BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,008,375	+A	coding (458/516 nt)	b4555 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,008,372	1	.	A	99.5%	809.5 / ‑3.3	203	coding (455/516 nt)	b4555	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (1/0); new base A (67/135); total (68/135)
Fisher's exact test for biased strand distribution p-value = 3.35e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.01e-01

Only 100 of 280 total aligned reads displayed.

GCCGCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTC‑AAA‑GGCCATGCGCTGGAAG‑GCTGGCG‑‑‑‑AACT‑G‑GCTACAG‑CTGAAGGATT‑G‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAA  >  NC_000913/4008277‑4008453

 ccGCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GGTTC‑a                                                                                               >  2:1612057/1‑96 (MQ=255)

 ccGCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGGGATGGCGGGC‑GGC‑GGTTC‑a                                                                                               >  2:864130/1‑96 (MQ=255)

  cGCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTC‑aa                                                                                              <  2:6431775/96‑1 (MQ=255)

  cGCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGAGGGCGGGG‑GGC‑GTGTC‑aa                                                                                              >  1:6760876/1‑96 (MQ=255)

   gCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGG‑GGG‑GGTTC‑taa                                                                                             >  1:1383836/1‑96 (MQ=255)

    cTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTC‑aaaa                                                                                            >  2:5889603/1‑95 (MQ=255)

    cTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTC‑aaaa                                                                                            <  1:3666553/96‑2 (MQ=255)

     tGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGG‑GGG‑GTTTC‑aaaag                                                                                           >  1:2413129/1‑94 (MQ=255)

     tGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGG‑GGC‑GTTTC‑caaag                                                                                           >  1:9728989/1‑94 (MQ=255)

     tGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GGTTC‑aaaag                                                                                           >  2:2381024/1‑94 (MQ=255)

     tGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GGTTC‑aaaaa                                                                                           >  1:7485192/1‑94 (MQ=255)

       gAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTC‑aaaaggc                                                                                         <  2:1408604/96‑5 (MQ=255)

       gAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGGCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGG‑GGC‑GGTTCTAAA‑GGc                                                                                         >  1:2121545/1‑96 (MQ=255)

        aGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGGG‑GTTTA‑AAA‑gggc                                                                                        >  2:7165106/1‑94 (MQ=255)

         gCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAATCTGTCTGGAAGTGATGGCGGAC‑GGC‑GTTTCAAAA‑GGCCa                                                                                       <  1:10135664/96‑1 (MQ=255)

         gCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCa                                                                                       <  1:1274740/96‑1 (MQ=255)

          cAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCAt                                                                                      >  2:4189153/1‑96 (MQ=255)

           aGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGCGGTTTA‑AAA‑AGCCaag                                                                                     >  1:2926582/1‑94 (MQ=255)

           aGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATg                                                                                     <  1:10470528/96‑1 (MQ=255)

           aGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATg                                                                                     <  1:4609194/96‑1 (MQ=255)

            ggCGATTAAGGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTCACCCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATgc                                                                                    <  1:4266848/96‑1 (MQ=255)

             gCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATgcg                                                                                   >  1:5640901/1‑96 (MQ=255)

              cGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATgcgc                                                                                  <  1:5449163/96‑1 (MQ=255)

                aTTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGG‑CGC‑GGTTCAAAA‑GGCCATGCGCTg                                                                                >  1:12499391/1‑96 (MQ=255)

                aTTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTg                                                                                >  1:8611170/1‑96 (MQ=255)

                aTTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTg                                                                                <  1:9812418/96‑1 (MQ=255)

                 ttAATGCTCGTTGGGGCGATCGCGTCATCGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTgg                                                                               <  1:4450409/96‑1 (MQ=255)

                 ttAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑AGCCATGCGCTgg                                                                               >  2:2919488/1‑96 (MQ=255)

                 taaaCGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGGCATGCGCTgg                                                                               >  1:10702675/3‑96 (MQ=255)

                  tAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GGTTCAAAA‑GGGCACGCGCTGGa                                                                              >  1:5113/1‑96 (MQ=255)

                   aaCGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGaa                                                                             <  2:9786110/96‑1 (MQ=255)

                    aCGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAg                                                                            <  2:1752289/96‑1 (MQ=255)

                     cGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGCGGTTGA‑AAA‑GGGCATGCGCTGGAAgt                                                                           >  2:7453921/1‑95 (MQ=255)

                      tcTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAgcg                                                                          <  2:8346602/95‑3 (MQ=255)

                      gCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAgcg                                                                          <  2:4574209/96‑3 (MQ=255)

                      gCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAgcg                                                                          <  1:1040211/96‑3 (MQ=255)

                      gCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GGTTCAAAA‑GGCCATGCGCTGGAAgcg                                                                          >  1:4841377/1‑94 (MQ=255)

                       cTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGGCATGCGCTGGAAgcgg                                                                         >  1:7679697/1‑93 (MQ=255)

                       cTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAgcgg                                                                         <  2:5164146/96‑4 (MQ=255)

                       cTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GGTTC‑AAACAGCCCTGCGCTGGAAgccg                                                                         >  1:6891786/1‑93 (MQ=255)

                        tCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGG‑GTTTCAAAA‑GGCCATGGGGTGGAAgcggg                                                                        >  2:6155104/1‑92 (MQ=255)

                        tCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAgcggt                                                                        <  2:13648098/96‑5 (MQ=255)

                        tCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAgcggt                                                                        <  2:14255212/96‑5 (MQ=255)

                        tCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAgcggt                                                                        <  2:13225147/96‑5 (MQ=255)

                        tCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAgcggt                                                                        <  2:5442628/96‑5 (MQ=255)

                          gTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAg                                                                            >  2:2524495/1‑90 (MQ=255)

                             ggggCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCAAGTGCTGGAAGCGGTGGCG‑‑‑‑a                                                               >  2:3025377/1‑96 (MQ=255)

                                gCGAGCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑aaga                                                            <  2:12549186/96‑3 (MQ=255)

                                  gATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑aagaaa                                                          <  2:403814/96‑5 (MQ=255)

                                                                  cTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGtt                            <  2:3761128/96‑1 (MQ=255)

                                                                    gTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGtttg                          <  2:14390484/96‑3 (MQ=255)

                                                                    gTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGtttg                          <  2:5241731/96‑3 (MQ=255)

                                                                    gTCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGtttg                          >  2:10400554/1‑94 (MQ=255)

                                                                    gTCTGGAAGTGAGGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGtttg                          <  1:6083090/96‑3 (MQ=255)

                                                                     tCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGtttgg                         <  2:9061588/96‑4 (MQ=255)

                                                                     tCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGtttgg                         <  2:8962905/96‑4 (MQ=255)

                                                                     tCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGtttgg                         >  2:7833193/1‑93 (MQ=255)

                                                                     tCTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGtttgg                         >  1:3449894/1‑93 (MQ=255)

                                                                      cTGGATGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGtttggt                        <  1:4762551/96‑5 (MQ=255)

                                                                      cTGGAAGTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGtttggt                        <  2:7567338/96‑5 (MQ=255)

                                                                            gTGATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACggg                  <  2:10822895/96‑1 (MQ=255)

                                                                              gATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGAt                <  2:6878174/96‑1 (MQ=255)

                                                                              gATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGAt                <  2:1225594/96‑1 (MQ=255)

                                                                              gATGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGAGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGAt                <  2:1017290/96‑1 (MQ=255)

                                                                               aTGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATg               <  1:13060395/96‑1 (MQ=255)

                                                                                tGGCGGGC‑GGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGa              >  2:4463195/1‑96 (MQ=255)

                                                                                 ggcgggc‑gGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGACGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGTTGaa             >  1:12912062/1‑96 (MQ=255)

                                                                                 ggcgggc‑gGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTCCAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGaa             >  2:9543973/1‑96 (MQ=255)

                                                                                 ggcgggc‑gGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGaa             <  1:4360679/96‑1 (MQ=255)

                                                                                 ggcgggc‑gGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGaa             <  1:13138591/96‑1 (MQ=255)

                                                                                 ggcgggc‑gGC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGaa             <  1:13237122/96‑1 (MQ=255)

                                                                                  gcgggc‑ggC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAac            <  2:9643586/96‑1 (MQ=255)

                                                                                  gcgggc‑ggC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAac            <  1:1573443/96‑1 (MQ=255)

                                                                                   cgggc‑ggC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAacg           <  1:13978146/96‑1 (MQ=255)

                                                                                    gggc‑ggC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAGGGATTGG‑ATTGCTTTTGGTGACGGGATGAacga          >  1:12230156/1‑96 (MQ=255)

                                                                                    gggc‑ggC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAacga          >  1:6278348/1‑96 (MQ=255)

                                                                                    gggc‑ggC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAacga          >  2:6681137/1‑96 (MQ=255)

                                                                                    gggc‑ggC‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAacga          >  2:13250770/1‑96 (MQ=255)

                                                                                     ggc‑ggc‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAacgac         >  2:2688130/1‑96 (MQ=255)

                                                                                     ggc‑ggc‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAacgac         >  1:12862918/1‑96 (MQ=255)

                                                                                     ggc‑ggc‑GTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAacgac         >  1:4300846/1‑96 (MQ=255)

                                                                                     ggc‑ggc‑GTATCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACT‑GAGCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAacgtc         <  1:7369695/96‑3 (MQ=255)

                                                                                      gc‑ggc‑gTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAacgacg        <  2:12997738/96‑1 (MQ=255)

                                                                                      gc‑ggc‑gTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAacgacg        >  1:9124624/1‑96 (MQ=255)

                                                                                       c‑ggc‑gTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAAcgccgc       <  1:781157/96‑1 (MQ=255)

                                                                                       c‑ggc‑gTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGc       <  1:934936/96‑1 (MQ=255)

                                                                                       c‑ggc‑gTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGc       >  1:7288324/1‑96 (MQ=255)

                                                                                       c‑ggc‑gTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGc       >  2:7099164/1‑96 (MQ=255)

                                                                                         ggc‑gTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGcc      <  1:3236505/96‑1 (MQ=255)

                                                                                         ggc‑gTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGcc      >  1:2674379/1‑96 (MQ=255)

                                                                                         ggc‑gTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGcc      <  2:2102374/96‑1 (MQ=255)

                                                                                         ggc‑gTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GATACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGcc      <  1:11448052/96‑1 (MQ=255)

                                                                                         ggc‑gTTTCAAAA‑GGCCATGCGCTGGAAGCGGGGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGcc      >  2:1886487/1‑96 (MQ=255)

                                                                                           c‑gTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGa    <  2:11320077/96‑1 (MQ=255)

                                                                                             gTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGaa   <  1:10187737/96‑1 (MQ=255)

                                                                                             gTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGaa   <  2:5625116/96‑1 (MQ=255)

                                                                                             gTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGaa   <  2:3393939/96‑1 (MQ=255)

                                                                                             gTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGaa   <  1:711031/96‑1 (MQ=255)

                                                                                             gTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCCGaa   >  1:11103465/1‑96 (MQ=255)

                                                                                             gTTTCAAAA‑GGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCCTGAAGGATT‑GTATTGCGTTTGGTGACGGGATGAACGACGCAGaa   <  2:10113205/96‑1 (MQ=255)

GCCGCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGC‑GGC‑GTTTC‑AAA‑GGCCATGCGCTGGAAG‑GCTGGCG‑‑‑‑AACT‑G‑GCTACAG‑CTGAAGGATT‑G‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAA  >  NC_000913/4008277‑4008453

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`