BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,008,404	+G	coding (487/516 nt)	b4555 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,008,402	1	.	G	99.5%	726.5 / ‑3.5	185	coding (485/516 nt)	b4555	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/1); new base G (82/102); total (82/103)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.72e-01

Only 100 of 188 total aligned reads displayed.

CTGTCTGGAAGTGATGGCGGGCGGCGTTTC‑AA‑AGGCCATGCGCTGGAAG‑GCTGGCG‑‑‑‑AACT‑G‑GCTACAG‑C‑TGAAGGATT‑G‑ATTGCG‑T‑T‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCG  >  NC_000913/4008343‑4008461

cTGTCTGGAAGTGATGGCGGGCGGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑t‑t                                    <  2:3761128/96‑1 (MQ=255)

 tGTCTGGAAGTGATGGCGGGCGGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑t‑tt                                   <  1:5021437/96‑2 (MQ=255)

 tGTCTGGAAGTGATGGCGGGCGGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑t‑tt                                   <  2:2926582/96‑2 (MQ=255)

 tGTCTGGAAGTGATGGCGGGCGGAGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑t‑tt                                   <  1:12583935/96‑2 (MQ=255)

  gTCTGGAAGTGATGGCGGGCGGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑t‑ttg                                  >  1:4370567/1‑94 (MQ=255)

  gTCTGGAAGTGATGGCGGGCGGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑t‑ttg                                  >  2:10400554/1‑94 (MQ=255)

  gTCTGGAAGTGATGGCGGGCGGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑t‑ttg                                  <  2:14390484/96‑3 (MQ=255)

  gTCTGGAAGTGATGGCGGGCGGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑t‑ttg                                  >  2:2478460/1‑94 (MQ=255)

   tCTGGAAGTGATGGCGGGCGGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑t‑ttgg                                 <  2:9061588/96‑4 (MQ=255)

   tCTGGAAGTGATGGCGGGCGGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑t‑ttgg                                 <  2:8962905/96‑4 (MQ=255)

   tCTGGAAGTGATGGCGGGCGGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑t‑ttgg                                 >  1:3449894/1‑93 (MQ=255)

    cTGGATGTGATGGCGGGCGGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑t‑ttggt                                <  1:4762551/96‑5 (MQ=255)

    cTGGAAGTGATGGCGGGCGGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑t‑ttggt                                >  2:446608/1‑92 (MQ=255)

    cTGGAAGTGATGGCGGGCGGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑t‑ttggt                                <  2:7567338/96‑5 (MQ=255)

          gTGATGGCGGGCGGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACggg                          <  2:1652144/96‑1 (MQ=255)

           tGATGGCGGGCGGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGa                         >  2:5270993/1‑96 (MQ=255)

            gATGGCGGGCGGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCGCT‑TG‑GTGACGGGAt                        <  1:10980536/96‑1 (MQ=255)

            gATGGCGGGCGGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGAt                        <  1:11217018/96‑1 (MQ=255)

            gATGGCGGGCGGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGAt                        <  2:6878174/96‑1 (MQ=255)

            gATGGCGGGCGGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGAt                        <  2:1225594/96‑1 (MQ=255)

            gATGGCGGGCGGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGAGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGAt                        <  2:1017290/96‑1 (MQ=255)

             aTGGCGGGCGGCGTTTCAAA‑AGGCCGTGCGCTGGACGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTGTTGCG‑T‑TTGGTGACGGGATg                       <  2:6118481/96‑1 (MQ=255)

             aTGGCGGGCGGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATg                       <  2:354043/96‑1 (MQ=255)

               ggcgggcgGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGACGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGTTGaa                     >  1:12912062/1‑96 (MQ=255)

               ggcgggcgGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGaa                     <  1:13237122/96‑1 (MQ=255)

               ggcgggcgGCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGaa                     <  1:13138591/96‑1 (MQ=255)

                gcgggcggCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAac                    <  1:5164257/96‑1 (MQ=255)

                gcgggcggCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAac                    <  2:8316868/96‑1 (MQ=255)

                gcgggcggCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAac                    <  2:9643586/96‑1 (MQ=255)

                gcgggcggCGTTTCAAA‑AGGACATGCCCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAac                    <  1:7028547/96‑1 (MQ=255)

                 cgggcggCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGCAGGATT‑GTAGTGCG‑T‑TTGGTGACGGGATGAacg                   >  1:10184571/1‑96 (MQ=255)

                 cgggcggCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAacg                   <  1:4331098/96‑1 (MQ=255)

                 cgggcggCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAacg                   <  1:13978146/96‑1 (MQ=255)

                 cgggcggCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAacg                   <  1:7580615/96‑1 (MQ=255)

                  gggcggCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAGGGATTGG‑ATTGCT‑T‑TTGGTGACGGGATGAacga                  >  1:12230156/1‑96 (MQ=255)

                  gggcggCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAacga                  >  2:6681137/1‑96 (MQ=255)

                  gggcggCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAacga                  >  2:8797669/1‑96 (MQ=255)

                  gggcggCGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAacga                  >  1:6278348/1‑96 (MQ=255)

                  gggcggCGTTTCAAA‑ACGCCATGAGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAacga                  <  1:10357255/96‑1 (MQ=255)

                  gggcggCGTGTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAacga                  <  1:380389/96‑1 (MQ=255)

                   ggcggcGTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAacgac                 >  1:12862918/1‑96 (MQ=255)

                   ggcggcGTTTCAAA‑AGGCCATGCGCTGGAAGCGGGGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAacgac                 >  1:1566776/1‑96 (MQ=255)

                   ggcggcGTATCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACT‑GAGCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAacgtc                 <  1:7369695/96‑3 (MQ=255)

                    gcggcgTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAacgacg                >  1:9124624/1‑96 (MQ=255)

                    gcggcgTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAacgacg                <  2:12997738/96‑1 (MQ=255)

                     cggcgTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGc               >  1:7288324/1‑96 (MQ=255)

                     cggcgTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGc               >  2:7099164/1‑96 (MQ=255)

                     cggcgTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGc               >  1:8004230/1‑96 (MQ=255)

                      ggcgTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGcc              >  1:7394350/1‑96 (MQ=255)

                      ggcgTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGcc              >  2:1926599/1‑96 (MQ=255)

                      ggcgTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGcc              <  1:6889931/96‑1 (MQ=255)

                      ggcgTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGcc              <  2:2102374/96‑1 (MQ=255)

                      ggcgTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGcc              <  1:3236505/96‑1 (MQ=255)

                      ggcgTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGcc              >  2:9549929/1‑96 (MQ=255)

                       gcgTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCg             >  2:4457700/1‑96 (MQ=255)

                        cgTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGa            >  1:4703266/1‑96 (MQ=255)

                        cgTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGa            <  2:11320077/96‑1 (MQ=255)

                        cgTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGa            >  1:4288595/1‑96 (MQ=255)

                         gTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGaa           >  1:9739297/1‑96 (MQ=255)

                         gTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGaa           >  2:6175746/1‑96 (MQ=255)

                         gTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGaa           >  2:13238161/1‑96 (MQ=255)

                         gTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGaa           <  2:5625116/96‑1 (MQ=255)

                         gTTTCAAA‑AGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGaa           >  1:1305043/1‑96 (MQ=255)

                          tttC‑AAGAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGaaa          >  2:13678874/1‑96 (MQ=255)

                           ttcaaa‑aGGCCATGCTCTGGAAGCGATGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAAt         <  2:7998724/92‑1 (MQ=255)

                           ttcaaa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAAt         >  2:10500537/5‑96 (MQ=255)

                           ttcaaa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAAt         >  2:9500971/5‑96 (MQ=255)

                           ttcaaa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAAt         >  1:3199527/5‑96 (MQ=255)

                           ttcaaa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAAt         <  2:5010472/92‑1 (MQ=255)

                           ttcaaa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAAt         <  1:1861003/92‑1 (MQ=255)

                           ttcaaa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAAt         >  2:4221818/5‑96 (MQ=255)

                           ttcaaa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAAt         <  2:10664278/92‑1 (MQ=255)

                            tcaaa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGTTT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATg        >  1:2924063/4‑96 (MQ=255)

                            tcaaa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATg        >  2:10076470/4‑96 (MQ=255)

                            tcaaa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATg        >  1:13414290/4‑96 (MQ=255)

                            tcaaa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATg        >  1:8635278/4‑96 (MQ=255)

                            tcaaa‑aGGCCATGCGCTGGAAGCAGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATg        <  1:10058740/93‑1 (MQ=255)

                             caaa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAG‑CATGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATGc       >  1:2711779/3‑96 (MQ=255)

                              aaa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAAGGACGCGGAAATGCt      >  1:1281826/2‑96 (MQ=255)

                              aaa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATGca      <  1:4128963/95‑2 (MQ=255)

                              aaa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATGCt      <  2:2600527/95‑1 (MQ=255)

                              aaa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATGCt      >  2:1473711/2‑96 (MQ=255)

                              aaa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATGCt      >  1:3482551/2‑96 (MQ=255)

                              aaa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATGCt      <  2:7778621/95‑1 (MQ=255)

                              aaa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGAAGCCGAAATGCt      >  1:2024656/2‑96 (MQ=255)

                               aa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATGCTg     >  2:1863708/1‑96 (MQ=255)

                               aa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATGCTg     <  1:14256729/96‑1 (MQ=255)

                               aa‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATGCTg     >  1:7888015/1‑96 (MQ=255)

                                a‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATGCTGt    <  2:733867/96‑1 (MQ=255)

                                a‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATGCTGt    <  1:4934091/96‑1 (MQ=255)

                                a‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATGCTGt    <  1:5889603/96‑1 (MQ=255)

                                a‑aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATGCTGt    <  1:11572494/96‑1 (MQ=255)

                                  aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑TCTG‑GTGACGGGATGAACGACGCCGAAATGCTGTc   <  1:9429715/96‑1 (MQ=255)

                                  aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTc   >  2:8011587/1‑96 (MQ=255)

                                  aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTc   >  1:6322331/1‑96 (MQ=255)

                                  aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTc   >  1:106104/1‑96 (MQ=255)

                                  aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTc   >  1:3023630/1‑96 (MQ=255)

                                  aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTc   <  2:13878938/96‑1 (MQ=255)

                                  aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTc   <  1:1745716/96‑1 (MQ=255)

                                  aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGG‑GCTACAGCC‑TGAAGGATT‑GTATTGCG‑T‑TTGGTGACGGGATGAACGACGCCGAAATGCTGTc   >  1:4364937/1‑96 (MQ=255)

CTGTCTGGAAGTGATGGCGGGCGGCGTTTC‑AA‑AGGCCATGCGCTGGAAG‑GCTGGCG‑‑‑‑AACT‑G‑GCTACAG‑C‑TGAAGGATT‑G‑ATTGCG‑T‑T‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCG  >  NC_000913/4008343‑4008461

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`