New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3224879 =418 (0.720)37 (0.070) 10/180 39.8 7.7% coding (1005/1434 nt) ygjI putative oxidoreductase
?NC_000913 3297267 = 495 (0.910)coding (290/444 nt) yhbP hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 459 total aligned reads displayed.

CAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTA  >  NC_000913/3224788‑3224973
                                                                                           |                                                                                               
cAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAg                                                                                            >  2:7400729/1‑96 (MQ=255)
 aaCGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGc                                                                                           >  2:1746675/1‑96 (MQ=255)
   cGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGt                                                                                         <  2:10372573/96‑1 (MQ=255)
    gCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTg                                                                                        >  1:453630/1‑96 (MQ=255)
    gCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTg                                                                                        <  2:6178956/96‑1 (MQ=255)
    gCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGGAAGAAAACCGTCGAACTGAACGAAAACGGCATTACGGCGC‑GCGCACCGTg                                                                                        >  1:2479682/1‑96 (MQ=255)
       ggTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGTACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGAt                                                                                     >  2:4159130/1‑96 (MQ=255)
       ggTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGAt                                                                                     <  1:5453931/96‑1 (MQ=255)
       ggTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGAt                                                                                     <  2:12509163/96‑1 (MQ=255)
       agTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGAt                                                                                     >  1:11280519/2‑96 (MQ=255)
         tGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATcc                                                                                   <  1:14218160/96‑1 (MQ=255)
          gAAAATTTTCTTCTCCGAACTCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCa                                                                                  <  1:10001627/96‑1 (MQ=255)
          gAAAATTTTCTTCTCCGAAATCCAGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCa                                                                                  <  1:7849666/96‑1 (MQ=255)
              aTTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTc                                                                              <  1:12031454/96‑1 (MQ=255)
               ttttCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGtttc                                                                             <  1:3412799/96‑3 (MQ=255)
               ttttCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTcc                                                                             >  1:10177094/1‑96 (MQ=255)
                  tcttctCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGa                                                                          <  2:2923923/96‑1 (MQ=255)
                    ttctCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATc                                                                        >  2:9848749/1‑96 (MQ=255)
                    tactcCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATc                                                                        <  1:12879836/94‑1 (MQ=255)
                     tctcCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTGCCTGATCg                                                                       >  1:1430426/1‑96 (MQ=255)
                         cGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCAt                                                                   <  1:3725553/96‑1 (MQ=255)
                            aaTCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAATTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATccc                                                                <  2:12223491/96‑1 (MQ=255)
                            aaTCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATccc                                                                >  2:2157520/1‑96 (MQ=255)
                            aaTCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATccc                                                                >  2:12037895/1‑96 (MQ=255)
                            aaTCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATccc                                                                <  1:13493573/96‑1 (MQ=255)
                             aTCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCg                                                               >  1:941936/1‑96 (MQ=255)
                             aTCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCg                                                               >  1:4754494/1‑96 (MQ=255)
                             aTCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTGCCTGATCGTCATCCCg                                                               >  1:12805410/1‑96 (MQ=255)
                               cccGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCt                                                             <  2:13641554/96‑1 (MQ=255)
                                ccGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCtg                                                            >  2:3037341/1‑96 (MQ=255)
                                ccGGAAGGCATCTTTGGTAAGAAAACCGGCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCtg                                                            >  2:9583312/1‑96 (MQ=255)
                                 cGGAAGGCATCTTTGGTAAGAAAACCGTCGACCTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCtga                                                           <  2:1876143/96‑1 (MQ=255)
                                 cGGAAGCCATCTTTGGTACGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCtga                                                           <  1:6629672/96‑1 (MQ=255)
                                   gAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCtgatg                                                         >  2:5883588/1‑96 (MQ=255)
                                   gAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCtgatg                                                         <  2:634580/96‑1 (MQ=255)
                                   gAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCtgatg                                                         >  1:13865293/1‑96 (MQ=255)
                                    aaGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATGCCGCtgatga                                                        >  2:13191100/1‑96 (MQ=255)
                                    aaGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCtgatga                                                        >  2:1533883/1‑96 (MQ=255)
                                        cATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGTTCCAGTTCCTGATCGTCATCCCGCTGATGATTAt                                                    <  1:6142054/96‑1 (MQ=255)
                                        cATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAt                                                    >  1:11564689/1‑96 (MQ=255)
                                         aTCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCGGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTGATCCCGCTGATGATTAT‑c                                                  >  1:4288689/1‑96 (MQ=255)
                                          tCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑cc                                                 >  1:6405268/1‑96 (MQ=255)
                                           cTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑cct                                                <  1:11439450/96‑2 (MQ=255)
                                            tttGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑CCgg                                               <  1:11788762/96‑2 (MQ=255)
                                              tGGTAAGAACACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑cccgat                                             <  1:3085767/96‑5 (MQ=255)
                                              tGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑cccgat                                             <  1:4159130/96‑5 (MQ=255)
                                                gTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGc                                            >  2:7743517/1‑96 (MQ=255)
                                                 tAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCt                                           >  2:11071926/1‑96 (MQ=255)
                                                  aaGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTc                                          <  2:3481925/96‑1 (MQ=255)
                                                  aaGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTc                                          <  2:10147526/96‑1 (MQ=255)
                                                  aaGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGCCATCCCGCTGATGAGGATCCCGATGCTc                                          >  2:13569737/1‑96 (MQ=255)
                                                   aGAAACCCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCg                                         <  1:1559121/96‑1 (MQ=255)
                                                   aGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCg                                         >  2:10764202/1‑96 (MQ=255)
                                                     aaaaCCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGt                                       >  1:2543352/1‑96 (MQ=255)
                                                     aaaaCCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGt                                       >  2:9046973/1‑96 (MQ=255)
                                                        aCCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTcc                                    <  1:10728663/96‑1 (MQ=255)
                                                        aCCGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑CCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTcc                                    <  1:8276472/96‑1 (MQ=255)
                                                          cGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCaa                                  >  1:7253510/1‑96 (MQ=255)
                                                          cGTCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGAGTATCCCGATGCTCTGTTCCaa                                  >  1:3269013/1‑96 (MQ=255)
                                                            tCGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATa                                <  1:9848749/96‑1 (MQ=255)
                                                             cGAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATAc                               <  2:811783/96‑1 (MQ=255)
                                                              gAACTGTACGAAAACGGCGTTCCGGGGC‑GCGCAGGGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATAcc                              <  2:12785670/96‑1 (MQ=255)
                                                              gAACTGAACGAACACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATAcc                              >  1:5111647/1‑96 (MQ=255)
                                                              gAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATAcc                              <  2:14148551/96‑1 (MQ=255)
                                                              gAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATAcc                              <  2:4336889/96‑1 (MQ=255)
                                                              gAACTGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATAcc                              >  2:1176955/1‑96 (MQ=255)
                                                                  tGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGc                          <  2:11626676/96‑1 (MQ=255)
                                                                  tGAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGc                          <  2:7637981/96‑1 (MQ=255)
                                                                   gAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCa                         <  1:12382910/96‑1 (MQ=255)
                                                                   gAACGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCa                         >  1:7451278/1‑96 (MQ=255)
                                                                    aaCGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAg                        >  2:2732108/1‑96 (MQ=255)
                                                                    aaCGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAg                        <  2:3590671/96‑1 (MQ=255)
                                                                    aaCGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAg                        <  2:9396627/96‑1 (MQ=255)
                                                                    aaCGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAg                        <  2:8298827/96‑1 (MQ=255)
                                                                     aCGAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAgg                       <  1:838234/96‑1 (MQ=255)
                                                                       gAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGAt                     >  1:2306895/1‑96 (MQ=255)
                                                                       gAAAACGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGAt                     >  2:5558010/1‑96 (MQ=255)
                                                                       gAAAACGCCGTTCCGCAGC‑GCGCAGCGCGGATCCAGTTCCTGATAGTCACCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGAt                     <  2:12918397/96‑1 (MQ=255)
                                                                        agaaCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATc                    <  1:1199004/94‑1 (MQ=255)
                                                                        aaaaCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCTGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGacc                    <  1:13016792/96‑3 (MQ=255)
                                                                          aaCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtg                  <  1:6975317/96‑1 (MQ=255)
                                                                          aaCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtg                  >  1:13655574/1‑96 (MQ=255)
                                                                          aaCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtg                  <  2:3340033/96‑1 (MQ=255)
                                                                          aaCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtg                  <  2:2543352/96‑1 (MQ=255)
                                                                           aCGGCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtga                 >  2:4501181/1‑96 (MQ=255)
                                                                             ggCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtgatg               <  1:9942972/96‑1 (MQ=255)
                                                                             ggCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtgatg               >  2:1135760/1‑96 (MQ=255)
                                                                              gCGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCtgatga              <  2:4841046/96‑1 (MQ=255)
                                                                               cGTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGaa             >  2:4016610/1‑96 (MQ=255)
                                                                                gTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAAt            >  2:5024314/1‑96 (MQ=255)
                                                                                gTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAAt            >  2:14433750/1‑96 (MQ=255)
                                                                                gTTCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAAt            >  2:8645631/1‑96 (MQ=255)
                                                                                 ttCCGGCGC‑GCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATa           >  2:6675614/1‑96 (MQ=255)
                                                                                     ggcgc‑gcgcaGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACtat       >  1:13237012/1‑96 (MQ=255)
                                                                                     ggcgc‑gcgcaGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGCGCAGGATCTGATGAATACtat       >  1:1914657/1‑96 (MQ=255)
                                                                                        cgcgcgcAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACtatta     <  1:806359/93‑1 (MQ=255)
                                                                                          cgcgcAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTattatt   <  2:7234861/95‑1 (MQ=255)
                                                                                          cgcgcAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTattatt   <  1:5886416/95‑1 (MQ=255)
                                                                                           gcgcAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTAttatta  >  1:9276116/1‑96 (MQ=255)
                                                                                           gcgcAGCGTGGATCAAGTTCCTGATCGTCACCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTAttatta  <  1:873949/96‑1 (MQ=255)
                                                                                           |                                                                                               
CAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTAT‑CCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTA  >  NC_000913/3224788‑3224973

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.