255)

  tggttggtTTGTATCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGc                                                                                       >  2:3277640/1‑93 (MQ=255)

     ttggttTGTATCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAAc                                                                                    <  2:4275872/93‑1 (MQ=255)

      tggttTGTATCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACt                                                                                   >  2:1345378/1‑93 (MQ=255)

      tggttTGTATCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACt                                                                                   <  1:1843615/93‑1 (MQ=255)

       ggttTGTATCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACtt                                                                                  >  1:6151359/1‑93 (MQ=255)

        gttTGTATCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTa                                                                                 >  2:4916671/1‑93 (MQ=255)

        gttTGTATCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTa                                                                                 >  2:6621608/1‑93 (MQ=255)

         tttGTATCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTaa                                                                                <  1:2170813/93‑1 (MQ=255)

         tttGTATCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTaa                                                                                <  1:4037278/93‑1 (MQ=255)

         tttGTATCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTaa                                                                                >  1:4260771/1‑93 (MQ=255)

           tGTATCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAg                                                                              <  2:779030/93‑1 (MQ=255)

           tGTATCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAg                                                                              <  2:1961478/93‑1 (MQ=255)

             tATCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAggg                                                                            <  1:3784384/93‑1 (MQ=255)

             tATCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAggg                                                                            <  2:6084290/93‑1 (MQ=255)

             tATCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAggg                                                                            <  1:5731697/93‑1 (MQ=255)

              aTCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGt                                                                           <  2:6282212/93‑1 (MQ=255)

               tCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGtt                                                                          <  1:5579621/93‑1 (MQ=255)

                 aaCTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGa                                                                        <  2:241784/93‑1 (MQ=255)

                  aCTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGAt                                                                       <  1:2987432/93‑1 (MQ=255)

                  aCTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGAt                                                                       >  1:5376083/1‑93 (MQ=255)

                       tttATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACg                                                                  >  1:2810352/1‑93 (MQ=255)

                        ttATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACgg                                                                 >  2:5755224/1‑93 (MQ=255)

                         tatcCCCGCATTCCACCTCACGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGgt                                                                <  1:146791/93‑1 (MQ=255)

                         tataCCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGgt                                                                >  1:6342912/1‑93 (MQ=255)

                           tgcacGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGgtgt                                                              <  1:6486216/89‑1 (MQ=255)

                           taCCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGgtgt                                                              >  1:248458/1‑93 (MQ=255)

                           taCCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGgtgt                                                              <  2:4314666/93‑1 (MQ=255)

                            aCCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTa                                                             >  2:1516852/1‑93 (MQ=255)

                            aCCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTa                                                             <  2:3756887/93‑1 (MQ=255)

                              ccGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATCACACGTGTAtt                                                           >  2:3172663/1‑93 (MQ=255)

                              ccGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTAtt                                                           >  1:3878124/1‑93 (MQ=255)

                               cGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTa                                                          <  2:5507540/93‑1 (MQ=255)

                                gCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTAc                                                         >  1:4873463/1‑93 (MQ=255)

                                gCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTAc                                                         <  1:764027/93‑1 (MQ=255)

                                gCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTAc                                                         <  2:6684696/93‑1 (MQ=255)

                                  aTTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGc                                                       >  2:5974017/1‑93 (MQ=255)

                                   ttCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGcc                                                      <  2:5270244/93‑1 (MQ=255)

                                   ttCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGcc                                                      >  1:2073358/1‑93 (MQ=255)

                                    tCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCa                                                     <  2:819242/93‑1 (MQ=255)

                                    tCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCa                                                     >  1:364756/1‑93 (MQ=255)

                                     ccACCTCATGCTGCGCTGGCTGAAACTGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGTGTTGATAAGCGGTGTATTACGCCAg                                                    <  1:3522570/93‑1 (MQ=255)

                                      cACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGt                                                   >  2:450306/1‑93 (MQ=255)

                                          tCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACACCAGTTCCa                                               >  1:1328812/1‑93 (MQ=255)

                                           cATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAg                                              >  2:3087175/1‑93 (MQ=255)

                                            aTGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCACAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGc                                             >  2:3813805/1‑93 (MQ=255)

                                             tgctgcGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCg                                            <  2:5120885/93‑1 (MQ=255)

                                               ctgcGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTc                                          <  1:3347336/93‑1 (MQ=255)

                                                tgcGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCACCTTAAAGGGTTGATAACCGGTGTATTCCGCCAGTTCCAGCGTCa                                         <  1:5300525/93‑1 (MQ=255)

                                                tgcGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCa                                         <  2:566355/93‑1 (MQ=255)

                                                tgcGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCa                                         <  1:4733069/93‑1 (MQ=255)

                                                 gcgcTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAg                                        >  1:5655356/1‑93 (MQ=255)

                                                    ctggctgAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCaa                                     <  2:2203665/93‑1 (MQ=255)

                                                    ctggctgAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCaa                                     <  2:2544283/93‑1 (MQ=255)

                                                     tggctgAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCaag                                    >  1:4451874/1‑93 (MQ=255)

                                                       gctgAAACGGTTGAAGGCTCTATCGCAGTTAAGCGCTCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCaagaa                                  <  2:2913383/93‑1 (MQ=255)

                                                       gctgAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCaagaa                                  >  1:1714860/1‑93 (MQ=255)

                                                       gctgAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCaagaa                                  <  2:2121004/93‑1 (MQ=255)

                                                        ctgAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCaagaag                                 <  2:497117/93‑1 (MQ=255)

                                                          gAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAagag                               >  1:1975321/1‑93 (MQ=255)

                                                          gAAACGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAagag                               >  2:2037374/1‑93 (MQ=255)

                                                            aaCGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGtt                             >  2:2735169/1‑93 (MQ=255)

                                                            aaCGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGtt                             >  2:4165740/1‑93 (MQ=255)

                                                              cGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGttat                           <  1:918777/93‑1 (MQ=255)

                                                              cGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGttat                           >  2:5787422/1‑93 (MQ=255)

                                                              cGGTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGttat                           >  2:144525/1‑93 (MQ=255)

                                                               ggTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGttatt                          >  2:881668/1‑93 (MQ=255)

                                                               ggTTGAAGGCGCTATCGCAATAAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGttatt                          <  2:3351010/93‑1 (MQ=255)

                                                                gTTGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGttatta                         <  2:1108254/93‑1 (MQ=255)

                                                                 ttGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAg                        >  1:4849052/1‑93 (MQ=255)

                                                                  tGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGc                       >  2:1203069/1‑93 (MQ=255)

                                                                  tGAAGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGc                       >  1:1245312/1‑93 (MQ=255)

                                                                    aaGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCg                     <  2:297326/93‑1 (MQ=255)

                                                                    aaGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCg                     >  2:3614947/1‑93 (MQ=255)

                                                                     aGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGa                    <  1:1574640/93‑1 (MQ=255)

                                                                     aGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGa                    >  1:5120314/1‑93 (MQ=255)

                                                                     aGGCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGa                    >  1:2262233/1‑93 (MQ=255)

                                                                      ggCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAg                   >  1:5520172/1‑93 (MQ=255)

                                                                      ggCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAg                   >  1:3142811/1‑93 (MQ=255)

                                                                      ggCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAg                   >  2:4403860/1‑93 (MQ=255)

                                                                      ggCGCTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAg                   >  2:232283/1‑93 (MQ=255)

                                                                       gcgcTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGt                  <  1:5973919/93‑1 (MQ=255)

                                                                       gcgcTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGt                  <  1:3179210/93‑1 (MQ=255)

                                                                        cgcTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGtt                 <  1:4078864/93‑1 (MQ=255)

                                                                         gcTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGttt                >  1:5636573/1‑93 (MQ=255)

                                                                         gcTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGttt                <  1:1772132/93‑1 (MQ=255)

                                                                         gcTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGttt                <  2:6219334/93‑1 (MQ=255)

                                                                          cTATCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGTTTa               >  2:638641/1‑93 (MQ=255)

                                                                            aTCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGTTTAAt             >  1:3389168/1‑93 (MQ=255)

                                                                             tCGCAATTAAGCGCGCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGTTTAATg            <  2:2869384/93‑1 (MQ=255)

                                                                             tCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGTTTAATg            <  1:103861/93‑1 (MQ=255)

                                                                             tCGCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGTTTAATg            >  1:136651/1‑93 (MQ=255)

                                                                               gCAATTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGTTTAATGcc          <  1:523379/93‑1 (MQ=255)

                                                                                 aaTTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGTTTAATGCCAg        <  2:3994362/93‑1 (MQ=255)

                                                                                  aTTAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGTTTAATGCCAGt       <  2:1989445/93‑1 (MQ=255)

                                                                                   ttAAGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGTTTAATGCCAGTg      >  2:647485/1‑93 (MQ=255)

                                                                                     aaGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGTTTAATGCCAGTGAt    <  1:4500595/93‑1 (MQ=255)

                                                                                     aaGCGCCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGTTTAATGCCAGTGAt    <  2:5241242/93‑1 (MQ=255)

                                                                                       gcgcCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGTTTAATGCCAGTGATGc  >  1:4940826/1‑93 (MQ=255)

TATGGTTGGTTTGTATCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGTCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGTTTAATGCCAGTGATGC  >  NC_000913/3433086‑3433265

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`