Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,475,807 T→C T110A (ACT→GCT)  slyD ← FKBP‑type peptidyl‑prolyl cis‑trans isomerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,475,8070TC100.0% 972.2 / NA 299T110A (ACT→GCT) slyDFKBP‑type peptidyl‑prolyl cis‑trans isomerase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (142/157);  total (142/157)

Only 100 of 312 total aligned reads displayed.

GAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGTGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAG  >  NC_000913/3475717‑3475896
                                                                                          |                                                                                         
gAATCGCCACAACTTCAACGTTAAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACAGCAGCGa                                                                                         <  1:6606441/93‑1 (MQ=255)
caaTCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGa                                                                                         <  1:3667078/92‑1 (MQ=255)
  aTCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGAtt                                                                                       >  1:5329069/1‑93 (MQ=255)
  aTCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGAtt                                                                                       <  2:2787956/93‑1 (MQ=255)
  aTCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGAtt                                                                                       >  1:3766013/1‑93 (MQ=255)
  aTCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGAtt                                                                                       <  2:5763477/93‑1 (MQ=255)
    cGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTc                                                                                     >  1:6375963/1‑93 (MQ=255)
      ccACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCaa                                                                                   >  1:4796757/1‑93 (MQ=255)
       cacaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAc                                                                                  >  1:4439225/1‑93 (MQ=255)
       cacaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAc                                                                                  <  2:5842163/93‑1 (MQ=255)
        acaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAcc                                                                                 >  2:750622/1‑93 (MQ=255)
        acaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAcc                                                                                 <  1:3328123/93‑1 (MQ=255)
        acaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAAcc                                                                                 >  2:6054014/1‑93 (MQ=255)
        acaACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGGGATCGTCTTCAACCGCAGCGATTTCAAcg                                                                                 >  2:4053174/1‑92 (MQ=255)
          aaCTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCgg                                                                               >  2:3158175/1‑93 (MQ=255)
          aaCTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCgg                                                                               <  1:2502219/93‑1 (MQ=255)
           aCTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGt                                                                              >  1:2246778/1‑93 (MQ=255)
           aCTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGt                                                                              >  2:3268191/1‑93 (MQ=255)
           aCTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGt                                                                              >  1:6075167/1‑93 (MQ=255)
             ttCAACGTTTAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCAGGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTAc                                                                            <  1:5414280/93‑1 (MQ=255)
                aaCGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCgg                                                                         >  2:4605408/1‑93 (MQ=255)
                aaCGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCgg                                                                         <  1:5982449/93‑1 (MQ=255)
                aaCGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCgg                                                                         >  1:671090/1‑93 (MQ=255)
                 aCGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGa                                                                        <  2:2615455/93‑1 (MQ=255)
                 aCGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGa                                                                        >  2:6169552/1‑93 (MQ=255)
                   gTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGAcc                                                                      >  2:2217947/1‑93 (MQ=255)
                   gTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGAcc                                                                      >  1:242739/1‑93 (MQ=255)
                   gTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGAcc                                                                      <  1:2115601/93‑1 (MQ=255)
                   gTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGAcc                                                                      >  1:196684/1‑93 (MQ=255)
                   cttGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGAcc                                                                      <  2:1533389/92‑1 (MQ=255)
                    gtGAATTTCAGGTTCTGACCGGGCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGAccc                                                                     <  2:245265/92‑1 (MQ=255)
                      gAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTg                                                                   <  2:2293020/93‑1 (MQ=255)
                       aaTTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTgg                                                                  <  1:2762612/93‑1 (MQ=255)
                       aaTTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTgg                                                                  <  1:4588965/93‑1 (MQ=255)
                        aTTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGt                                                                 <  2:3500881/93‑1 (MQ=255)
                        aTTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGt                                                                 <  2:2993935/93‑1 (MQ=255)
                         tttCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTc                                                                >  2:6429740/1‑93 (MQ=255)
                         tttCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTc                                                                >  1:1413094/1‑93 (MQ=255)
                         tttCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCCGTACCGGACCCTGGtg                                                                >  2:2656689/1‑92 (MQ=255)
                           tCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCgg                                                              <  2:1920136/93‑1 (MQ=255)
                            cAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGt                                                             <  2:3244794/93‑1 (MQ=255)
                             aGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGtt                                                            <  1:4931733/93‑1 (MQ=255)
                              ggTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGttt                                                           >  2:4781177/1‑93 (MQ=255)
                                ttCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCa                                                         >  2:885903/1‑93 (MQ=255)
                                    gACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCa                                                     >  2:1177596/1‑93 (MQ=255)
                                      ccGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAgg                                                   <  2:132613/93‑1 (MQ=255)
                                         gCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGaaa                                                >  2:3671003/1‑93 (MQ=255)
                                          ccAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAAc                                               >  1:1905086/1‑93 (MQ=255)
                                           cAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACg                                              >  2:5661923/1‑93 (MQ=255)
                                           cAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACg                                              >  1:1848275/1‑93 (MQ=255)
                                           cAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACg                                              <  2:2371117/93‑1 (MQ=255)
                                            aGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCATCCAGGAAACGc                                             >  2:4366472/1‑93 (MQ=255)
                                            aGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGc                                             >  2:4653429/1‑93 (MQ=255)
                                            aGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGCTTCACCCACGCAACGc                                             >  1:2862250/1‑93 (MQ=255)
                                             gCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCa                                            >  1:3505578/1‑93 (MQ=255)
                                             gCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCa                                            <  2:5389904/93‑1 (MQ=255)
                                               aTGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAta                                          <  2:1616741/93‑1 (MQ=255)
                                               aTGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAta                                          <  1:6267508/93‑1 (MQ=255)
                                               aTGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAta                                          >  1:733775/1‑93 (MQ=255)
                                                tgtgGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAtac                                         <  1:5017512/93‑1 (MQ=255)
                                                 gtgGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAtacc                                        <  2:1421990/93‑1 (MQ=255)
                                                   ggTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAtaccta                                      <  1:4524188/93‑1 (MQ=255)
                                                     ttACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCAtacctacc                                    <  2:2883552/93‑1 (MQ=255)
                                                      tACCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATacctacct                                   <  1:159863/93‑1 (MQ=255)
                                                       aCCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTg                                  >  2:6715952/1‑93 (MQ=255)
                                                       aCCATCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTg                                  >  1:4043209/1‑93 (MQ=255)
                                                          aTCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAg                               <  1:851833/93‑1 (MQ=255)
                                                           tCAACCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGt                              >  1:3835753/1‑93 (MQ=255)
                                                              aCCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTtca                           <  2:4894925/93‑1 (MQ=255)
                                                              aCCACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTtca                           <  2:2515940/93‑1 (MQ=255)
                                                               ccACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTtcat                          <  1:5718309/93‑1 (MQ=255)
                                                               ccACGACGTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTtcat                          >  2:6593198/1‑93 (MQ=255)
                                                                 acgacgTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTtcatca                        >  2:3956654/1‑93 (MQ=255)
                                                                  cgacgTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCaa                       >  1:6175554/1‑93 (MQ=255)
                                                                    acgTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACg                     >  2:5284227/1‑93 (MQ=255)
                                                                    acgTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACg                     >  1:4274366/1‑93 (MQ=255)
                                                                    acgTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACg                     >  1:4656216/1‑93 (MQ=255)
                                                                      gTGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGcc                   >  2:1573564/1‑93 (MQ=255)
                                                                       tGATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGccc                  <  1:2297005/93‑1 (MQ=255)
                                                                        gATCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCa                 <  1:5929160/93‑1 (MQ=255)
                                                                          tCGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATa               >  2:2943907/1‑93 (MQ=255)
                                                                          tCGTCTTCAACCGCAGCGACTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATa               >  2:414596/1‑93 (MQ=255)
                                                                           cGTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATaa              >  1:5152529/1‑93 (MQ=255)
                                                                            gTCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATaaa             >  1:5905984/1‑93 (MQ=255)
                                                                             tCTTCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGGCGGGTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAAt            >  1:1221712/1‑93 (MQ=255)
                                                                               ttCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATAc          <  2:2745687/93‑1 (MQ=255)
                                                                               ttCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATAc          <  1:1789598/93‑1 (MQ=255)
                                                                               ttCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATAc          >  1:1022112/1‑93 (MQ=255)
                                                                               ttCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATAc          <  1:947373/93‑1 (MQ=255)
                                                                                tCAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACg         <  2:4250408/93‑1 (MQ=255)
                                                                                 cAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGt        <  1:522408/93‑1 (MQ=255)
                                                                                 cAACCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGt        >  2:6136910/1‑93 (MQ=255)
                                                                                  aaCCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTc       <  2:4447352/93‑1 (MQ=255)
                                                                                  aaCCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTc       <  2:1786682/93‑1 (MQ=255)
                                                                                  aaCCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTc       >  2:784856/1‑93 (MQ=255)
                                                                                   aCCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCt      >  1:5116208/1‑93 (MQ=255)
                                                                                   aCCGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCt      <  2:1006375/93‑1 (MQ=255)
                                                                                    ccGCAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCtt     >  1:559016/1‑93 (MQ=255)
                                                                                       cAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAg  >  2:5200893/1‑93 (MQ=255)
                                                                                       cAGCGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAg  >  2:5562960/1‑93 (MQ=255)
                                                                                          |                                                                                         
GAATCGCCACAACTTCAACGTTGAATTTCAGGTTCTGACCGGCCAGCATGTGGTTACCATCAACCACGACGTGATCGTCTTCAACCGCAGTGATTTCAACCGGTACCGGACCCTGGTCGGTTTCAGCCAGGAAACGCATACCTACCTGCAGTTCATCAACGCCCATAAATACGTCTTTAG  >  NC_000913/3475717‑3475896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: