| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,980,940 | +C | coding (1/363 nt) coding (627/627 nt) |
araH ← araH ← |
ABC‑type arabinose transport system permease component ABC‑type arabinose transport system permease component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,980,939 | 1 | . | C | 97.1% | 1407.3 / 25.6 | 379 | coding (2/363 nt) | araH | ABC‑type arabinose transport system permease component |
| Reads supporting (aligned to +/- strand): ref base . (6/5); new base C (227/139); total (235/144) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 423 total aligned reads displayed.
AAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑G‑C‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAG > NC_000913/1980844‑1981029 | gCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑G‑cc < 2:14385196/96‑2 (MQ=255) cAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑G‑cctc > 1:7879866/1‑93 (MQ=255) aataatTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTc > 2:1209927/1‑96 (MQ=255) aataatTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTc < 2:4539975/96‑1 (MQ=255) ataatTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCg > 2:527548/1‑96 (MQ=255) taatTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGt < 2:7209948/96‑1 (MQ=255) taatTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGt > 1:3112928/1‑96 (MQ=255) taatTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAAGAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGt > 2:12885966/1‑96 (MQ=255) aatTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGtt > 1:9890821/1‑96 (MQ=255) ccGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCg > 1:5858348/1‑96 (MQ=255) cGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCTAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGc > 1:7030376/1‑96 (MQ=255) gCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCa < 2:13410016/96‑1 (MQ=255) gCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCa > 1:12049542/1‑96 (MQ=255) tATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAAt > 2:180980/1‑96 (MQ=255) tATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAAt > 1:4598399/1‑96 (MQ=255) aTCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATc < 1:7611967/96‑1 (MQ=255) aTCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATc < 1:2009925/96‑1 (MQ=255) tCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCg > 2:4466355/1‑96 (MQ=255) cgcgGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACACCCGGTCCACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGc < 2:9708906/96‑1 (MQ=255) gatGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGcc > 1:11074376/3‑96 (MQ=255) tACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGgt > 2:2866649/1‑96 (MQ=255) tACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGgt > 1:7693256/1‑96 (MQ=255) cccAGGCCTGAGAGAAAAAAGATAATAATTTTGGGGCGAACAACCGGTCCACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGgtg < 1:3729262/95‑1 (MQ=255) aCCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGgtg > 1:4268144/1‑96 (MQ=255) ccAGGCCTGAGAGAACAAAGATAATAATTTCGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGgtgt < 2:11661544/96‑1 (MQ=255) aGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACACCCGGTACCCCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTa < 2:11084177/96‑1 (MQ=255) aGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTa > 2:2152126/1‑96 (MQ=255) gCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACCCCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACg < 1:11755828/96‑1 (MQ=255) gCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACg > 2:2936642/1‑96 (MQ=255) gCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACg > 1:1413405/1‑96 (MQ=255) ccTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGTTACACCCGCCAGACGCGCG‑GCC‑TCTTCTTTCCCGCCAATCGCCAGGGTGATACGa > 2:14232084/1‑96 (MQ=255) tGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGAcc > 2:8054629/1‑96 (MQ=255) tGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGAcc > 1:2232003/1‑96 (MQ=255) agagaACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑G‑CATCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCag > 1:13303445/1‑95 (MQ=255) agaACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAg < 2:69528/96‑1 (MQ=255) gaACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAgg > 2:6650928/1‑96 (MQ=255) gaACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAgg > 1:5542351/1‑96 (MQ=255) accAAAGATAATAATTTTGGTGCGAACACCCGGTACCCCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggt < 2:9503729/94‑1 (MQ=255) aaCAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggt > 1:6277688/1‑96 (MQ=255) aaCAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggt > 1:1086615/1‑96 (MQ=255) aCAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtg > 1:2638529/1‑96 (MQ=255) cAAAGATAATAATTTAGGTGCGACCAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtgg < 1:12226383/96‑1 (MQ=255) aaaGATAATAATTTTGGTGCGAACAACCGGTACACCCGCTAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAAGCGCCAGGGTGTTACGACCAAAggtggt > 1:7169162/1‑96 (MQ=255) aaaGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtggt > 2:14430906/1‑96 (MQ=255) gATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGtttt > 2:1318578/1‑96 (MQ=255) ataataATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTa > 2:2682205/1‑96 (MQ=255) taataaTTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTAt > 1:4963073/1‑96 (MQ=255) taatTTTGGTGCGAACACCCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTca < 2:10962580/96‑1 (MQ=255) taatTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTca > 2:13052996/1‑96 (MQ=255) aatTTTGGTGCGAACAACCGGTACCCCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcat < 1:8874119/96‑2 (MQ=255) aatTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcag > 2:6727905/1‑96 (MQ=255) aatTTTGGTGCGAACAACCGGTACACCAGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCAAGGGTGTTTCGACCAAAGGTGGTTTTATTaag > 1:10069690/1‑96 (MQ=255) atTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcagc > 2:7630607/1‑96 (MQ=255) ttttGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcacaa > 1:10414767/1‑93 (MQ=255) tttGGTGCGAACAACCGTTACCCCCGCCAGACGCGCGTC‑C‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcagcag < 1:12668043/96‑1 (MQ=255) tttGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcagcag > 1:7319835/1‑96 (MQ=255) ttGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGGGTTACGACCAAAGGTGGTTTTATTCggcagc > 2:13751513/1‑96 (MQ=255) ggTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCaa > 1:8227221/1‑96 (MQ=255) gTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCaaa > 2:5012485/1‑96 (MQ=255) gCGAACAACCGGCACATCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAAcc < 1:12818442/96‑1 (MQ=255) ggAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCCGCAAAcaa < 1:12994004/95‑3 (MQ=255) cGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCa > 1:3969636/1‑96 (MQ=255) gAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGGGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCaa > 2:11298293/1‑96 (MQ=255) aaacaacCGGTACGCCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCaa > 1:11386453/2‑96 (MQ=255) agccGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGAt > 1:10590376/3‑96 (MQ=255) aacCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGAGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGAt > 2:8599241/1‑96 (MQ=255) ccGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATaa > 1:6020073/1‑96 (MQ=255) cGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAAt > 2:3525489/1‑96 (MQ=255) cGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAAt > 1:5272660/1‑96 (MQ=255) ggTCCACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATc < 1:4694652/96‑1 (MQ=255) ggTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATc > 2:9922249/1‑96 (MQ=255) ggTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATc > 1:1345125/1‑96 (MQ=255) ggTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATc > 1:2905508/1‑96 (MQ=255) gTACCCCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCa < 2:12515531/96‑1 (MQ=255) gTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCa > 2:9015924/1‑96 (MQ=255) tACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAg < 2:8417053/96‑1 (MQ=255) tACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAg > 2:10059256/1‑96 (MQ=255) tACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGGGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCACAGATAATCAg > 2:10728195/1‑96 (MQ=255) acacCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGa < 1:13801327/96‑1 (MQ=255) cgcccGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGac > 1:9033867/3‑96 (MQ=255) acCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGaca > 1:6498156/1‑96 (MQ=255) acCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTGTTATTCAGCAGCAAACCAAAGATAATCAGaca > 1:2486355/1‑96 (MQ=255) acCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGGGGTTTTATTCAGCAGCAAACCAAAGATAATCAGaca > 2:11392038/1‑96 (MQ=255) cccGCCAGACGCGCG‑GCC‑TCTGCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGacac < 2:10474710/96‑1 (MQ=255) ccGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACAcg < 2:2543672/96‑1 (MQ=255) ccGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACAcg < 2:5542351/96‑1 (MQ=255) ccGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACAcg < 2:10276672/96‑1 (MQ=255) cGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACAcgc > 2:3254322/1‑96 (MQ=255) ccAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGa > 2:12281143/1‑96 (MQ=255) cAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGAc > 1:358564/1‑96 (MQ=255) aGACGCGCGCC‑C‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACg < 2:5863056/96‑1 (MQ=255) aGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACg > 2:9834426/1‑96 (MQ=255) gACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACgg > 2:6871090/1‑96 (MQ=255) gACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACgg < 2:3730413/96‑1 (MQ=255) gACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACgg > 1:1912213/1‑96 (MQ=255) aCGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGAGTGTTACGACCAAAGGTGGTTTTATTCAGCATCAAACCAAAGATAATCAGACACGCGACGGt > 2:14093102/1‑96 (MQ=255) cgcgcg‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTg < 2:1397917/96‑1 (MQ=255) gcgcg‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGa > 2:6383473/1‑96 (MQ=255) gcgcg‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGa < 1:9494090/96‑1 (MQ=255) cgcg‑GCC‑TCTTCGTCCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAg < 1:6730896/96‑1 (MQ=255) | AAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑G‑C‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAG > NC_000913/1980844‑1981029 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |