BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,005,601	+C	coding (237/282 nt)	b4568 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,005,600	1	.	C	99.8%	1947.9 / NA	497	G79A (GGC→GCC)	b4568	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/0); major base C (266/230); minor base A (1/0); total (267/230)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 540 total aligned reads displayed.

CGGCGTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGG‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCG  >  NC_000913/4005505‑4005690

cagcgTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTgg                                                                                             >  1:11093348/3‑96 (MQ=255)

 ggcgTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGG‑c                                                                                           >  1:12977951/1‑96 (MQ=255)

   cgTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGG‑cct                                                                                         <  1:9424361/96‑3 (MQ=255)

   cgTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGGGG‑cct                                                                                         >  2:4061051/1‑94 (MQ=255)

     tAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGG‑cctgt                                                                                       <  2:1297237/96‑5 (MQ=255)

        tGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTAtc                                                                                     >  2:338526/1‑96 (MQ=255)

        tGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTAtc                                                                                     >  2:7208041/1‑96 (MQ=255)

        tGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTAtc                                                                                     <  1:6960126/96‑1 (MQ=255)

        tGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTAtc                                                                                     <  1:8731939/96‑1 (MQ=255)

        tGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTAtc                                                                                     >  1:6642987/1‑96 (MQ=255)

         ggTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTAtct                                                                                    >  1:8636615/1‑96 (MQ=255)

          gTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTAtctc                                                                                   >  1:13357622/1‑96 (MQ=255)

          gTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTAtctc                                                                                   >  1:6347830/1‑96 (MQ=255)

          gTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTAtctc                                                                                   >  2:1743574/1‑96 (MQ=255)

           tttGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATctct                                                                                  <  1:2908840/96‑1 (MQ=255)

              gggCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGTATACGCTGATTATGGTGGGCGGTGGCCTGTATCTctgct                                                                               <  2:1352300/96‑1 (MQ=255)

              gggCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTctgct                                                                               <  2:8244297/96‑1 (MQ=255)

                 cTGGGATTGCGCTGCGTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGTGGGTGGCCTTCATCTCTGCTGGa                                                                            >  1:12324606/1‑96 (MQ=255)

                  tcggATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGGGGCCTGTATCTCTGCTGGAt                                                                           >  1:3408224/3‑96 (MQ=255)

                  tGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGAt                                                                           >  2:6470028/1‑96 (MQ=255)

                  tGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGAt                                                                           >  2:3084973/1‑96 (MQ=255)

                  tGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGAt                                                                           >  1:13167150/1‑96 (MQ=255)

                    ggATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATgg                                                                         >  1:7350768/1‑96 (MQ=255)

                         gcgcTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGGTGGGTTAc                                                                    >  2:4933981/1‑96 (MQ=255)

                          cgcTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTAcc                                                                   <  2:13790384/96‑1 (MQ=255)

                           gctgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCa                                                                  >  1:4977729/1‑96 (MQ=255)

                           gctgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCa                                                                  >  1:5771893/1‑96 (MQ=255)

                           gctgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCa                                                                  <  1:7171179/96‑1 (MQ=255)

                              gctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGAt                                                               >  2:10924287/1‑96 (MQ=255)

                                ttGGCCTGCATTTGATTATCGGAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGc                                                             >  1:14231010/1‑96 (MQ=255)

                                  ggCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGGTTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTa                                                           >  2:6694641/1‑96 (MQ=255)

                                   gCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAc                                                          <  1:835385/96‑1 (MQ=255)

                                   gCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTAc                                                          >  1:11603629/1‑96 (MQ=255)

                                   gCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGCTACCAGATGCTAc                                                          <  1:13454542/96‑1 (MQ=255)

                                    ccTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACg                                                         <  2:13941475/96‑1 (MQ=255)

                                     cTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgt                                                        <  1:8048397/96‑1 (MQ=255)

                                      tGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTCTGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtg                                                       <  1:11900484/96‑1 (MQ=255)

                                      tGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtg                                                       >  1:2283884/1‑96 (MQ=255)

                                         aTTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtggtg                                                    >  2:7714893/1‑96 (MQ=255)

                                          tttGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGc                                                   >  2:3787877/1‑96 (MQ=255)

                                           ttGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATATCTGCTGGATGGGTTACCAGATGCTACGTGGTGCa                                                  >  1:5543678/1‑96 (MQ=255)

                                            tGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCAc                                                 >  1:12724223/1‑96 (MQ=255)

                                             gATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACt                                                <  1:9658279/96‑1 (MQ=255)

                                             gATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACt                                                <  2:14296752/96‑1 (MQ=255)

                                             gATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACt                                                >  1:7612155/1‑96 (MQ=255)

                                             gATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGATACGTGGTGCAca                                                <  1:13888834/96‑2 (MQ=255)

                                              aTTATCGAAAAAATGGCCTGGCTTCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTCCCAGATGCTACGTGGTGCACTg                                               <  2:6064332/96‑1 (MQ=255)

                                              aTTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCGCTg                                               <  2:12583165/96‑1 (MQ=255)

                                              aTTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTg                                               <  2:8733349/96‑1 (MQ=255)

                                               ttATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGa                                              >  1:1725093/1‑96 (MQ=255)

                                               ttATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGa                                              <  2:11299804/96‑1 (MQ=255)

                                               ttATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGa                                              <  2:11035744/96‑1 (MQ=255)

                                                gaTCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaa                                             >  1:11347451/2‑96 (MQ=255)

                                                   cGAAATAATGGCCTGGCTGCATAAGATGATTATGGTGGGCGGTGGCCTGTATCCCTGCTGGATGGGTTACCAGATGCTATGTGGTGCACTGaaaaa                                          <  1:10378988/96‑1 (MQ=255)

                                                   cGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaaaaa                                          <  1:2509201/96‑1 (MQ=255)

                                                    ggaaaaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGaaaaaa                                         >  1:10143519/3‑96 (MQ=255)

                                                       aaaaTGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAagag                                      >  2:8520989/1‑96 (MQ=255)

                                                         aaTGGCCTGGCTGCATCCGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAagagcc                                    <  1:7766023/96‑3 (MQ=255)

                                                           tGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCgg                                  >  1:19338/1‑96 (MQ=255)

                                                           tGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCgg                                  >  1:4289653/1‑96 (MQ=255)

                                                             gCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGtt                                <  2:7583137/96‑1 (MQ=255)

                                                              ccTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGGGGttt                               >  2:10205388/1‑96 (MQ=255)

                                                              ccTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGttt                               >  2:10656695/1‑96 (MQ=255)

                                                              ccTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGttt                               >  1:5932031/1‑96 (MQ=255)

                                                               cTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTc                              <  1:27210/96‑1 (MQ=255)

                                                               cTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTc                              >  1:3623486/1‑96 (MQ=255)

                                                                tGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCt                             <  2:4327649/96‑1 (MQ=255)

                                                                tGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCt                             <  1:13583920/96‑1 (MQ=255)

                                                                 ggCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTg                            >  1:4080420/1‑96 (MQ=255)

                                                                  gCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGc                           <  1:9204694/96‑1 (MQ=255)

                                                                   cTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCa                          <  2:9861643/96‑1 (MQ=255)

                                                                     gCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAcc                        >  2:9286094/1‑96 (MQ=255)

                                                                      cATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCt                       >  1:3928916/1‑96 (MQ=255)

                                                                       aTACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCCCCTg                      <  2:7821559/96‑1 (MQ=255)

                                                                         aCGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCTCTGAAAAAAGAGGCGGGTTCTGCACCTgcg                    >  2:14134283/1‑96 (MQ=255)

                                                                           gCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTgcgtc                  <  1:10570168/96‑3 (MQ=255)

                                                                             tGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcac                >  1:12134046/1‑96 (MQ=255)

                                                                             tGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcac                >  1:3790977/1‑96 (MQ=255)

                                                                             tGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcac                <  1:6062689/96‑1 (MQ=255)

                                                                              gATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcaca               >  2:2315786/1‑96 (MQ=255)

                                                                              gATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcaca               >  2:277851/1‑96 (MQ=255)

                                                                               aTTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAg              >  2:13325021/1‑96 (MQ=255)

                                                                               aTTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAg              <  2:5430514/96‑1 (MQ=255)

                                                                                ttATGGTGGGCGGTGGCCTGTATCTCTGCTGTATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAgg             <  1:1554412/96‑1 (MQ=255)

                                                                                ttATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAgg             <  2:12136495/96‑1 (MQ=255)

                                                                                 tATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGt            <  2:5159953/96‑1 (MQ=255)

                                                                                  aTGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTc           <  1:8895506/96‑1 (MQ=255)

                                                                                  aTGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTc           >  1:3241168/1‑96 (MQ=255)

                                                                                  aTGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTc           <  2:9001233/96‑1 (MQ=255)

                                                                                    ggtggtCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGa         <  2:12729794/96‑1 (MQ=255)

                                                                                    ggtggGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGa         <  1:9949602/96‑1 (MQ=255)

                                                                                    ggtggGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGa         <  2:11809769/96‑1 (MQ=255)

                                                                                     gtggGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAg        >  1:5159727/1‑96 (MQ=255)

                                                                                      tggGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGc       <  1:14052780/96‑1 (MQ=255)

                                                                                       gggCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCt      <  2:11530591/96‑1 (MQ=255)

                                                                                        ggCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTg     >  2:4493495/1‑96 (MQ=255)

                                                                                        ggCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTg     >  2:8886556/1‑96 (MQ=255)

                                                                                         gCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTgg    <  1:3084973/96‑1 (MQ=255)

                                                                                          cGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGc   <  2:5771893/96‑1 (MQ=255)

                                                                                           ggTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCg  >  2:2011979/1‑96 (MQ=255)

CGGCGTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGG‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCG  >  NC_000913/4005505‑4005690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`