Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 3,957,124 | +G | intergenic (+58/+26) | ilvC → / ← ppiC | ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,957,123 | 1 | . | G | 99.0% | 1000.2 / 1.8 | 298 | intergenic (+57/+27) | ilvC/ppiC | ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C |
Reads supporting (aligned to +/- strand): ref base . (1/2); new base G (83/212); total (84/214) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.43e-01 |
Only 100 of 330 total aligned reads displayed.
ATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGA‑‑CTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑A‑GCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGC > NC_000913/3957031‑3957213 | atGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGATAAAACACTCA‑A‑g < 1:1381636/96‑1 (MQ=25) tGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑A‑Gc < 1:8803740/96‑1 (MQ=25) cAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑A‑ggcct < 1:10027268/96‑5 (MQ=21) gATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTtc < 2:2325661/96‑1 (MQ=21) gATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACCCTCA‑AGGCCTtc < 1:5095813/96‑1 (MQ=18) atatGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTtct < 2:4796075/96‑1 (MQ=21) atatGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTtct < 2:14345264/96‑1 (MQ=21) atatGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCATG‑GCCTtct < 2:12967849/96‑1 (MQ=18) atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTcc < 2:12143401/96‑1 (MQ=21) atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTcc < 2:2247237/96‑1 (MQ=21) atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCT‑‑CACACAGGGAGAGGGAGGAAACACACA‑AGGCCTTCTcc > 1:13719036/1‑96 (MQ=18) tGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGATGGAGAAAACACTCA‑AGGCCTTCTCCt < 1:6718646/96‑1 (MQ=21) tGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCt < 1:11710122/96‑1 (MQ=21) gTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGaa < 2:11130163/96‑1 (MQ=21) tGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGcc > 1:6891100/1‑96 (MQ=21) tGCTGTTGCGGGTTAAGTGCGCGCTGATCCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGcc < 2:2756957/96‑1 (MQ=21) cTGTTGCGGGTTAGGTGCGCGCTGATGCCCCCACCCCGACCCCCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCtt < 1:4679065/96‑1 (MQ=18) cTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCtt < 2:3349773/96‑1 (MQ=21) tGTTGCTGGTTGAGTGCGCCATGATGCCCTCACGCCGACCCTCG‑‑CCCACCGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTg < 1:5901328/96‑1 (MQ=16) tGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTa < 2:5735734/96‑1 (MQ=21) tGCGGGTTAAGTGCGCGCTGATGACCTCCCCCCCACCCTCT‑‑CCCACCGGGGGGGGGGGGAAACACTAA‑AGGGCTTCTCCCGGAGAAGGCCTTGCTa > 2:6878191/1‑96 (MQ=255) ggCGGGTTAAGTGCCCGCCCCCCCCCTCCCCCCGC‑‑CCCCCCCCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTa < 2:6532413/95‑1 (MQ=12) gCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTAt < 1:3662493/96‑1 (MQ=21) cGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTAtt < 1:14230554/96‑1 (MQ=21) cGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTAtt < 2:5137461/96‑1 (MQ=21) cGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTAtt < 1:211763/96‑1 (MQ=21) ttAAGTGCGCGCTGATGCCCTCCCCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAgct < 1:8083086/96‑3 (MQ=18) tAAGTGCGCGCTGATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTg < 2:1196924/96‑1 (MQ=21) aaGTGCGCGCTGTTGCATTCACCACGACCCTAT‑‑CCCACAGGGAGAGGGAGACAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGtttc < 1:2981485/96‑3 (MQ=16) aGTGCGCGCTGATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCg < 1:1027651/96‑1 (MQ=21) gTGCGCGCTGATGCCCTCACCCCGATCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCgg < 1:10790903/96‑1 (MQ=21) gTGCGCGCTAATGCCCTCACCCCGACCCTCT‑‑CACAAAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCgg < 1:2613476/96‑1 (MQ=21) cgcgcTGATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACCCTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGtcc < 1:11048137/96‑3 (MQ=18) gcgcTGATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACa < 2:1856173/96‑1 (MQ=21) gcgcTGATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACa < 1:12822294/96‑1 (MQ=21) gcgcTGATGCCCTCACCCCGACCCTCG‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACa < 1:8387325/96‑1 (MQ=21) cTGACGCCCTCACCCCGACCCTCC‑‑CCCAGAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAggt < 1:11305490/96‑3 (MQ=21) tGAAGCCCTCCCCCCGCCCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCAc < 1:9882781/96‑1 (MQ=21) gATGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCAcc < 2:5548035/96‑1 (MQ=25) aTGCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCt < 2:12516809/96‑1 (MQ=25) gCCCTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGATATTAGTTGCGGTACAGCACCtca < 1:14328024/96‑3 (MQ=25) ccTCACCCCGACCCTCT‑‑CCCACAGGGGGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGATAAGGCCTTGCTATTAGTTGCGGTACATCACCTTAat > 2:6422639/1‑96 (MQ=25) ccTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAat < 2:9381891/96‑1 (MQ=37) cTCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAatg > 1:13317051/1‑96 (MQ=37) tCACCCCGACCCTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAatga < 1:7462753/96‑1 (MQ=37) gaccctct‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGata < 1:10524230/92‑1 (MQ=39) gaccctct‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGata < 2:7128924/92‑1 (MQ=39) accctct‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGatat > 2:3063846/4‑96 (MQ=255) accctct‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGatat > 2:1066039/4‑96 (MQ=255) ccctct‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATc < 2:8775673/94‑1 (MQ=255) ccctct‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGGACAGCACCTTAATGATGTGATATc > 1:1870661/3‑96 (MQ=39) cctct‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATcc > 1:6388970/2‑96 (MQ=255) cctct‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATcc > 2:3831738/2‑96 (MQ=255) ctct‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCg < 1:9071258/96‑1 (MQ=255) ctct‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCg < 1:12316600/96‑1 (MQ=255) ct‑‑cCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGaa > 2:4195450/1‑96 (MQ=255) ct‑‑cCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGaa < 1:765959/96‑1 (MQ=255) ct‑‑cCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGaa < 2:1370748/96‑1 (MQ=255) t‑‑cCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAAc < 1:999357/96‑1 (MQ=255) t‑‑cCCACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAAc > 1:337638/1‑96 (MQ=255) cccccGCAGGGCGAGGGAGAACACACTCA‑AGGCCTTCTCCTGGAGCAGGCCTTGCTATTAGTTGCGGTCCAGCCCCTTAATGATGTGATATCCCaa < 1:97828/94‑1 (MQ=255) cccACAGGGAGAGGGAGAAAACCCTCA‑AGGCTTTCTCCTGGAGAAGG‑CTTGGCAATAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTg < 2:7991805/96‑1 (MQ=255) cccACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACt < 1:13666612/96‑1 (MQ=255) ccACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTg < 2:1320707/96‑1 (MQ=255) ccACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTg < 2:10989591/96‑1 (MQ=255) ccACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTg > 2:153567/1‑96 (MQ=255) ccACAGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTg < 1:8014078/96‑1 (MQ=255) cacaGGGAGAGGGAGAAAACGCTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTgg < 1:3148199/96‑1 (MQ=255) cacaGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTgg < 2:2099070/96‑1 (MQ=255) caGGGAGAGGGAGAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgt < 2:6333069/96‑1 (MQ=255) agggagagggagAAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgtg > 1:5454640/1‑96 (MQ=255) gggagagggagtACACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgtgt < 1:2735477/96‑1 (MQ=255) gggagagggagaAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgtgt < 2:8505607/96‑1 (MQ=255) ggagagggagaAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGtgtg > 2:764164/1‑96 (MQ=255) ggagagggagaAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGtgtg < 2:11544618/96‑1 (MQ=255) agagggagaAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCa < 1:3113239/96‑1 (MQ=255) agagggagaAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCa < 1:4973674/96‑1 (MQ=255) gagggagaAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAg < 2:8276439/96‑1 (MQ=255) gagggagaAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAg < 2:9290385/96‑1 (MQ=255) gagggagaAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAg > 2:13495080/1‑96 (MQ=255) agggagaAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGagcagc > 1:159821/1‑96 (MQ=255) agggagaAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGc > 2:9035796/1‑96 (MQ=255) agggagaAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTATGCAGc > 2:12798292/1‑96 (MQ=255) gggagaAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCg < 1:9271538/96‑1 (MQ=255) ggagaAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCgg > 1:4103265/1‑96 (MQ=255) agaAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGc < 2:3645038/96‑1 (MQ=255) agaAAACACTCA‑AGGCCTCCTCCTGGCGAAGGCCTTGCTATTAGTTGCGGTACAGCTCCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGc < 2:2388209/96‑1 (MQ=255) gaAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGcc < 1:11231873/96‑1 (MQ=255) gaAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGcc > 2:623019/1‑96 (MQ=255) gaAAACACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGcc < 1:12662139/96‑1 (MQ=255) gaAAACACTCA‑AGGCCTTCTCCTAGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGcc < 1:10062857/96‑1 (MQ=255) acacacTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCgg > 1:11472122/3‑96 (MQ=255) aaaCACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCgg < 2:13317051/96‑1 (MQ=255) aaaCACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGAGCGCAGCGGGCCgg > 1:4503713/1‑96 (MQ=255) aaCCCTCA‑AGGCCTTCTTCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt < 2:540669/96‑1 (MQ=255) aaCACTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt < 2:14061162/96‑1 (MQ=255) acacTCA‑CGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTc < 1:5702003/96‑1 (MQ=255) acacTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTc < 2:3201011/96‑1 (MQ=255) acTCA‑AGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCgg > 1:9446859/1‑96 (MQ=255) cTCA‑AGGCCTCCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGc > 1:7728635/1‑96 (MQ=255) | ATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGA‑‑CTCT‑‑CCCACAGGGAGAGGGAGAAAACACTCA‑A‑GCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGC > NC_000913/3957031‑3957213 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |