Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,509,089 T→C N5S (AAC→AGC) 
E225E (GAA→GAG
yhfY ←
yhfZ ←
hypothetical protein
hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,509,0890TC100.0% 914.4 / NA 281N5S (AAC→AGC) 
E225E (GAA→GAG
yhfY
yhfZ
hypothetical protein
hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (146/135);  total (146/135)

Only 100 of 286 total aligned reads displayed.

CCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATC  >  NC_000913/3508999‑3509178
                                                                                          |                                                                                         
 cTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTcc                                                                                        >  2:1616448/1‑93 (MQ=255)
    tGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGt                                                                                     <  1:4405044/93‑1 (MQ=255)
        gATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTccc                                                                                 <  1:5473482/93‑1 (MQ=255)
        gATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTccc                                                                                 >  1:1830046/1‑93 (MQ=255)
         aTGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTcccc                                                                                >  2:3195380/1‑93 (MQ=255)
           gTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCcac                                                                              <  2:2992986/93‑1 (MQ=255)
           gTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCcac                                                                              >  1:274456/1‑93 (MQ=255)
            tCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCcact                                                                             >  2:3016205/1‑93 (MQ=255)
              cTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCcactca                                                                           >  1:4762717/1‑93 (MQ=255)
              cTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCcactca                                                                           >  2:3994524/1‑93 (MQ=255)
               ttATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCcactcac                                                                          >  2:4944261/1‑93 (MQ=255)
                tATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCcactcact                                                                         <  1:1657728/93‑1 (MQ=255)
                  tCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTAc                                                                       >  2:3400667/1‑93 (MQ=255)
                    aaTAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTAccc                                                                     >  1:6379775/1‑93 (MQ=255)
                     aTAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCg                                                                    >  1:6701928/1‑93 (MQ=255)
                        aCGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCgttg                                                                 >  2:1727636/1‑93 (MQ=255)
                         cGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCgttgt                                                                <  2:5715748/93‑1 (MQ=255)
                          gcctgcctCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCgttgtt                                                               <  2:867714/93‑1 (MQ=255)
                          gcctgcctCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCgttgtt                                                               <  1:890077/93‑1 (MQ=255)
                          ccctgcctCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCgttgtt                                                               <  1:1305826/92‑1 (MQ=255)
                           cctgcctCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGttgttg                                                              >  2:1267128/1‑93 (MQ=255)
                            ctgcctCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGa                                                             <  2:3765613/93‑1 (MQ=255)
                            ctgcctCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGa                                                             <  1:1760593/93‑1 (MQ=255)
                             tgcctCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGAt                                                            >  1:5684684/1‑93 (MQ=255)
                             tgcctCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGAt                                                            <  1:2875236/93‑1 (MQ=255)
                             tgcctCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGAt                                                            >  1:5507405/1‑93 (MQ=255)
                              gcctCGAAAAGGAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATg                                                           <  2:3636490/93‑1 (MQ=255)
                               cctCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATgg                                                          <  2:1921140/93‑1 (MQ=255)
                               cctCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATgg                                                          <  2:4840482/93‑1 (MQ=255)
                                ctCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATggg                                                         >  2:6605226/1‑93 (MQ=255)
                                ctCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATggg                                                         >  2:2477662/1‑93 (MQ=255)
                                ctCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATggg                                                         <  2:4607265/93‑1 (MQ=255)
                                 tCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGc                                                        >  1:2642890/1‑93 (MQ=255)
                                  cGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCg                                                       <  2:4454475/93‑1 (MQ=255)
                                  cGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCg                                                       <  1:3007623/93‑1 (MQ=255)
                                   gCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGa                                                      <  1:980408/93‑1 (MQ=255)
                                     aaaGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGc                                                    <  2:23939/93‑1 (MQ=255)
                                     aaaGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGc                                                    >  2:1498453/1‑93 (MQ=255)
                                     aaaGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTAACCGTTGTTGATGGGCGAGc                                                    >  1:2362745/1‑93 (MQ=255)
                                      aaGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCa                                                   >  1:1127908/1‑93 (MQ=255)
                                      aaGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCa                                                   >  1:1541114/1‑93 (MQ=255)
                                       aGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAg                                                  >  2:5973719/1‑93 (MQ=255)
                                        gCAGGTTGAGCCTGGTTTCCGTATCAGATGGCTTTCGTGTTAAAACTCGGCTCCTGGTCCCCACTCACTACCCGTTGTTGATGGGCGAGcccg                                                 >  1:4100219/1‑90 (MQ=255)
                                         cAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAggg                                                <  2:2787856/93‑1 (MQ=255)
                                         cAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAggg                                                <  1:2131958/93‑1 (MQ=255)
                                           ggTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCg                                              <  1:6564776/93‑1 (MQ=255)
                                           ggTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCg                                              >  2:4531943/1‑93 (MQ=255)
                                            gTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCgt                                             >  2:4254298/1‑93 (MQ=255)
                                            gTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCgt                                             <  2:1120943/93‑1 (MQ=255)
                                               gAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGtt                                          >  2:1405120/1‑93 (MQ=255)
                                                aGTGTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGttt                                         <  2:3541992/93‑1 (MQ=255)
                                                 gTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTa                                        <  2:4498746/93‑1 (MQ=255)
                                                 gTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTa                                        <  1:76316/93‑1 (MQ=255)
                                                  tCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTAt                                       <  1:3864638/93‑1 (MQ=255)
                                                  tCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTAt                                       <  1:3968204/93‑1 (MQ=255)
                                                    tGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCt                                     <  1:4480024/93‑1 (MQ=255)
                                                    tGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCt                                     <  2:5344968/93‑1 (MQ=255)
                                                     ggTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTa                                    >  1:1376634/1‑93 (MQ=255)
                                                     ggTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTa                                    <  2:5391827/93‑1 (MQ=255)
                                                       tttCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACa                                  <  2:2062496/93‑1 (MQ=255)
                                                       tttCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACa                                  >  2:441785/1‑93 (MQ=255)
                                                        ttCCATATCAGATGCCTTTCGTTTAATACCTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACaa                                 <  2:5244464/93‑1 (MQ=255)
                                                         tCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAAc                                >  2:2340602/1‑93 (MQ=255)
                                                         tCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAAc                                <  1:6490138/93‑1 (MQ=255)
                                                         tCCATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAAc                                <  1:3643244/93‑1 (MQ=255)
                                                          ccATATCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACaatg                               >  1:5583771/1‑91 (MQ=255)
                                                            atatCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGc                             >  1:4252416/1‑93 (MQ=255)
                                                            atatCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGc                             >  1:1218871/1‑93 (MQ=255)
                                                             tatCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCa                            >  1:1085436/1‑93 (MQ=255)
                                                             tatCAGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCa                            >  1:5132047/1‑93 (MQ=255)
                                                                 aGATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACgca                        >  2:2557009/1‑93 (MQ=255)
                                                                  gATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACgcag                       >  2:4062845/1‑93 (MQ=255)
                                                                  gATGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGGTTATCTACAACGGCACgcag                       >  2:5681636/1‑93 (MQ=255)
                                                                   atcccTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTCCCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACgcagc                      <  1:6162691/90‑1 (MQ=255)
                                                                    tGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACgcagca                     >  2:2657134/1‑93 (MQ=255)
                                                                    tGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACgcagca                     >  1:3043303/1‑93 (MQ=255)
                                                                    tGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACgcagca                     <  2:655804/93‑1 (MQ=255)
                                                                    tGCCTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACgcagca                     <  1:5354482/93‑1 (MQ=255)
                                                                       cTTTCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAgtt                  <  1:2167430/93‑1 (MQ=255)
                                                                        tttCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAgttg                 >  2:6700259/1‑93 (MQ=255)
                                                                         ttCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAgttgt                <  1:2485086/93‑1 (MQ=255)
                                                                         ttCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAgttgt                <  1:4971413/93‑1 (MQ=255)
                                                                          tCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAgttgtt               <  2:4786810/93‑1 (MQ=255)
                                                                          tCGTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGACGTGTTTATCTACAACGGCACGCAGCAgttgtt               <  2:3449850/93‑1 (MQ=255)
                                                                            gTTTAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGc             >  1:5229417/1‑93 (MQ=255)
                                                                             tttAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCa            <  2:5877478/93‑1 (MQ=255)
                                                                              ttAATAACTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCAt           <  2:5033603/93‑1 (MQ=255)
                                                                               taataaCTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCAtt          >  1:3447023/1‑93 (MQ=255)
                                                                                aataaCTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTg         <  2:4767192/93‑1 (MQ=255)
                                                                                  taaCTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTggg       <  2:2175035/93‑1 (MQ=255)
                                                                                    aCTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTa     >  2:4663982/1‑93 (MQ=255)
                                                                                    aCTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTa     <  2:3296720/93‑1 (MQ=255)
                                                                                     cTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTaa    <  1:1924548/93‑1 (MQ=255)
                                                                                     cTCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTaa    <  1:5936333/93‑1 (MQ=255)
                                                                                      tCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAat   >  2:4847453/1‑93 (MQ=255)
                                                                                      tCGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAat   >  2:3243517/1‑93 (MQ=255)
                                                                                       cGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAatc  <  1:325873/93‑1 (MQ=255)
                                                                                       cGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAatc  >  1:3559281/1‑93 (MQ=255)
                                                                                       cGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAatc  <  1:4607306/93‑1 (MQ=255)
                                                                                       cGGCTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGGAatc  >  2:1831347/1‑93 (MQ=255)
                                                                                          |                                                                                         
CCTTTGCAGATGTCCTTATCAATAACGCCTGCCTCGCAAAGCAGGTTGAGTCTGGTTTCCATATCAGATGCCTTTCGTTTAATAACTCGGTTCCTGTTCCCCACTCACTACCCGTTGTTGATGGGCGAGCAGGGCGTGTTTATCTACAACGGCACGCAGCAGTTGTTGCATTGGGTAATC  >  NC_000913/3508999‑3509178

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: