BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,483,550	A→G	intergenic (‑95/‑207)	yhfA ← / → crp	hypothetical protein/cyclic AMP receptor protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,483,550	0	A	G	100.0%	1060.4 / NA	323	intergenic (‑95/‑207)	yhfA/crp	hypothetical protein/cyclic AMP receptor protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (148/175); total (148/175)

Only 100 of 328 total aligned reads displayed.

GCTACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACACCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGTCACA  >  NC_000913/3483460‑3483639

gCTACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGcc                                                                                         <  1:2915311/93‑1 (MQ=255)

 cTACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCa                                                                                        >  1:3457197/1‑93 (MQ=255)

  tACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAg                                                                                       >  1:5623317/1‑93 (MQ=255)

   aCTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAgg                                                                                      >  1:5465799/1‑93 (MQ=255)

   aCTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGCCATGCTGAAGCGCGACGCCAgg                                                                                      >  1:4402939/1‑93 (MQ=255)

    cTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGga                                                                                     <  2:2891383/93‑1 (MQ=255)

    cTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGga                                                                                     <  2:3982714/93‑1 (MQ=255)

     tCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGgag                                                                                    >  2:5926269/1‑93 (MQ=255)

       cACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGac                                                                                  >  2:1568951/1‑93 (MQ=255)

           gCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACaa                                                                              >  1:6230265/1‑93 (MQ=255)

            cGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACaaa                                                                             <  1:4518714/93‑1 (MQ=255)

            cGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACaaa                                                                             >  2:2436534/1‑93 (MQ=255)

            cGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACaaa                                                                             <  1:2839660/93‑1 (MQ=255)

             gTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAg                                                                            >  2:5454101/1‑93 (MQ=255)

             gTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAg                                                                            >  2:1275791/1‑93 (MQ=255)

              tCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGc                                                                           >  2:3923756/1‑93 (MQ=255)

              tCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGc                                                                           <  2:6620296/93‑1 (MQ=255)

              tCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGc                                                                           >  2:3566004/1‑93 (MQ=255)

                aaTTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGa                                                                         >  1:4689979/1‑93 (MQ=255)

                aaTTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGa                                                                         <  1:216674/93‑1 (MQ=255)

                aaTTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGa                                                                         >  1:5758442/1‑93 (MQ=255)

                  ttttCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGaaa                                                                       <  2:2248492/93‑1 (MQ=255)

                  ttttCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGaaa                                                                       <  1:1054186/93‑1 (MQ=255)

                  ttttCCTGACAGAGTACGCGTACTAACAAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGaaa                                                                       <  1:6014653/93‑1 (MQ=255)

                     tCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCt                                                                    <  2:1357786/93‑1 (MQ=255)

                     tCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCt                                                                    <  2:1467535/93‑1 (MQ=255)

                     tCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCt                                                                    <  1:2278577/93‑1 (MQ=255)

                      ccTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTa                                                                   <  2:4203335/93‑1 (MQ=255)

                      ccTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTa                                                                   >  2:6104448/1‑93 (MQ=255)

                         gACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGc                                                                <  2:1741714/93‑1 (MQ=255)

                         gACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGc                                                                >  2:5122824/1‑93 (MQ=255)

                          aCAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCt                                                               >  2:4528119/1‑93 (MQ=255)

                           cAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTa                                                              >  2:5664214/1‑93 (MQ=255)

                             gagTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTaaa                                                            >  1:3761487/1‑93 (MQ=255)

                             gagTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTaaa                                                            >  2:6081397/1‑93 (MQ=255)

                              agTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTaaaa                                                           >  2:2541051/1‑93 (MQ=255)

                                tACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACa                                                         <  1:3010902/93‑1 (MQ=255)

                                 aCGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAg                                                        <  1:981176/93‑1 (MQ=255)

                                 aCGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAg                                                        <  1:3088336/93‑1 (MQ=255)

                                   gcgTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTc                                                      <  2:1189390/93‑1 (MQ=255)

                                   gcgTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTc                                                      <  2:3423069/93‑1 (MQ=255)

                                    cgTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCa                                                     <  2:323424/93‑1 (MQ=255)

                                      tACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAgg                                                   <  1:6448122/93‑1 (MQ=255)

                                       aCTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGa                                                  <  1:524867/93‑1 (MQ=255)

                                        cTAACCAAATCGCGCAACGGAAGGCTACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGAt                                                 <  1:3311494/93‑1 (MQ=255)

                                        cTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGAt                                                 >  2:3067503/1‑93 (MQ=255)

                                        cTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGAt                                                 <  2:1400912/93‑1 (MQ=255)

                                         tAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGGTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATg                                                <  2:6267858/93‑1 (MQ=255)

                                           aCCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCt                                              >  1:4437081/1‑93 (MQ=255)

                                           aCCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCt                                              >  1:1509280/1‑93 (MQ=255)

                                            ccAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTa                                             >  2:2660019/1‑93 (MQ=255)

                                            ccAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTa                                             <  2:5003494/93‑1 (MQ=255)

                                             cAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTAc                                            <  2:4263425/93‑1 (MQ=255)

                                              aaaTCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACa                                           >  1:2588977/1‑93 (MQ=255)

                                              aaaTCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACa                                           >  1:508444/1‑93 (MQ=255)

                                               aaTCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAg                                          <  1:386832/93‑1 (MQ=255)

                                                aTCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGt                                         >  2:4428087/1‑93 (MQ=255)

                                                aTCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGt                                         >  1:6140596/1‑93 (MQ=255)

                                                    cgcAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATa                                     <  2:808170/93‑1 (MQ=255)

                                                     gcAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATAc                                    <  2:2139057/93‑1 (MQ=255)

                                                     gcAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATAc                                    >  1:79560/1‑93 (MQ=255)

                                                       aaCGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGTATGCTACAGTAATACAt                                  <  1:2472386/93‑1 (MQ=255)

                                                       aaCGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACAt                                  <  1:6521092/93‑1 (MQ=255)

                                                       aaCGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACAt                                  >  2:5559945/1‑93 (MQ=255)

                                                        aCGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACAtt                                 >  2:2318404/1‑93 (MQ=255)

                                                        aCGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACAtt                                 <  2:6450239/93‑1 (MQ=255)

                                                        aCGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACAtt                                 <  1:374253/93‑1 (MQ=255)

                                                          ggAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGa                               >  1:6049576/1‑93 (MQ=255)

                                                           gAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGAt                              <  1:1334388/93‑1 (MQ=255)

                                                           gAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGAt                              <  1:2621583/93‑1 (MQ=255)

                                                            aaGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATg                             >  1:5019771/1‑93 (MQ=255)

                                                            aaGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATg                             >  1:3200070/1‑93 (MQ=255)

                                                             aGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGt                            >  1:1288584/1‑93 (MQ=255)

                                                             aGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGt                            >  1:2248399/1‑93 (MQ=255)

                                                               gCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTAc                          <  2:5835761/93‑1 (MQ=255)

                                                               gCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTAc                          >  2:1937878/1‑93 (MQ=255)

                                                                cGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACt                         <  1:6345906/93‑1 (MQ=255)

                                                                 gACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTg                        <  1:5840062/93‑1 (MQ=255)

                                                                   ccTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCa                      <  1:188478/93‑1 (MQ=255)

                                                                   ccTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCa                      <  1:140294/93‑1 (MQ=255)

                                                                    cTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCAt                     >  2:4855108/1‑93 (MQ=255)

                                                                           aTGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCa              >  2:203867/1‑93 (MQ=255)

                                                                            tGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCaa             >  1:3374874/1‑93 (MQ=255)

                                                                            tGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCaa             >  2:704237/1‑93 (MQ=255)

                                                                              cTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAg           <  2:1148081/93‑1 (MQ=255)

                                                                              cTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAg           <  1:4909540/93‑1 (MQ=255)

                                                                                gAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGa         <  2:5271267/93‑1 (MQ=255)

                                                                                gAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGa         <  2:4730568/93‑1 (MQ=255)

                                                                                gAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGa         <  2:3154356/93‑1 (MQ=255)

                                                                                gAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGa         >  2:108032/1‑93 (MQ=255)

                                                                                gAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGa         >  1:4030386/1‑93 (MQ=255)

                                                                                gAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGa         >  2:6663390/1‑93 (MQ=255)

                                                                                 aaGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGAc        <  2:3875118/93‑1 (MQ=255)

                                                                                 aaGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGAc        <  1:4101453/93‑1 (MQ=255)

                                                                                   gCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGt      >  2:857836/1‑93 (MQ=255)

                                                                                   gCGAGACGCAAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGCATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGGCGt      <  1:393303/93‑1 (MQ=255)

                                                                                    cGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGTc     <  1:16206/93‑1 (MQ=255)

                                                                                      agaCGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGTcac   <  2:411499/93‑1 (MQ=255)

                                                                                      agaCGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGTcac   >  2:3371046/1‑93 (MQ=255)

                                                                                       gaCGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGAAAAGGACGTcaca  >  1:2006364/1‑93 (MQ=255)

GCTACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACACCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGTCACA  >  NC_000913/3483460‑3483639

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`