BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,008,480	+A	coding (637/654 nt)	yedK →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,008,476	1	.	A	98.6%	1674.1 / 11.5	422	coding (633/654 nt)	yedK	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (1/5); new base A (210/206); total (211/211)
Fisher's exact test for biased strand distribution p-value = 2.15e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.47e-01

Only 100 of 480 total aligned reads displayed.

ATTAGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑AAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGAC  >  NC_000913/2008381‑2008566

aTTAGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGtt                                                                                             <  1:10990543/96‑1 (MQ=255)

aTTAGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGtt                                                                                             <  2:9254340/96‑1 (MQ=255)

aTTAGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGtt                                                                                             >  2:1351260/1‑96 (MQ=255)

aTTAGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGGAATGtt                                                                                             >  1:6686634/1‑96 (MQ=255)

 ttAGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑a                                                                                           <  2:6967976/96‑1 (MQ=255)

   aGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaa                                                                                         <  1:7863604/96‑1 (MQ=255)

   aGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaa                                                                                         <  2:6604689/96‑1 (MQ=255)

   aGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaa                                                                                         >  1:7687470/1‑96 (MQ=255)

   aGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCCCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaa                                                                                         <  2:8289600/96‑1 (MQ=255)

    gCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaaa                                                                                        >  2:12163467/1‑96 (MQ=255)

     cGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaaaa                                                                                       >  1:2930451/1‑95 (MQ=255)

        tAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaaaacca                                                                                    <  2:11515450/96‑5 (MQ=255)

        tAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaaaacca                                                                                    <  2:2562680/96‑5 (MQ=255)

        tAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaaaacca                                                                                    <  1:13634537/96‑5 (MQ=255)

        tAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑aaaaacca                                                                                    >  1:9150618/1‑92 (MQ=255)

          aagaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAgg                                                                                   <  1:5356737/96‑1 (MQ=255)

           agaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAggg                                                                                  <  1:13923757/96‑1 (MQ=255)

           agaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAggg                                                                                  >  1:2277280/1‑96 (MQ=255)

           agaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAggg                                                                                  <  1:4572217/96‑1 (MQ=255)

            gaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGgc                                                                                 >  2:4303138/1‑96 (MQ=255)

            gaagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGgc                                                                                 >  2:2550530/1‑96 (MQ=255)

            gaagCCTCAGAAATCGCGGCCAGAGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACTCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGgc                                                                                 <  2:10162700/96‑1 (MQ=255)

             aagCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGgcg                                                                                >  1:13221555/1‑96 (MQ=255)

              agCCTCAGAAATCGCGGCCCGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGgctc                                                                               <  1:3818863/96‑3 (MQ=255)

               gCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGcgcg                                                                              <  2:3224226/96‑1 (MQ=255)

               gCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGcgcg                                                                              >  2:14279267/1‑96 (MQ=255)

               gCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGcgcg                                                                              >  2:10923189/1‑96 (MQ=255)

               gCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGcgcg                                                                              >  1:8706141/1‑96 (MQ=255)

                 cTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGa                                                                            >  2:973229/1‑96 (MQ=255)

                 cTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGa                                                                            <  2:2760202/96‑1 (MQ=255)

                  ccAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAg                                                                           <  1:6283605/95‑1 (MQ=255)

                    aGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGtt                                                                         <  2:5821935/96‑1 (MQ=255)

                     gAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTa                                                                        <  1:2122208/96‑1 (MQ=255)

                      aaaTCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTaa                                                                       <  1:7087718/96‑1 (MQ=255)

                          cgcgGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCa                                                                   >  1:12005616/1‑96 (MQ=255)

                          cgcgGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCa                                                                   >  1:3232865/1‑96 (MQ=255)

                          cgcgGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCa                                                                   >  2:3434869/1‑96 (MQ=255)

                          cgcgGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGGATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCa                                                                   >  2:12525525/1‑96 (MQ=255)

                             ggCCAGTGGCTGTGTTCCAGCAAGCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAAcc                                                                <  1:5886205/96‑1 (MQ=255)

                             ggCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAAcc                                                                >  2:1900042/1‑96 (MQ=255)

                              gCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCt                                                               <  2:12274632/96‑1 (MQ=255)

                              gCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCt                                                               >  1:10017823/1‑96 (MQ=255)

                              gCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCt                                                               <  1:5252704/96‑1 (MQ=255)

                                ccatGGCTGGTTTTCAGCAAACCCGTTCTCCCGGCAACCGGTAACGGCCCCGGTGGGTAATGTTAAAAACCAAGGCGCGGAGTTAATTCAACCTGt                                                             <  2:6141488/93‑1 (MQ=255)

                                 aGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGtt                                                            >  2:4147528/1‑96 (MQ=255)

                                 aGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGtt                                                            >  1:248755/1‑96 (MQ=255)

                                  gTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGttt                                                           <  1:10125762/96‑1 (MQ=255)

                                  gTGGCTGTGTGCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGttt                                                           <  1:9698152/96‑1 (MQ=255)

                                       tgtgTTTCAGCAAACCAGTTCTCCTGGCACACGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATaa                                                      <  2:12795218/96‑1 (MQ=255)

                                       tgtgTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATaa                                                      <  2:7016085/96‑1 (MQ=255)

                                        gtgtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAg                                                     <  1:5057512/96‑1 (MQ=255)

                                         tgtTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGc                                                    >  1:9880216/1‑96 (MQ=255)

                                           ttCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCt                                                  <  2:13846422/96‑1 (MQ=255)

                                            tCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTg                                                 >  2:292761/1‑96 (MQ=255)

                                              cAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGga                                               >  2:8560962/1‑96 (MQ=255)

                                                 cAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGat                                            >  1:467947/1‑96 (MQ=255)

                                                  aaaCCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGatt                                           <  1:3624424/96‑1 (MQ=255)

                                                      cAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTg                                       >  1:7260309/1‑96 (MQ=255)

                                                      cAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGCAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTg                                       >  2:7851295/1‑96 (MQ=255)

                                                       aGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGa                                      <  2:528084/96‑1 (MQ=255)

                                                        gTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGAt                                     <  1:12177831/96‑1 (MQ=255)

                                                        gTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGAt                                     <  1:1900042/96‑1 (MQ=255)

                                                         ttCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATc                                    <  2:3914858/96‑1 (MQ=255)

                                                            tcCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATcaac                                 >  2:946760/1‑96 (MQ=255)

                                                            tcCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATcaac                                 >  2:13106873/1‑96 (MQ=255)

                                                               tGGGACCCGGTATCGCGCGCAGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCACCCTGTTTGATAAGCCTGGAGATTATTGATcaacaan                              <  1:4915798/96‑2 (MQ=255)

                                                               tGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAAt                              >  2:770088/1‑96 (MQ=255)

                                                                 gCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATAc                            <  2:12343091/96‑1 (MQ=255)

                                                                  cACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACt                           >  2:7973593/1‑96 (MQ=255)

                                                                   aCCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTg                          >  2:11334288/1‑96 (MQ=255)

                                                                   aCCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTg                          >  2:5536664/1‑96 (MQ=255)

                                                                    cccGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGc                         >  2:49576/1‑96 (MQ=255)

                                                                     ccGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTgag                        <  1:10540626/96‑3 (MQ=255)

                                                                     ccGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCg                        >  2:8813191/1‑96 (MQ=255)

                                                                     ccGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCg                        <  2:2474692/96‑1 (MQ=255)

                                                                     ccGGTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCg                        >  1:5672779/1‑96 (MQ=255)

                                                                       ggTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTc                      >  1:11435361/1‑96 (MQ=255)

                                                                       ggTATCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTc                      >  1:7487424/1‑96 (MQ=255)

                                                                         tATCGCGCGCGGGGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCAt                    >  1:9321224/1‑96 (MQ=255)

                                                                          aTCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATa                   <  2:1779825/96‑1 (MQ=255)

                                                                           tCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATaa                  <  2:13284016/96‑1 (MQ=255)

                                                                           tCGCGCGCGGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATaa                  <  1:12397014/96‑1 (MQ=255)

                                                                            cgctcgtgGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGACTGGAGATTATTGATCAACAATACTGCGTCATAAg                 <  1:4349041/96‑1 (MQ=255)

                                                                            cgcgcgcgGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAg                 <  1:13811861/96‑1 (MQ=255)

                                                                             gcgcgcgGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGa                >  2:11864863/1‑96 (MQ=255)

                                                                              cgcgcgGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGaa               >  2:14177493/1‑96 (MQ=255)

                                                                               gcgcgGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGaaa              <  2:6408953/96‑1 (MQ=255)

                                                                                cgcgGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAt             <  2:4749950/96‑1 (MQ=255)

                                                                                 gcgGTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtc            >  1:11268970/1‑96 (MQ=255)

                                                                                 gcgGGGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtc            >  2:7329512/1‑96 (MQ=255)

                                                                                   ggTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtctc          <  1:12686258/96‑1 (MQ=255)

                                                                                   ggTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAAtctc          <  1:14194957/96‑1 (MQ=255)

                                                                                    gTGGGTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATctct         >  1:1618073/1‑96 (MQ=255)

                                                                                       ggTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAtt      <  1:5621237/96‑1 (MQ=255)

                                                                                       ggTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTAtt      >  1:9020925/1‑96 (MQ=255)

                                                                                        gTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTa     <  2:2218890/96‑1 (MQ=255)

                                                                                        gTAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTa     <  1:4182209/96‑1 (MQ=255)

                                                                                         tAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAg    >  2:3632841/1‑96 (MQ=255)

                                                                                         tAATGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAg    >  1:616017/1‑96 (MQ=255)

                                                                                           aTGTTAAAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGAc  >  2:10380212/1‑96 (MQ=255)

ATTAGCGGTAAAGAAGCCTCAGAAATCGCGGCCAGTGGCTGTGTTCCAGCAAACCAGTTCTCCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTT‑AAAACCAGGGCGCGGAGTTAATTCAACCTGTTTGATAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGAAATCTCTATTAGAC  >  NC_000913/2008381‑2008566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`