Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,627,142 +G intergenic (‑24/+23) yhiH ← / ← yhiI putative ATP‑binding component of a transport system, fragment 1/putative membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,627,1401.G99.5% 1598.1 / ‑1.5 407intergenic (‑22/+25)yhiH/yhiIputative ATP‑binding component of a transport system, fragment 1/putative membrane protein
Reads supporting (aligned to +/- strand):  ref base . (1/1);  new base G (208/197);  total (209/198)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 504 total aligned reads displayed.

CCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGC  >  NC_000913/3627045‑3627230
                                                                                                |                                                                                          
ccGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGc                                                                                             <  2:9140683/96‑1 (MQ=255)
ccGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGc                                                                                             <  1:4654222/96‑1 (MQ=255)
 cGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCg                                                                                           >  1:12076805/1‑96 (MQ=255)
  gACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCgg                                                                                          <  2:1602231/96‑1 (MQ=255)
   aCCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCggg                                                                                         >  2:6591450/1‑95 (MQ=255)
   aCCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCggg                                                                                         <  2:7304261/96‑2 (MQ=255)
    ccATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCggga                                                                                        >  2:12687715/1‑94 (MQ=255)
    ccATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCggga                                                                                        <  1:13281254/96‑3 (MQ=255)
    ccATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCggga                                                                                        >  2:8565971/1‑94 (MQ=255)
     cATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGgggggag                                                                                       >  1:12180102/1‑93 (MQ=255)
     cATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGATGCGCGACcggcgggac                                                                                       >  1:7629737/1‑93 (MQ=255)
      aTACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCgggacg                                                                                      <  1:2729556/96‑5 (MQ=255)
      aTACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCgggacg                                                                                      <  2:4630910/96‑5 (MQ=255)
        aCAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACggg                                                                                     >  2:11075593/1‑96 (MQ=255)
         cAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGcgggacggga                                                                                    <  2:3458711/96‑1 (MQ=255)
            ctggCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCCTACGCCAGCCAGTTGCGCGACAGGCGGGGCGGGAAcc                                                                                 >  1:10261686/3‑96 (MQ=255)
            cGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAAcc                                                                                 <  2:12272790/96‑1 (MQ=255)
            cGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAAcc                                                                                 >  2:3627124/1‑96 (MQ=255)
             gggCCGGAATATCGTGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAActa                                                                                <  1:3490167/96‑3 (MQ=255)
             gggCCGGAATATCGAGAGTGATCTTGTTCAGCGCAACGGTTTTTCCATAATGCTTGCTCCCGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCa                                                                                <  1:11172970/96‑1 (MQ=255)
             gggCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCa                                                                                <  2:13948525/96‑1 (MQ=255)
                 cGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTc                                                                            <  2:2774793/96‑1 (MQ=255)
                 cGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTc                                                                            >  2:3854456/1‑96 (MQ=255)
                    aaTATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAg                                                                         >  1:5753242/1‑96 (MQ=255)
                    aaTATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAg                                                                         <  1:3901598/96‑1 (MQ=255)
                    aaTATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGCTGCGTGACAGGCGGGACGGGAACCAGTTGCAg                                                                         >  1:687545/1‑96 (MQ=255)
                     atatCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAACGCTGGCTCACCCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGa                                                                        <  2:11692192/96‑1 (MQ=255)
                      tatCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGAt                                                                       >  1:8050355/1‑96 (MQ=255)
                       atCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATg                                                                      >  2:10499023/1‑96 (MQ=255)
                        tCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGc                                                                     >  2:1010581/1‑96 (MQ=255)
                         cGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACCGGCGGGAAGGGAACCAGTTCCAGATGct                                                                    >  2:6866113/1‑95 (MQ=255)
                          gagaGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGt                                                                   >  2:7037661/1‑96 (MQ=255)
                          aagagTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCTGGACGGGAACCAGTTCCCGATGCGt                                                                   >  1:11414656/2‑96 (MQ=255)
                            gagTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCa                                                                 >  2:14268532/1‑96 (MQ=255)
                            gagTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCa                                                                 >  1:2074151/1‑96 (MQ=255)
                             ggTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGCCAt                                                                >  1:5416444/2‑96 (MQ=255)
                              gTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCATTTCAAGCTGCGTCAtt                                                               >  1:1599195/1‑96 (MQ=255)
                                gATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGc                                                             <  1:3585936/96‑1 (MQ=255)
                                gATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGc                                                             >  2:13361155/1‑96 (MQ=255)
                                 atatTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGGTCCAGATGCGTCATTGCg                                                            >  2:12516718/1‑96 (MQ=255)
                                     tGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGGACCAGTTCCAGATGCGTCATTGCGGCaa                                                        >  2:13524535/1‑96 (MQ=255)
                                     tGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGcca                                                        <  1:10636279/96‑3 (MQ=255)
                                         cAGCGCAACGGGTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGGGGCAACCTc                                                    >  2:11273953/1‑96 (MQ=255)
                                           gcgcAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTcac                                                  <  1:8682432/96‑1 (MQ=255)
                                            cgcAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTcacc                                                 <  2:11813877/96‑1 (MQ=255)
                                             gcAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTcacca                                                <  2:2293778/96‑1 (MQ=255)
                                             gcAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTcacca                                                >  1:12594602/1‑96 (MQ=255)
                                              cAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTcaccac                                               <  1:4734850/96‑1 (MQ=255)
                                                 cGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAg                                            <  2:7548674/96‑1 (MQ=255)
                                                 cGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAg                                            >  2:8954510/1‑96 (MQ=255)
                                                 aggTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAg                                            >  1:13805711/2‑96 (MQ=255)
                                                   gTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGGACCAGGTCCAGATGCGTCATTGCGGCAACATCACCACGAGgt                                          >  1:6549249/1‑96 (MQ=255)
                                                   gTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCATATGGGGCATTGGGGCAACCGCACCCCGAGgt                                          >  2:10796696/1‑96 (MQ=255)
                                                   gTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGgt                                          <  1:12302584/96‑1 (MQ=255)
                                                   gTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCCCACCACGAGgt                                          >  1:10843048/1‑96 (MQ=255)
                                                    tttttCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGgtc                                         >  2:8833680/1‑96 (MQ=255)
                                                    tttttCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGgtc                                         <  1:13486628/96‑1 (MQ=255)
                                                    tttttCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGgtc                                         <  1:4482500/96‑1 (MQ=255)
                                                      tttCCCTAATGCTGGCCCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGgtcgt                                       <  1:6426581/96‑1 (MQ=255)
                                                        tCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCa                                     >  2:6282056/1‑96 (MQ=255)
                                                        tCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCa                                     <  1:5989212/96‑1 (MQ=255)
                                                         acATAATGCTGGCCCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAg                                    <  2:12443941/95‑1 (MQ=255)
                                                          cATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCCCCACGAGGTCGTCAgg                                   <  2:2078670/96‑1 (MQ=255)
                                                            tAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGcc                                 >  1:2467029/1‑96 (MQ=255)
                                                            tAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGGCGTCAGGcc                                 >  1:2189948/1‑96 (MQ=255)
                                                             aaTGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGccg                                <  1:4213930/96‑2 (MQ=255)
                                                              aTGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCACCCTCACCACGAGGTCGTCAGGCCAc                               <  2:5893509/96‑1 (MQ=255)
                                                              aTGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCAc                               >  1:1792888/1‑96 (MQ=255)
                                                              aTGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCAc                               >  2:10385097/1‑96 (MQ=255)
                                                              aTGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGGCAGGCCAc                               >  2:5354362/1‑96 (MQ=255)
                                                               tGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACg                              >  2:1838069/1‑96 (MQ=255)
                                                               tGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGGCGTCAGGCCACg                              >  1:14078684/1‑96 (MQ=255)
                                                                 cTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGGCGTCAGGCCACGGa                            >  2:4007095/1‑96 (MQ=255)
                                                                      tCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACGAGTTCCAGATGCGTCATTGCGGCAACATCACCATGAGGACGTCAGGCCACGGAGGttc                       >  1:9302079/1‑96 (MQ=255)
                                                                      tCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGttc                       >  2:11465623/1‑96 (MQ=255)
                                                                      tCACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGttc                       >  2:4612889/1‑96 (MQ=255)
                                                                       cccgcccgccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGttct                      <  1:8297125/94‑1 (MQ=255)
                                                                       cACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGgtct                      >  2:8320284/1‑96 (MQ=255)
                                                                       cACGCCCGCCAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGACGTCAGGCCACGGAAGttct                      >  1:9699446/1‑96 (MQ=255)
                                                                          gcccgccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCGTTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGCAGTACttca                   >  2:13141119/1‑96 (MQ=255)
                                                                          gcccgccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCCCCACGAGGTCGTCAGGCCACGGAAGTTCttca                   <  2:7629737/96‑1 (MQ=255)
                                                                           cccgccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCttcat                  <  2:4463373/96‑1 (MQ=255)
                                                                            ccgccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCttcatt                 >  1:5026218/1‑96 (MQ=255)
                                                                             cgccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCttcattc                <  2:12882354/96‑1 (MQ=255)
                                                                             cgccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCttcattc                <  2:3173378/96‑1 (MQ=255)
                                                                              gccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCCCCACGAGGTCGTCAGGCCACGGAAGTTCttcattca               <  2:5040727/96‑1 (MQ=255)
                                                                               ccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCAc              <  1:7121207/96‑1 (MQ=255)
                                                                               ccAGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCAc              <  2:6446421/96‑1 (MQ=255)
                                                                                 aGTTGCGCGACAGGCGGGAGGGGAACCAGGTCCAGATGCGTCCTTGCGGCAGCCTCACCCCGAGGTCGTCAGGCCACGGAAGTTCTTCATTCAccc            <  1:1430206/96‑1 (MQ=255)
                                                                                 aGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCAccc            <  1:13627558/96‑1 (MQ=255)
                                                                                 aGTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCAacc            >  1:3020950/1‑96 (MQ=255)
                                                                                  gTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCg           <  2:9470639/96‑1 (MQ=255)
                                                                                  gTTGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCg           <  1:8900956/96‑1 (MQ=255)
                                                                                   ttGCGCGACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCCCCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGc          <  2:979566/96‑1 (MQ=255)
                                                                                      cgcgACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCAcc       <  1:3350209/96‑1 (MQ=255)
                                                                                        cgACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCa     <  1:1507193/96‑1 (MQ=255)
                                                                                         gACAGGCGGGACGGGANCCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCAc    <  1:8536460/96‑1 (MQ=255)
                                                                                         gACAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTAACCCGCACCCAc    >  2:12017200/1‑96 (MQ=255)
                                                                                           cAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGc  <  2:8147600/96‑1 (MQ=255)
                                                                                           cAGGCGGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGc  >  2:7865435/1‑96 (MQ=255)
                                                                                                |                                                                                          
CCGACCATACAGCGGGCCGGAATATCGAGAGTGATATTGTTCAGCGCAACGGTTTTTCCATAATGCTGGCTCACGCCCGCCAGTTGCGCGACAGGCGGACGGGAACCAGTTCCAGATGCGTCATTGCGGCAACCTCACCACGAGGTCGTCAGGCCACGGAAGTTCTTCATTCACCCGCACCCACGC  >  NC_000913/3627045‑3627230

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: