| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,008,491 | 2 bp→CG | intergenic (+58/‑174) | b4555 → / → yigM | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,008,491 | 0 | G | C | 99.5% | 666.9 / NA | 207 | intergenic (+58/‑175) | b4555/yigM | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (109/97); total (109/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| * | NC_000913 | 4,008,492 | 0 | C | G | 99.5% | 655.5 / NA | 203 | intergenic (+59/‑174) | b4555/yigM | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base G (104/98); total (104/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 213 total aligned reads displayed.
AGCTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑G‑GGAAA‑GCTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACT > NC_000913/4008409‑4008577 || gccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCgcacc > 2:4888485/3‑93 (MQ=255) gAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCg > 2:3227353/1‑93 (MQ=255) aaGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGt > 1:1171613/1‑93 (MQ=255) aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCCTTATCGGCAGTGCGCACCAGCGTc > 2:2894029/1‑93 (MQ=255) aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTc < 2:5446439/93‑1 (MQ=255) aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTc < 2:4562313/93‑1 (MQ=255) aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTc > 2:2222735/1‑93 (MQ=255) ggATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCt < 2:3544748/93‑1 (MQ=255) ggATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCt > 1:3088337/1‑93 (MQ=255) ggATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCt > 1:3428999/1‑93 (MQ=255) ggATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCt > 1:2578659/1‑93 (MQ=255) tttggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCAt > 1:1300922/5‑93 (MQ=255) ttggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATc < 1:1541747/90‑1 (MQ=255) tggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATcc < 1:4408280/91‑1 (MQ=255) ggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATccc < 1:2826369/92‑1 (MQ=255) aCGGGATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑c > 1:1890233/1‑93 (MQ=255) gggATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑g > 1:4147953/1‑93 (MQ=255) ggATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑gg > 2:1383823/1‑92 (MQ=255) ggATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGAACTTCATCCCGAG‑CT‑gg > 1:5628743/1‑92 (MQ=255) gATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑gga > 2:1750914/1‑91 (MQ=255) gATGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑gga > 2:772777/1‑91 (MQ=255) aTGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑gtaa < 1:887591/93‑4 (MQ=255) aTGAACGACGCCGAAATCCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCATCTGAAAGACCTTCATCCCGAG‑CT‑ggaa < 1:6280598/93‑4 (MQ=255) tGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGCG‑CT‑ggaag > 2:2713972/1‑89 (MQ=255) tGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑ggaag < 2:1856778/93‑5 (MQ=255) tGAACGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑ggaag > 1:5853590/1‑89 (MQ=255) aaCGACGCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGCGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTg < 2:4706312/93‑1 (MQ=255) acgacgCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGa < 1:1853733/93‑1 (MQ=255) cgacgCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGAt < 1:3711509/93‑1 (MQ=255) gacgCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGAtt < 2:1688175/93‑1 (MQ=255) gacgCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGAtt < 1:6713870/93‑1 (MQ=255) acgCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTg > 1:5090591/1‑93 (MQ=255) cgCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTgg > 2:1225061/1‑93 (MQ=255) cgCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTgg > 1:5955087/1‑93 (MQ=255) cgCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTgg < 1:5208309/93‑1 (MQ=255) cgCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTgg < 1:4302275/93‑1 (MQ=255) gCCGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGt < 2:181629/93‑1 (MQ=255) ccGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTa < 1:6361071/93‑1 (MQ=255) cGAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTAc < 1:1342089/93‑1 (MQ=255) gAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACt > 1:1759317/1‑93 (MQ=255) gAAATGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACt > 2:4280959/1‑93 (MQ=255) aaaTGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTa < 2:2837379/93‑1 (MQ=255) aaTGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTaa > 1:2425079/1‑93 (MQ=255) aaTGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTaa < 2:3985208/93‑1 (MQ=255) aaTGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTaa < 2:6716343/93‑1 (MQ=255) tGCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATg < 2:5826858/93‑1 (MQ=255) gCTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGc < 2:3455917/93‑1 (MQ=255) gCTGTCGATGGC‑GCGGAAAGGCTGCATTATGGGCAGTCCGCCCCAGCGTCTGAAATGCCTTCATCCCGAGCCG‑GAAGTGATTGGTACTAATGc < 1:715021/93‑1 (MQ=255) cTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGTAGTGATTGGTACTAATGcc > 2:4980979/1‑93 (MQ=255) cTGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGcc < 1:4878850/93‑1 (MQ=255) tGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCcg > 1:3174338/1‑93 (MQ=255) tGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCcg < 2:5748722/93‑1 (MQ=255) tGTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCcg < 2:2323136/93‑1 (MQ=255) gTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCcga > 1:2813041/1‑93 (MQ=255) gTCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCcga < 2:5358275/93‑1 (MQ=255) tCGATGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCcgac < 1:221338/93‑1 (MQ=255) aTGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCgacgac > 2:6484589/1‑93 (MQ=255) aTGGCGG‑GGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCgacgac < 1:354068/93‑1 (MQ=255) ggcgg‑ggAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGAcgc < 1:2313858/89‑1 (MQ=255) ggcgg‑ggAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGAcgc > 2:6147149/5‑93 (MQ=255) gcgg‑ggAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGAcgcg > 2:6193499/4‑93 (MQ=255) cgg‑ggAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCgg < 1:4855572/91‑1 (MQ=255) gg‑ggAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCggg > 1:822334/2‑92 (MQ=255) gg‑ggAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGt < 1:1043309/92‑1 (MQ=255) gg‑ggAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGt < 2:170610/92‑1 (MQ=255) g‑ggAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTg < 2:5305292/93‑1 (MQ=255) ggAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGGCGACGCGGTGc > 2:5645734/1‑93 (MQ=255) ggAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGc < 2:1020381/93‑1 (MQ=255) ggAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGc > 1:2672885/1‑93 (MQ=255) ggAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGc < 2:5240877/93‑1 (MQ=255) aaggCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGc > 2:2648076/4‑93 (MQ=255) aggCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCa < 1:939286/91‑1 (MQ=255) aggCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCa > 2:2535959/3‑93 (MQ=255) ggCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCAt < 1:2010533/92‑1 (MQ=255) ggCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCAt > 1:5417169/2‑93 (MQ=255) ggCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCAt > 1:1746102/2‑93 (MQ=255) gCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCAtt > 1:5353172/1‑93 (MQ=255) gCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCAGCAtt < 2:3296063/93‑1 (MQ=255) cTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTa > 2:6576979/1‑93 (MQ=255) tGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTAt < 2:1502051/93‑1 (MQ=255) gCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATc > 1:39350/1‑93 (MQ=255) gCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATc < 2:2385110/93‑1 (MQ=255) gCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATc < 2:3980461/93‑1 (MQ=255) gCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATc < 1:4978638/93‑1 (MQ=255) aTTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTg > 1:1462990/1‑93 (MQ=255) aTTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTg > 1:2913587/1‑93 (MQ=255) aTTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTg > 1:6444809/1‑93 (MQ=255) ttATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGc < 2:2175213/93‑1 (MQ=255) ttATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGc < 2:6334642/93‑1 (MQ=255) ttATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGc > 2:3335337/1‑93 (MQ=255) ttATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGc > 2:5588468/1‑93 (MQ=255) atATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGc < 2:2990323/92‑1 (MQ=255) tATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCg < 1:2262963/93‑1 (MQ=255) tATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCg < 1:6089757/93‑1 (MQ=255) gggCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTaa > 1:3603202/1‑93 (MQ=255) gggCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTaa > 1:630849/1‑93 (MQ=255) ggCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTaaa > 2:394088/1‑93 (MQ=255) ggCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTaaa > 1:994733/1‑93 (MQ=255) gCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAAc < 1:2470737/93‑1 (MQ=255) cAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAAct < 1:328375/93‑1 (MQ=255) || AGCTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑G‑GGAAA‑GCTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAG‑CT‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACT > NC_000913/4008409‑4008577 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |