BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,490,327	T→C	P41P (CCT→CCC)	yhfC →	putative transport

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,490,327	0	T	C	99.7%	987.1 / NA	301	P41P (CCT→CCC)	yhfC	putative transport
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (114/186); minor base A (0/1); total (114/187)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 308 total aligned reads displayed.

GATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCC  >  NC_000913/3490237‑3490416

gATTAGCTTTCTCTCCTACGCACTGACTGGTGCGGTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGt                                                                                         >  2:1859223/1‑93 (MQ=255)

 aTTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGtt                                                                                        >  2:5076367/1‑93 (MQ=255)

  ttAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGttt                                                                                       <  1:5833790/93‑1 (MQ=255)

  ttAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGttt                                                                                       <  1:4059073/93‑1 (MQ=255)

   tAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTc                                                                                      <  1:3935344/93‑1 (MQ=255)

   tAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTc                                                                                      >  1:1688310/1‑93 (MQ=255)

   tAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTc                                                                                      <  2:4463327/93‑1 (MQ=255)

    aGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTcc                                                                                     <  2:5314009/93‑1 (MQ=255)

    aGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTcc                                                                                     >  1:3642861/1‑93 (MQ=255)

     gCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCa                                                                                    >  1:5954274/1‑93 (MQ=255)

     gCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCa                                                                                    <  1:900607/93‑1 (MQ=255)

       tttCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGt                                                                                  >  1:1556309/1‑93 (MQ=255)

       tttCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGt                                                                                  >  1:413010/1‑93 (MQ=255)

        ttCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTa                                                                                 >  2:5563726/1‑93 (MQ=255)

        ttCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTa                                                                                 <  1:3041572/93‑1 (MQ=255)

         tctctcCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTAt                                                                                <  1:4203091/93‑1 (MQ=255)

         tctctcCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTAt                                                                                <  2:3962177/93‑1 (MQ=255)

          ctctcCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATg                                                                               >  2:3437518/1‑93 (MQ=255)

             tcCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAga                                                                            >  2:4329299/1‑92 (MQ=255)

             tcCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGt                                                                            <  2:3814231/93‑1 (MQ=255)

             tcCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGt                                                                            <  1:5024415/93‑1 (MQ=255)

               cTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTaa                                                                          <  1:3462670/93‑1 (MQ=255)

               cTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTaa                                                                          <  1:1248752/93‑1 (MQ=255)

               cTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTaa                                                                          <  2:6127927/93‑1 (MQ=255)

                tACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAAt                                                                         <  1:5597872/93‑1 (MQ=255)

                tACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAAt                                                                         <  1:5477313/93‑1 (MQ=255)

                tACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAAt                                                                         <  1:4570542/93‑1 (MQ=255)

                 aCGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATa                                                                        >  2:4223329/1‑93 (MQ=255)

                  cGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATac                                                                       >  1:4772017/1‑93 (MQ=255)

                  cGCACTGACTGGTGCGGTTGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATac                                                                       <  2:5274982/93‑1 (MQ=255)

                    cACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATacct                                                                     >  1:72542/1‑93 (MQ=255)

                    cACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATacct                                                                     <  2:1650189/93‑1 (MQ=255)

                    cACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATacct                                                                     >  1:5292089/1‑93 (MQ=255)

                    cACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATacct                                                                     <  1:215537/93‑1 (MQ=255)

                        gactgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttcac                                                                 <  1:6640162/93‑1 (MQ=255)

                        gactgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttcac                                                                 <  1:6244426/93‑1 (MQ=255)

                         gctgGGGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttcacc                                                                <  1:105800/92‑1 (MQ=255)

                          ctgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttcacct                                                               <  2:1345820/93‑1 (MQ=255)

                          ctgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttcacct                                                               <  2:5709392/93‑1 (MQ=255)

                          ctgGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttcacct                                                               <  1:4360509/93‑1 (MQ=255)

                            ggTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttcaccttc                                                             >  2:4072445/1‑93 (MQ=255)

                            ggTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATaccttcaccttc                                                             <  2:2655908/93‑1 (MQ=255)

                             gTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTcc                                                            <  1:4308190/93‑1 (MQ=255)

                              tGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCt                                                           <  2:2729581/93‑1 (MQ=255)

                              tGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCt                                                           >  2:1067815/1‑93 (MQ=255)

                               gCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTc                                                          <  1:3328426/93‑1 (MQ=255)

                               gCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTc                                                          <  2:2240324/93‑1 (MQ=255)

                                  ttGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAAc                                                       <  2:6682996/93‑1 (MQ=255)

                                  ttGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAAc                                                       >  1:2450303/1‑93 (MQ=255)

                                  ttGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAAc                                                       <  2:1730660/93‑1 (MQ=255)

                                    ggTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGc                                                     <  2:5838508/93‑1 (MQ=255)

                                     gTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGcc                                                    <  1:6061594/93‑1 (MQ=255)

                                        aTTGTCACCGGGATGTTGATGGGAGATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGc                                                 <  1:1315047/93‑1 (MQ=255)

                                        aTTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGc                                                 >  1:5231081/1‑93 (MQ=255)

                                        aTTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGc                                                 <  2:6513397/93‑1 (MQ=255)

                                         ttGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCa                                                >  2:6290156/1‑93 (MQ=255)

                                           gTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCAtt                                              >  2:4269465/1‑93 (MQ=255)

                                           gTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCAtt                                              >  2:4636924/1‑93 (MQ=255)

                                             cACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCAtttt                                            >  2:1518972/1‑93 (MQ=255)

                                              aCCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTa                                           >  2:3089431/1‑93 (MQ=255)

                                              aCCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTa                                           >  1:372100/1‑93 (MQ=255)

                                              aCCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTa                                           <  2:3228269/93‑1 (MQ=255)

                                               ccGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTaa                                          <  1:2693682/93‑1 (MQ=255)

                                                cGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAAt                                         <  2:5253278/93‑1 (MQ=255)

                                                cGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAAt                                         <  2:2452078/93‑1 (MQ=255)

                                                 gggATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAAtc                                        <  2:3491052/93‑1 (MQ=255)

                                                 gggATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAAtc                                        <  1:3275659/93‑1 (MQ=255)

                                                 gggATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAAtc                                        <  1:973719/93‑1 (MQ=255)

                                                     tGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTa                                    >  2:6366844/1‑93 (MQ=255)

                                                        taaTGTGAAATATCGCCTATTATTCCAATCTGCCCGTTTCCAGTATGAGTAATCCCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCt                                 <  1:4630634/91‑1 (MQ=255)

                                                        tGATGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCGCCTTCCTCAACGCCGGCATTTTAATCTCTATCt                                 <  1:3895143/93‑1 (MQ=255)

                                                           tGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTcc                              >  2:5790454/1‑93 (MQ=255)

                                                           tGGGAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTcc                              <  1:4432009/93‑1 (MQ=255)

                                                            gggAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCt                             >  1:2035315/1‑93 (MQ=255)

                                                            gggAAATATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCt                             >  2:594686/1‑93 (MQ=255)

                                                               aaaTATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCaa                          >  1:5687565/1‑93 (MQ=255)

                                                                aaTATCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAAc                         <  2:2544882/93‑1 (MQ=255)

                                                                  tatCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGc                       >  2:3902713/1‑93 (MQ=255)

                                                                  tatCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGc                       >  2:3676371/1‑93 (MQ=255)

                                                                   atCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGcc                      <  2:2358441/93‑1 (MQ=255)

                                                                   atCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGcc                      <  1:4867745/93‑1 (MQ=255)

                                                                   atCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGcc                      >  2:6254170/1‑93 (MQ=255)

                                                                   atCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGcc                      >  2:3333533/1‑93 (MQ=255)

                                                                    tCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCt                     <  2:884560/93‑1 (MQ=255)

                                                                    tCGCCGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCt                     <  1:1448013/93‑1 (MQ=255)

                                                                        cGATTATTTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCt                 >  1:6318560/1‑93 (MQ=255)

                                                                          attattTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCGACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGa               <  2:4702079/93‑1 (MQ=255)

                                                                          attattTCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGa               >  1:2255759/1‑93 (MQ=255)

                                                                              tttCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGa           <  1:1030548/93‑1 (MQ=255)

                                                                              tttCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGa           >  2:684440/1‑93 (MQ=255)

                                                                               ttCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGaa          <  1:1931060/93‑1 (MQ=255)

                                                                                tCAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGaaa         <  2:2017015/93‑1 (MQ=255)

                                                                                 cAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAAt        >  1:5149712/1‑93 (MQ=255)

                                                                                 cAATCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAAt        <  2:760576/93‑1 (MQ=255)

                                                                                  aaTCTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATc       <  2:5179173/93‑1 (MQ=255)

                                                                                     cTGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTc    >  2:4749126/1‑93 (MQ=255)

                                                                                      tGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTcc   <  2:2795066/93‑1 (MQ=255)

                                                                                      tGCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGACTGGCTGATGGAAATCGTcc   >  1:3130149/1‑93 (MQ=255)

                                                                                       gCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTccc  >  2:6099187/1‑93 (MQ=255)

                                                                                       gCCCGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTccc  <  1:5769167/93‑1 (MQ=255)

GATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCC  >  NC_000913/3490237‑3490416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`